BAC Information

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BAC

Clone NameB6Ng01-297F15
Chromosome4 (Build37)
Map Location 90,073,347 - 90,074,843
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664785, Dmrta1, Zfp352, LOC619842, LOC435792
Downstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297F15.bB6Ng01-297F15.g
ACCGA092728GA092729
length1,121553
definitionB6Ng01-297F15.b B6Ng01-297F15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatccctaatgcagatgctatctacaacatctcctgcccttcac
tatatgttttcttttacaatatataacacaagagtgcttcttcaattgca
gcaatgcagttgatcactttgggagtatagtcctaatttgagagccttca
atatagttaattaattcagacccaacatcatcttcctgttaattcaaaaa
ttaattttaaaaaattataaacttttacagtatctccaaaatccttcact
ctttgccattcattggctagaactggttatatttcctagccacatataag
caaagagaggacacataaagctagaaactgaaatttattgggaagctcac
agagctccttgaccatataaagtacttctgttctatttgtttgaaagaat
agtgctcattattgactgatgaataaatattttgttgcctcataaattac
tgtaactgtaattcttatatgaaagactgaagcttatgtgaaagactcaa
tggcaatgtggcagattgttttttaattttatctcagttcctaaggcttc
ctagctaaagaacataattgaattaactgatgttctttgattagtagctc
ttttgtccatatagtgagtattttacataatcattttatccttcagtttt
attgtgaatgagcacatttgactccattgatagcttgtcaagaaaaagtt
aaacagtagtttaacaaggtgtacaaatttaaagtgacatgtgtatatga
atttattaatgtatgaaaaaatcagtatatcccggtgaatatttttctgc
tcatgattacatagcttttcagtatatcagaggcacagtagtttactttc
tgtattagcacattaagttcatacaataagtatttcaatgaaacaatgct
atatctaattatatacacaaagtaatctcacatagtgatactaagcaatg
attttgtagaaactgtgtccagatgaacactctctgattaccagtacctt
cattctttactattttgctaaggtaaatgtggggcataataatatttttt
cttccatttccaggagaaaatggacctgctagtctatatattaaagtaat
tcttaccacttgctggtggcc

ttcccctgtgcccatatcgtcgaggattttccccacgttctcctctataa
gttttactgtctctggttttatgtgaagttccttgatccacttagatttg
accttagtaccagctgagaccaaaggatggaccatccagagactgcccca
accagggatccatcccataatcagccaccaaacacagatactattgcata
tgccagcaagatttgctgaaagcaccctagtattgctgtctcttgtgagg
ctatgccagtgcctggcaaatatagaagtggatgctcacagtcatctata
gcatggaacacagggcccccagtgaaggagctagagaaagtacctaagga
gctgaagggatctgcaacccttcaggtggaacaaaaatatgaactaacca
gtaccccaaagcttgtgtctctagctttatctgtagcagaagatggccta
gttggccatcattgggaagagaggccctttggtattgccaactttatatg
ccccagtacagaggaatgccagggccaagaagggggagtgggtgggtagg
gga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90073347_90074843
seq2: B6Ng01-297F15.b_49_1169

seq1  GAATTCTATCCCTAATGCAGATGCTATCTACAACATCTCCTGCCCTTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCTAATGCAGATGCTATCTACAACATCTCCTGCCCTTCAC  50

seq1  TATATGTTTTCTTTTACAATATATAACACAAGAGTGCTTCTTCAATTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTCTTTTACAATATATAACACAAGAGTGCTTCTTCAATTGCA  100

seq1  GCAATGCAGTTGATCACTTTGGGAGTATAGTCCTAATTTGAGAGCCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCAGTTGATCACTTTGGGAGTATAGTCCTAATTTGAGAGCCTTCA  150

seq1  ATATAGTTAATTAATTCAGACCCAACATCATCTTCCTGTTAATTCAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTAATTAATTCAGACCCAACATCATCTTCCTGTTAATTCAAAAA  200

seq1  TTAATTTTAAAAAATTATAAACTTTTACAGTATCTCCAAAATCCTTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTAAAAAATTATAAACTTTTACAGTATCTCCAAAATCCTTCACT  250

seq1  CTTTGCCATTCATTGGCTAGAACTGGTTATATTTCCTAGCCACATATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCATTCATTGGCTAGAACTGGTTATATTTCCTAGCCACATATAAG  300

seq1  CAAAGAGAGGACACATAAAGCTAGAAACTGAAATTTATTGGGAAGCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAGGACACATAAAGCTAGAAACTGAAATTTATTGGGAAGCTCAC  350

seq1  AGAGCTCCTTGACCATATAAAGTACTTCTGTTCTATTTGTTTGAAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCTTGACCATATAAAGTACTTCTGTTCTATTTGTTTGAAAGAAT  400

