BAC Information

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BAC

Clone NameB6Ng01-299G01
Chromosome4 (Build37)
Map Location 58,181,255 - 58,278,819
singlet/doubletdoublet
Overlap geneSvep1
Upstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8
Downstream geneMusk, Edg2, LOC675306, LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299G01.bB6Ng01-299G01.g
ACCGA094235GA094236
length1,129733
definitionB6Ng01-299G01.b B6Ng01-299G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,181,255 - 58,182,384)(58,278,245 - 58,278,819)
sequence
gaattcactcactgtttggcccctctgtgccaccctctttttaactcaat
aaacaaggttctggaagccccacctcaccccaggaaatatgctgcagcgc
agaactccgggacttaacctggcaagagtgacaccaagaggcagcctgtt
agtacaccgagaacaacccgttggagccttctcaaaaattgagagcacaa
tgccaataacaacacagtaccagctcatttcgcaacttaaatgttttcca
gttccccctttcaatgaagttgagaagggacccacaggaattatcagctg
atacagccattaatagcacttttttgatgacagataactgatgtcacctt
tggcatgtaagttagaagggactccaagaattcaaacccagcagcataaa
gcagcttgcaacaggcctggcagaaatgaagatattctacagagacattt
ggatctcaatcgcattatcaggctattaaattaatagatgccagagaaat
gggaatttgcctaggaatcccatgctgggaggagaagactccagccaggg
ggatacttgtctcctcacaaaggatacataattttaacaacttgttagag
caccttccagcatgaagcctggatatttggtgggtcaagagtgggcaaga
ccatgccttggttgtggctgcttgaatgtgcacatcctttgtttgaactt
tgacctcacatcagcaggaatgacttgtgggatttgctggatttctttgt
ccctcttcctatttctgcttcccacttttagttctgctccattagtccta
tggagaaattttagccaactatttgaaaatcaatcagggatacacagatt
tttttttcaatattttggcacatggtccaaaatgcttgacagcacggctt
agcggattttaaatgctttccgctgtctccttgtcgttgtaaatggaaag
caccaccacttgcagtggcactgggggagggaaggctttgggttacaatg
gaaagcagaatttactggttgcatgcagtattgtttgcattgcagcatgt
tttcttttctggacgtttagctgctggtaagtgttatgcatatttctaca
gagtaacttacattgtcctagagcctttt
gaattcttcagcacaggaaactagaacagaagatcctgatgggtgttttc
tgtaggctggagcatccgacacaaacaagtgtgccaatagcttataggga
gtaatgagaggtgttatttctgcttacttattatagatcacctatatttt
ttgttcacagagatataataaatgatttgtccaacactttctcaattccc
agggacactatgtttacaataattctcaaacctgtccaccttgctaagga
gggcagatccactaatgtattagtactaatgcacaataaacttgtcagta
gtcaatagcgccttgtggtggtttgaatgaggatgcccttaggcttcgta
tatttgcatgtttggttcccatctaggctgtttgggaagacttgggaagt
gtggccttgttggaggggttgtgggcttgaagaaggtgtgtcactagggg
tgggttttgaggtttcaaaaacctacaccaggcctagtgttgctcttttt
gcctcctgcctgcagatcaggatgtaagctctcagttactgctccagcac
ccgtgccttcctccctgccaccatgctccctgccaattaaatgcctcctt
ttatacgtagtcacagtcatgggtttctcttcacggaaacagaaacagtg
gctaaacttcatcttagcaactctgacatccattctacagctttacaaag
gcccctggtcacaggtgtataattgcccctaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_58181255_58182384
seq2: B6Ng01-299G01.b_42_1170

seq1  GAATTCACTCACTGTTTGGCCCCTCTGTGCCACCCTCTTTTTAACTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACTGTTTGGCCCCTCTGTGCCACCCTCTTTTTAACTCAAT  50

