BAC Information

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BAC

Clone NameB6Ng01-298E06
Chromosome4 (Build37)
Map Location 30,860,795 - 30,861,952
singlet/doubletsinglet
Overlap geneLOC100040864
Upstream geneLOC665185, LOC619906
Downstream geneLOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298E06.bB6Ng01-298E06.g
ACCGA093419GA093420
length1,1591,174
definitionB6Ng01-298E06.b B6Ng01-298E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaagatgtgacaggtgcgtgagctacatgagaagaaataagc
agaccagaaatgaaggttcactccatttcccaagaacagaaaagaaagga
agatttgagcatctttatatacttctttcctattgttatgattgagaaag
gatttcaaataaacttaaaatttctacacaaaagagagtgatgatgattt
ttgtaacgcaacatggacagagtttaagtttttctattactcatttgtta
acgtagcggagctcctaactttggaacaagattatcatttctgactttca
ttaataagcattagtatatgtgccataaataacctcaattaattttgcac
attattttagacgtgtgttatacacctattaattagcaggtggttttagt
agttaattatatataatccttacattcaaggaacttgcaacagaagttat
gggatcaccaatgaagtcaacatcagtaatgacacagtatgtcaaattca
cctgggtaagtacaatataggatgccaaagggtcatgtcttcatctctcg
agaaaatgctatggtggtggttgtgagagaaagatccttagagagagtta
aggctatactcattcctgaaaggaggcactgagagctcactcagtgggat
tctagagcagatgaatcatgtgttaaagaggctaaagtctgggcagagga
cagaatgtgcacaatttaaaggcaatgttaaaaacaatgcactctggaaa
ctgtaagcatcaatattgctggagcacagatcacaaggcaaaggaacaag
gcagaatatcacaattgcctctgcatgttaataacagtatgctatctccc
cagggtttgggggaaagtgctgagtccttttcatgatgagagatcacaat
gatcagatgtgaccatgatgtggtgaatatatctgagggagacagactcg
gttagcttcagaagagcagatcctgtgttatgcaattcagagtgcaagcc
tatgatgatgcccatgtggcatcttggatcaaatgccctctgtgttggga
aagcagaggggtgctttcataagcttgcaacagattcaccacaacgatct
ctttttcatgagaattgttcttgccacagcagtacttatatgaaaaacaa
agccttggt
gaattctcacctgaggaatacctaatggctgagaagcacctaaaaaatgt
tcaacgtccttaatcatcagggaaatgcaaatcaaaacagccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccatggttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcag
aaaattggacatagtactaccggaggatcttgcaatacctctcctgggca
tatatccagaagatatcccaattggtaagaaggacacatgctctactatg
ttcatagcagtcttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtattactcagctattaaaaggactgaatttatgaaattcctaggcaaa
tgattgacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacatgatatgaattcactgataagtggatattagcccagcaactt
agaatacccaagatagaagatacaaaacacatgaaactcaagaagactga
agaccaaagtgtggaccttttgcaccttcttagaattgggaacaaaacac
ccatggaaggagtaacagagacaaagtttggagctgagacaaaaggatgg
accatctagagactaccatatccgggatccatcccataatcagctgccaa
atgcagacaccattgcatacactagcaagattttgatgaagggaccctga
tatagctgtctcttgtgagactatgccggggcctagcaaacacagaagtg
gatactcacagtcagctactggatggatcacaggcccccagtggaggagc
tagagaaagtatccaggagctaagggatctgcaccctataggtggataca
tatgaacaagtacccccccccacccccccggagctcttgtctctagcttc
atatatattcagagatggctagttggccaatcagtgaaagaagaggccca
attgttccggcacctttatatggcttcagtacaggaaccccaaggtcaag
aagtgtgggaattagtggggtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30860795_30861952
seq2: B6Ng01-298E06.b_48_1206 (reverse)

seq1  ACCAA-GCTTTG-TTTTCATATAAGTTACTGCTGTGGCA--GACATTTCT  46
      ||||| |||||| |||||||||||| |||||||||||||   ||| ||||
seq2  ACCAAGGCTTTGTTTTTCATATAAG-TACTGCTGTGGCAAGAACAATTCT  49

seq1  CATG-AAAAGAGATCGTTTGTGGTTGAAATCTGTTGCAAGCTTATGAAAG  95
      |||| ||||||||||| |||||||   |||||||||||||||||||||||
seq2  CATGAAAAAGAGATCG-TTGTGGT--GAATCTGTTGCAAGCTTATGAAAG  96

seq1  CA-CCCTCTGCTTTCCCAACACAGAGGGCATTTGATCCAAGATGCCACAT  144
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCTGCTTTCCCAACACAGAGGGCATTTGATCCAAGATGCCACAT  146

