BAC Information

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BAC

Clone NameB6Ng01-297E01
Chromosome4 (Build37)
Map Location 67,978,934 - 67,980,118
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039379, Hmgb1-rs18, LOC433715, Tcp1-ps1
Downstream geneDbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E01.bB6Ng01-297E01.g
ACCGA092655GA092656
length1,181511
definitionB6Ng01-297E01.b B6Ng01-297E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaacattctccttgcaaaggtgcacggcagcctcatgctctg
aatttagagtggaaatgggaactatttgtgcagttcagggaaaaaatgac
aaggaggcaaaaaaaattaattaatttaaaaggccctggtaccatggata
cctttgtaaaaaacaaaatgaaaaaaaaatcatccttatgctgccctgag
aataagctcaaaaaatagttcttttgcatcccttctatttaatcattcta
aatggagatcttgtacctggactattagccatattttaaaattgatgaag
tgaactatccaacaataatatgtaaacagtttcccaaacactaaactgat
ccgttcggtatgcttgttaagctgcccgactttagagaaatctatgacat
ttaaaaggaaaacattatactttccacacttcttatcattccagtaacgt
actatcatgtactaaatgggaaaacacattgttgttcatagcacgtcaag
ttcttaaagaagaaacaggaaaagaaggaaaaggcagggtgaaaggcaat
ggtagcaacaggttcaacaccaacgtgcatacagcaatgggtttccttgg
tgcatgttttcatcagtaaaagaggaagaaataaagtgtgaagtacagtg
tggtagattagtaacattacacttaagttaaagacttcaatattacatta
aatttagaaaaaaaatgggccctttcagttaaaaatggagtattcaaggg
gtatagagatggctcataagtgctggccatctttccacctgctttgaata
gtattttatctcaaaatttaaagcactgaacaactgagaaagccatgggc
attgacctccatcctctttgcatccctgaatacatgtacatacaaacatt
gaagaattaaactggcacacacaaaattacacacacatgcatacaaagat
atacttttagtttttccaatgtaattcttgtattgaaatctagtctaacg
taaatgtaatacatagtattattgctgtttaataaaaggaataagaccag
ctgttctgggaaaaatatttgttgaatacttttactttgtcaaaatataa
ataatattccattccaaacattttaagaggtatgaggaagaagtatgaag
gataccttcttgaataagttactattaaatg

ttcatgcctccttagaatagggaacaaaatacctataaaacgagttacat
agacaaagtttggagctgagatgaaaggatggaccatccagagactactc
ctcctggggtccatcccataatcagccaccaaaccaagacactattgcat
atgccagcaagattttgctgaagggaccctaatatagctgtcttgtatga
ggccatgccagtgcctggcaaatacagaagtggatgctcacagtcatcta
tcggatggaacacagggcccacaatggagaagctagagaaagcacccaag
gagctgaaggggtctgcaaccctataggtggagcaactatatgaactaac
cagtaccctcagagcttgtgtctctatctgcatgtgtagcagaagatggc
ctagtgggccatcattgggaactgtaaactttatatgccccagtacaggg
gaacgccagggccaagaagtgggagtgggtgggtaggggagcagggtgca
gcgagggtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_67978934_67980118
seq2: B6Ng01-297E01.b_47_1227 (reverse)

seq1  CATTTAATAAGTAACTTATTCAAGAAGGTTATCC-TCATAACTTCTTTCC  49
      |||||||| ||||||||||||||||||| ||||| |||| ||||| ||||
seq2  CATTTAAT-AGTAACTTATTCAAGAAGG-TATCCTTCAT-ACTTC-TTCC  46

seq1  TCATAACTCTTAAAAATGTTTTGAATTGGATTATTATTTATTTTTTGACA  99
      ||||| ||||| ||||||||| ||| |||| |||||||||| ||||||| 
seq2  TCATACCTCTT-AAAATGTTTGGAA-TGGAATATTATTTATATTTTGAC-  93

seq1  AAAGTAAAAGTATTC-ACAAATA-TTTTCCCAG-ACAGCTTGGTC-TATT  145
      ||||||||||||||| ||||||| ||||||||| ||||| ||||| ||||
seq2  AAAGTAAAAGTATTCAACAAATATTTTTCCCAGAACAGC-TGGTCTTATT  142

seq1  CCTTTTATTAAACAGCAATAATACTATGTATTACATTTACGTTAGACTAG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATTAAACAGCAATAATACTATGTATTACATTTACGTTAGACTAG  192