seq1  AAACAAGGTTCTGGAAGCCCCACCTCACCCCAGGAAATATGCTGCAGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGTTCTGGAAGCCCCACCTCACCCCAGGAAATATGCTGCAGCGC  100

seq1  AGAACTCCGGGACTTAACCTGGCAAGAGTGACACCAAGAGGCAGCCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCGGGACTTAACCTGGCAAGAGTGACACCAAGAGGCAGCCTGTT  150

seq1  AGTACACCGAGAACAACCCGTTGGAGCCTTCTCAAAAATTGAGAGCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACCGAGAACAACCCGTTGGAGCCTTCTCAAAAATTGAGAGCACAA  200

seq1  TGCCAATAACAACACAGTACCAGCTCATTTCGCAACTTAAATGTTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATAACAACACAGTACCAGCTCATTTCGCAACTTAAATGTTTTCCA  250

seq1  GTTCCCCCTTTCAATGAAGTTGAGAAGGGACCCACAGGAATTATCAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCCTTTCAATGAAGTTGAGAAGGGACCCACAGGAATTATCAGCTG  300

seq1  ATACAGCCATTAATAGCACTTTTTTGATGACAGATAACTGATGTCACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCCATTAATAGCACTTTTTTGATGACAGATAACTGATGTCACCTT  350

seq1  TGGCATGTAAGTTAGAAGGGACTCCAAGAATTCAAACCCAGCAGCATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTAAGTTAGAAGGGACTCCAAGAATTCAAACCCAGCAGCATAAA  400

seq1  GCAGCTTGCAACAGGCCTGGCAGAAATGAAGATATTCTACAGAGACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTGCAACAGGCCTGGCAGAAATGAAGATATTCTACAGAGACATTT  450

seq1  GGATCTCAATCGCATTATCAGGCTATTAAATTAATAGATGCCAGAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCAATCGCATTATCAGGCTATTAAATTAATAGATGCCAGAGAAAT  500

seq1  GGGAATTTGCCTAGGAATCCCATGCTGGGAGGAGAAGACTCCAGCCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTGCCTAGGAATCCCATGCTGGGAGGAGAAGACTCCAGCCAGGG  550

seq1  GGATACTTGTCTCCTCACAAAGGATACATAATTTTAACAACTTGTTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTTGTCTCCTCACAAAGGATACATAATTTTAACAACTTGTTAGAG  600

seq1  CACCTTCCAGCATGAAGCCTGGATATTTGGTGGGTCAAGAGTGGGCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCAGCATGAAGCCTGGATATTTGGTGGGTCAAGAGTGGGCAAGA  650

seq1  CCATGCCTTGGTTGTGGCTGCTTGAATGTGCACATCCTTTGTTTGAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTTGGTTGTGGCTGCTTGAATGTGCACATCCTTTGTTTGAACTT  700

seq1  TGACCTCACATCAGCAGGAATGACTTGTGGGATTTGCTGGATTTCTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCACATCAGCAGGAATGACTTGTGGGATTTGCTGGATTTCTTTGT  750

seq1  CCCTCTTCCTATTTCTGCTTCCCACTTTTAGTTCTGCTCCATTAGTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCCTATTTCTGCTTCCCACTTTTAGTTCTGCTCCATTAGTCCTA  800

seq1  TGGAGAAATTTTAGCCAACTATTTGAAAATCAATCAGGGATACACAGA-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGAGAAATTTTAGCCAACTATTTGAAAATCAATCAGGGATACACAGATT  850

seq1  TTTTTTTCAATATTTTGGCACATGGTCCAAAATGCTTGACAGCACGGCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAATATTTTGGCACATGGTCCAAAATGCTTGACAGCACGGCTT  900

seq1  AGCGGATTTTAAATGCTTTCCGCTGTCTCCTTGTCGTTGTAAATGGAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGATTTTAAATGCTTTCCGCTGTCTCCTTGTCGTTGTAAATGGAAAG  950