seq1  AGTGCTCATTATTGACTGATGAATAAATATTTTGTTGCCTCATAAATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCATTATTGACTGATGAATAAATATTTTGTTGCCTCATAAATTAC  450

seq1  TGTAACTGTAATTCTTATATGAAAGACTGAAGCTTATGTGAAAGACTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTGTAATTCTTATATGAAAGACTGAAGCTTATGTGAAAGACTCAA  500

seq1  TGGCAATGTGGCAGATTGTTTTTTAATTTTATCTCAGTTCCTAAGGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATGTGGCAGATTGTTTTTTAATTTTATCTCAGTTCCTAAGGCTTC  550

seq1  CTAGCTAAAGAACATAATTGAATTAACTGATGTTCTTTGATTAGTAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAAAGAACATAATTGAATTAACTGATGTTCTTTGATTAGTAGCTC  600

seq1  TTTTGTCCATATAGTGAGTATTTTACATAATCATTTTATCCTTCAGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCATATAGTGAGTATTTTACATAATCATTTTATCCTTCAGTTTT  650

seq1  ATTGTGAATGAGCACATTTGACTCCATTGATAGCTTGTCAAGAAAAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAATGAGCACATTTGACTCCATTGATAGCTTGTCAAGAAAAAGTT  700

seq1  AAACAGTAGTTTAACAAGGTGTACAAATTTAAAGTGACATGTGTATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTAGTTTAACAAGGTGTACAAATTTAAAGTGACATGTGTATATGA  750

seq1  ATTTATTAATGTATGAAAAAATCAGTATATCCCGGTGAATATTTTTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAATGTATGAAAAAATCAGTATATCCCGGTGAATATTTTTCTGC  800

seq1  TCATGATTACATAGCTTTTCAGTATATCAGAGGCACAGTAGTTTACTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTACATAGCTTTTCAGTATATCAGAGGCACAGTAGTTTACTTTC  850

seq1  TGTATTAGCACATTAAGTTCATACAATAAGTATTTCAATGAAACAATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGCACATTAAGTTCATACAATAAGTATTTCAATGAAACAATGCT  900

seq1  ATATCTAATTATATACACAAAGTAATCTCACATAGTGATACTAAGCAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAATTATATACACAAAGTAATCTCACATAGTGATACTAAGCAATG  950

seq1  ATTTTGTAGAAACTGTGTCCAGATGAACACTCTCTGATTACCAGTACCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAGAAACTGTGTCCAGATGAACACTCTCTGATTACCAGTACCTT  1000

seq1  CATTCTTTACTATTTTGCTAAGGTAAATTGTGGGGCAT-ATAATATTTT-  1048
      ||||||||||||||||||||||||||| |||||||||| |||||||||| 
seq2  CATTCTTTACTATTTTGCTAAGGTAAA-TGTGGGGCATAATAATATTTTT  1049

seq1  --CTCCATTTCAGGAAGAAAAT-GACCTGCTAGTCTATATA-TAAAGTAA  1094
         ||||||||  | ||||||| |||||||||||||||||| ||||||||
seq2  TCTTCCATTTCCAGGAGAAAATGGACCTGCTAGTCTATATATTAAAGTAA  1099

seq1  TTCTTA-CACTTGCT-GTG--CACTACTTCAAGGCCGTGGTCACTTCATA  1140
      |||||| |||||||| |||  |                            
seq2  TTCTTACCACTTGCTGGTGGCC----------------------------  1121

seq1  TCCTTGTGCTAACAACTAATAGTCATCATATAGACTGAAGCTGACCTTGG  1190
                                                        
seq2  --------------------------------------------------  1121

seq1  TCAAAGCTTCAATTTATCTCTCTTTACTTCATCATCTTTCTACTTGCTGA  1240
                                                        
seq2  --------------------------------------------------  1121

seq1  TAATTAGTATCTTTTCAGACATAGACTTTAATATAATAAAATGTCACATT  1290
                                                        
seq2  --------------------------------------------------  1121

seq1  GAATAATCTGTAATTTTATCTACTGGATCAGTATTCAAATCTTTTTTAAC  1340
                                                        
seq2  --------------------------------------------------  1121

seq1  ATACTTGCTTTGCAAGCATGTTAAAAGAATTAATGAGTTAGGAGGAGAGA  1390
                                                        
seq2  --------------------------------------------------  1121

seq1  CTCTTTTTCCGAGTGAATAAACGATGTTGTGATCACTTTAGTAAGCACAT  1440
                                                        
seq2  --------------------------------------------------  1121

seq1  TAACCCCTCGAGCCTGTGTGAGTAGTACTTCAGTGAGCAAATGGTACCCT  1490
                                                        
seq2  --------------------------------------------------  1121

seq1  GGTGGCC  1497
             
seq2  -------  1121


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