seq1  ATTTCAATACAAGAATTACATTGGAAAAACTAAAAGTATTATCTTTGTAT  245
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTCAATACAAGAATTACATTGGAAAAACTAAAAGTA-TATCTTTGTAT  241

seq1  GCATGTGTGTGTAATTTTGTGTGTGCCAGTTTAATTCTTCAATGTTTGTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTGTGTAATTTTGTGTGTGCCAGTTTAATTCTTCAATGTTTGTA  291

seq1  TGTACATGTATTCAGGGATGCAAAGAGGATGGAGGTCAATGCCCATGGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGTATTCAGGGATGCAAAGAGGATGGAGGTCAATGCCCATGGCT  341

seq1  TTCTCAGTTGTTCAGTGCCTTAAATTTTGAGATAAAATACTATTCAAAGC  395
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCTCAGTTGTTCAGTGCTTTAAATTTTGAGATAAAATACTATTCAAAGC  391

seq1  AGGTGGAAAGATGGCCAGCACTTATGAGCCATCTCTATACCCCTTGAATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAAAGATGGCCAGCACTTATGAGCCATCTCTATACCCCTTGAATA  441

seq1  CTCCATTTTTAACTGAAAGGGCCCATTTTTTTTCTAAATTTAATGTAATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTTTAACTGAAAGGGCCCATTTTTTTTCTAAATTTAATGTAATA  491

seq1  TTGAAGTCTTTAACTTAAGTGTAATGTTACTAATCTACCACACTGTACTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCTTTAACTTAAGTGTAATGTTACTAATCTACCACACTGTACTT  541

seq1  CACACTTTATTTCTTCCTCTTTTACTGATGAAAACATGCACCAAGGAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTATTTCTTCCTCTTTTACTGATGAAAACATGCACCAAGGAAAC  591

seq1  CCATTGCTGTATGCACGTTGGTGTTGAACCTGTTGCTACCATTGCCTTTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTGTATGCACGTTGGTGTTGAACCTGTTGCTACCATTGCCTTTC  641

seq1  ACCCTGCCTTTTCCTTCTTTTCCTGTTTCTTCTTTAAGAACTTGACGTGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCCTTTTCCTTCTTTTCCTGTTTCTTCTTTAAGAACTTGACGTGC  691

seq1  TATGAACAACAATGTGTTTTCCCATTTAGTACATGATAGTACGTTACTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACAACAATGTGTTTTCCCATTTAGTACATGATAGTACGTTACTGG  741

seq1  AATGATAAGAAGTGTGGAAAGTATAATGTTTTCCTTTTAAATGTCATAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAGAAGTGTGGAAAGTATAATGTTTTCCTTTTAAATGTCATAGA  791

seq1  TTTCTCTAAAGTCGGGCAGCTTAACAAGCATACCGAACGGATCAGTTTAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAAAGTCGGGCAGCTTAACAAGCATACCGAACGGATCAGTTTAG  841

seq1  TGTTTGGGAAACTGTTTACATATTATTGTTGGATAGTTCACTTCATCAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGAAACTGTTTACATATTATTGTTGGATAGTTCACTTCATCAAT  891

seq1  TTTAAAATATGGCTAATAGTCCAGGTACAAGATCTCCATTTAGAATGATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATGGCTAATAGTCCAGGTACAAGATCTCCATTTAGAATGATT  941

seq1  AAATAGAAGGGATGCAAAAGAACTATTTTTTGAGCTTATTCTCAGGGCAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGGGATGCAAAAGAACTATTTTTTGAGCTTATTCTCAGGGCAG  991

seq1  CATAAGGATGATTTTTTTTTCATTTTGTTTTTTACAAAGGTATCCATGGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGATGATTTTTTTTTCATTTTGTTTTTTACAAAGGTATCCATGGT  1041

seq1  ACCAGGGCCTTTTAAATTAATTAATTTTTTTTGCCTCCTTGTCATTTTTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGCCTTTTAAATTAATTAATTTTTTTTGCCTCCTTGTCATTTTTT  1091

seq1  CCCTGAACTGCACAAATAGTTCCCATTTCCACTCTAAATTCAGAGCATGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAACTGCACAAATAGTTCCCATTTCCACTCTAAATTCAGAGCATGA  1141

seq1  GGCTGCCGTGCACCTTTGCAAGGAGAATGTTAAAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCGTGCACCTTTGCAAGGAGAATGTTAAAGAATTC  1181


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