seq1  GGGCATCATCATAGGCTTTGCACTCTGAATTGCAT-ACACAGGATCTGCT  193
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  GGGCATCATCATAGGC-TTGCACTCTGAATTGCATAACACAGGATCTGCT  195

seq1  CTTCCTGAAGCTAACCGAGTCTGTCTCCCTCAGATATATTCACCACATCA  243
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTT-CTGAAGCTAACCGAGTCTGTCTCCCTCAGATATATTCACCACATCA  244

seq1  TGGTCACATCTGATCATTGTGATCTCTCATCATGAAAAGGACTCAGCACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACATCTGATCATTGTGATCTCTCATCATGAAAAGGACTCAGCACT  294

seq1  TTCCCCCAAACCCTGGGGAGATAGCATACTGTTATTAACATGCAGAGGCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCAAACCCTGGGGAGATAGCATACTGTTATTAACATGCAGAGGCA  344

seq1  ATTGTGATATTCTGCCTTGTTCCTTTGCCTTGTGATCTGTGCTCCAGCAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATATTCTGCCTTGTTCCTTTGCCTTGTGATCTGTGCTCCAGCAA  394

seq1  TATTGATGCTTACAGTTTCCAGAGTGCATTGTTTTTAACATTGCCTTTAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGCTTACAGTTTCCAGAGTGCATTGTTTTTAACATTGCCTTTAA  444

seq1  ATTGTGCACATTCTGTCCTCTGCCCAGACTTTAGCCTCTTTAACACATGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCACATTCTGTCCTCTGCCCAGACTTTAGCCTCTTTAACACATGA  494

seq1  TTCATCTGCTCTAGAATCCCACTGAGTGAGCTCTCAGTGCCTCCTTTCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGCTCTAGAATCCCACTGAGTGAGCTCTCAGTGCCTCCTTTCAG  544

seq1  GAATGAGTATAGCCTTAACTCTCTCTAAGGATCTTTCTCTCACAACCACC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTATAGCCTTAACTCTCTCTAAGGATCTTTCTCTCACAACCACC  594

seq1  ACCATAGCATTTTCTCGAGAGATGAAGACATGACCCTTTGGCATCCTATA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGCATTTTCTCGAGAGATGAAGACATGACCCTTTGGCATCCTATA  644

seq1  TTGTACTTACCCAGGTGAATTTGACATACTGTGTCATTACTGATGTTGAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTTACCCAGGTGAATTTGACATACTGTGTCATTACTGATGTTGAC  694

seq1  TTCATTGGTGATCCCATAACTTCTGTTGCAAGTTCCTTGAATGTAAGGAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGGTGATCCCATAACTTCTGTTGCAAGTTCCTTGAATGTAAGGAT  744

seq1  TATATATAATTAACTACTAAAACCACCTGCTAATTAATAGGTGTATAACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAATTAACTACTAAAACCACCTGCTAATTAATAGGTGTATAACA  794

seq1  CACGTCTAAAATAATGTGCAAAATTAATTGAGGTTATTTATGGCACATAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCTAAAATAATGTGCAAAATTAATTGAGGTTATTTATGGCACATAT  844

seq1  ACTAATGCTTATTAATGAAAGTCAGAAATGATAATCTTGTTCCAAAGTTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGCTTATTAATGAAAGTCAGAAATGATAATCTTGTTCCAAAGTTA  894

seq1  GGAGCTCCGCTACGTTAACAAATGAGTAATAGAAAAACTTAAACTCTGTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCCGCTACGTTAACAAATGAGTAATAGAAAAACTTAAACTCTGTC  944

seq1  CATGTTGCGTTACAAAAATCATCATCACTCTCTTTTGTGTAGAAATTTTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCGTTACAAAAATCATCATCACTCTCTTTTGTGTAGAAATTTTA  994

seq1  AGTTTATTTGAAATCCTTTCTCAATCATAACAATAGGAAAGAAGTATATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTGAAATCCTTTCTCAATCATAACAATAGGAAAGAAGTATATA  1044

seq1  AAGATGCTCAAATCTTCCTTTCTTTTCTGTTCTTGGGAAATGGAGTGAAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTCAAATCTTCCTTTCTTTTCTGTTCTTGGGAAATGGAGTGAAC  1094

seq1  CTTCATTTCTGGTCTGCTTATTTCTTCTCATGTAGCTCACGCACCTGTCA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCTGGTCTGCTTATTTCTTCTCATGTAGCTCACGCACCTGTCA  1144

seq1  CATCTTGATGAATTC  1158
      |||||||||||||||
seq2  CATCTTGATGAATTC  1159