BAC Information

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BAC

Clone NameB6Ng01-298J14
Chromosome4 (Build37)
Map Location 95,756,371 - 95,757,240
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042411, 2310009E04Rik, Hook1, Cyp2j13
Downstream geneLOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298J14.bB6Ng01-298J14.g
ACCGA093664GA093665
length1,0841,172
definitionB6Ng01-298J14.b B6Ng01-298J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaagaaagttacctattcagtaactaattaagcattacaaag
gatggagctggatttggtaactaattaagcattagaaaggactgatcgga
gcagctcgggttggtctgcagagtgtttacttgggacagcagccagtctc
atcaaaacaaagaaatacacattggcctagcgaataggtggttttaccat
gaaagagttagggaattccactgagacagagatcttcagtacagccaggt
ctagcaggctacatggcatattagaaacaagctggtgatttcttctgaca
aatggagattctacacagatacttaaaagttacactcatacaagaattta
tcagggcccaggaaataggggggttatggtattgcattattcatgagaag
gtctgttagagcagaacccctggtggtgggcttaacaatagactagcttt
acacctgactcacttctttgtggcagcttcgtggtccctgccttcttttg
atgtatacattccttttgtattgtgtcactgtaactcggtggatgtatct
ctcctggtttcttgttattcttctgtataaaaagttcaatgctcgacttg
acaaattaaattcaggttctacacaatctcctgtgtgcatctgtccatca
ttttgccgactccttgcccatctgtacccagacccatccttctcagacaa
gggacccaagagggtcttcggcacttggtaaaccccaggacttcagaact
gttttgcggaacaggagattcctggggtaattctaatgtcctgggtccat
tgttttaatagccttatagcaaaagagaggaacatgtgtctcattagaat
acatttactattgttagacatgttgggtgtcatgaacaacaaaagggata
agtaactagtgaagggacagcctgtagaataggaaaaatactttgtctgc
tatttgtctagtggtagttaatgaccagattacatatatactaacaataa
acacccaacaaattgggcaaaactgacaatgtgtctcaaagaaaagctga
atgctatgaatacatgaaatgtgtttaacatgtt
gaattctatgtttagctctgttctccatttttaattggtttacttgagtt
gttggtatctaccttcttaagatctttacaaatattaaatattagtcctc
tgtcaaatgtagggttggtgaagatcctttcccaatctataggctggcat
ttacagaagtttgcagttttatgaggtcccatttatcatttgctgctctg
agagactgagcctttgggtttttgttcaggaaattgtcttctgtactaat
actttcaagattatttcccattttctcttctatgagagtaaatgtatctg
attttatgtccaggtccttgatccacttggagtttagttttgggcagggt
aatgaatgtggatctctttgcattctgctacatgtagacatccagttgga
tcagcacaaatttttggagatgctttatttcttctgttagatgactttgg
ctcatttaacaaacattaagtttccataggtgtgtgggtttatttctgag
acttcaatatgattccatgttgtcaacatggctatttctgaaccttaatg
ccatgaagttgtgatccctattgctctgtagtacagcttgtagtcaggat
ggatttttgccaaaggctttttcagcatataatgaaatgatcatgagatt
ttttttcaattagtttatttctatgatggattgagctggtggaatttttg
tatatttaactgtccctgtatccctacttctttatgatgggtgatgtttt
tgatgtgttcctgcattcagtttgtaagtattttgttgagtattttgcat
ccatgttcataagagaaagtggtctgaaattctcttttctttagtctttg
tgtggtttaagtatcaaggtgattctggcttcagaggaatgagtttggca
ggttcattctgtttccattttgtgaaatagtttgaggagtattgttatta
actcttcttaagaaagtctggtattattctgcactaaaattatatgcctg
ggctgtgttaatagaattttatgactacttctgtttcttaggggttataa
gactattcaggtagtaccggatcttcaatttaacttttctaaggggaacc
tgtcagaaaactatgcatgtctacgttccattttgggagtacttgccttg
gagaaacacctccctacaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95756371_95757240
seq2: B6Ng01-298J14.b_267_1124

seq1  CAGAGATCTTCAGTACAGCCAGGTCTAGCAGGCTACATGGCATATTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCTTCAGTACAGCCAGGTCTAGCAGGCTACATGGCATATTAGAA  50

seq1  ACAAGCTGGTGATTTCTTCTGACAAATGGAGATTCTACACAGATACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGTGATTTCTTCTGACAAATGGAGATTCTACACAGATACTTAA  100

seq1  AAGTTACACTCATACAAGAATTTATCAGGGCCCAGGAAATAGGGGGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACACTCATACAAGAATTTATCAGGGCCCAGGAAATAGGGGGGTTA  150

seq1  TGGTATTGCATTATTCATGAGAAGGTCTGTTAGAGCAGAACCCCTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTGCATTATTCATGAGAAGGTCTGTTAGAGCAGAACCCCTGGTGG  200

seq1  TGGGCTTAACAATAGACTAGCTTTACACCTGACTCACTTCTTTGTGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTAACAATAGACTAGCTTTACACCTGACTCACTTCTTTGTGGCAG  250

seq1  CTTCGTGGTCCCTGCCTTCTTTTGATGTATACATTCCTTTTGTATTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGGTCCCTGCCTTCTTTTGATGTATACATTCCTTTTGTATTGTGT  300

seq1  CACTGTAACTCGGTGGATGTATCTCTCCTGGTTTCTTGTTATTCTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAACTCGGTGGATGTATCTCTCCTGGTTTCTTGTTATTCTTCTGT  350

seq1  ATAAAAAGTTCAATGCTCGACTTGACAAATTAAATTCAGGTTCTACACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGTTCAATGCTCGACTTGACAAATTAAATTCAGGTTCTACACAA  400

seq1  TCTCCTGTGTGCATCTGTCCATCATTTTGCCGACTCCTTGCCCATCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTGTGCATCTGTCCATCATTTTGCCGACTCCTTGCCCATCTGTA  450

seq1  CCCAGACCCATCCTTCTCAGACAAGGGACCCAAGAGGGTCTTCGGCACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACCCATCCTTCTCAGACAAGGGACCCAAGAGGGTCTTCGGCACTT  500

seq1  GGTAAACCCCAGGACTTCAGAACTGTTTTGCGGAACAGGAGATTCCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACCCCAGGACTTCAGAACTGTTTTGCGGAACAGGAGATTCCTGGG  550

seq1  GTAATTCTAATGTCCTGGGTCCATTGTTTTAATAGCCTTATAGCAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTAATGTCCTGGGTCCATTGTTTTAATAGCCTTATAGCAAAAGA  600

seq1  GAGGAACATGTGTCTCATTAGAATACATTTACTATTGTTAGACATGTT-G  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGGAACATGTGTCTCATTAGAATACATTTACTATTGTTAGACATGTTGG  650

seq1  GTGTCATGAACAACAAAAGGGATAAGTAACTAGTGAAGGGACAGCCTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGAACAACAAAAGGGATAAGTAACTAGTGAAGGGACAGCCTGTA  700

seq1  GAATAGGAAAAATACTTTGTCTGCTATTTGTCTAGTGGGTAGTTAATGAC  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATAGGAAAAATACTTTGTCTGCTATTTGTCTAGT-GGTAGTTAATGAC  749

seq1  CAGATTACATAAAATACTAACAAATAAACAACCCAACAAATTGGGCAAAA  799
      |||||||||| | |||||||| ||||||| |||||||||||||||| |||
seq2  CAGATTACAT-ATATACTAAC-AATAAAC-ACCCAACAAATTGGGC-AAA  795

seq1  ACTGAACAAATGTGTCTCAAAAGAAAAAGCTGAAATGCTTAATGAATACA  849
      |||||   |||||||||||||   |||||||| ||||||  |||||||||
seq2  ACTGA--CAATGTGTCTCAAA--GAAAAGCTG-AATGCT--ATGAATACA  838

seq1  TGAAAATGTGTTTAACATGTT  870
      || ||||||||||||||||||
seq2  TG-AAATGTGTTTAACATGTT  858