seq1  CACCACCACTTGCAGTGGCACT-GGGGAGGGAAGGCTTTGGTTTACAATG  998
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  CACCACCACTTGCAGTGGCACTGGGGGAGGGAAGGCTTTGGGTTACAATG  1000

seq1  GAAAGCAGAA-TTACTGGTTGCATGCAGTA-TGTTTGCATTGCAGCATG-  1045
      |||||||||| ||||||||||||||||||| |||||||||||||||||| 
seq2  GAAAGCAGAATTTACTGGTTGCATGCAGTATTGTTTGCATTGCAGCATGT  1050

seq1  TTTCTTTTCTGGAACGTTTTAGGCTGCTGGGTAAGTTGTTATGCATATTT  1095
      |||||||||||| ||||||   |||||| |||||| ||||||||||||||
seq2  TTTCTTTTCTGG-ACGTTT--AGCTGCT-GGTAAG-TGTTATGCATATTT  1095

seq1  CTACAGAGTAAACTACATTGTCACTAGAGCTTTTT  1130
      |||||||||||  ||||||||| ||||||| ||||
seq2  CTACAGAGTAACTTACATTGTC-CTAGAGCCTTTT  1129

seq1: chr4_58278245_58278819
seq2: B6Ng01-299G01.g_221_796 (reverse)

seq1  TGTAGGGGCAATTATAACACCTGTGACCTGGGGCCTTTGTAAAGCTGTAG  50
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TGTAGGGGCAATTAT-ACACCTGTGACCAGGGGCCTTTGTAAAGCTGTAG  49

seq1  AATGGATGTCAGAGTTGCTAAGATGAAGTTTAGCCACTG-TTCTGTTTCC  99
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATGGATGTCAGAGTTGCTAAGATGAAGTTTAGCCACTGTTTCTGTTTCC  99

seq1  GTGAAGAGAAACCCATGACTGTGACTACGTATAAAAGGAGGCATTTAATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGAAACCCATGACTGTGACTACGTATAAAAGGAGGCATTTAATT  149

seq1  GGCAGGGAGCATGGTGGCAGGGAGGAAGGCAC-GGTGCTGGAGCAGTAAC  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGCAGGGAGCATGGTGGCAGGGAGGAAGGCACGGGTGCTGGAGCAGTAAC  199

seq1  TGAGAGCTTACATCCTGATCTGCAGGCAGGAGGCAAAAAGAGCAACACTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTTACATCCTGATCTGCAGGCAGGAGGCAAAAAGAGCAACACTA  249

seq1  GGCCTGGTGTAGGTTTTTGAAACCTCAAAACCCACCCCTAGTGACACACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGTGTAGGTTTTTGAAACCTCAAAACCCACCCCTAGTGACACACC  299

seq1  TTCTTCAAGCCCACAACCCCTCCAACAAGGCCACACTTCCCAAGTCTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAGCCCACAACCCCTCCAACAAGGCCACACTTCCCAAGTCTTCC  349

seq1  CAAACAGCCTAGATGGGAACCAAACATGCAAATATACGAAGCCTAAGGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCCTAGATGGGAACCAAACATGCAAATATACGAAGCCTAAGGGC  399

seq1  ATCCTCATTCAAACCACCACAAGGCGCTATTGACTACTGACAAGTTTATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCATTCAAACCACCACAAGGCGCTATTGACTACTGACAAGTTTATT  449

seq1  GTGCATTAGTACTAATACATTAGTGGATCTGCCCTCCTTAGCAAGGTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTAGTACTAATACATTAGTGGATCTGCCCTCCTTAGCAAGGTGGA  499

seq1  CAGGTTTGAGAATTATTGTAAACATAGTGTCCCTGGGAATTGAGAAAGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGAGAATTATTGTAAACATAGTGTCCCTGGGAATTGAGAAAGTG  549

seq1  TTGGACAAATCATTTATTATATCTCTG  575
      |||||||||||||||||||||||||||
seq2  TTGGACAAATCATTTATTATATCTCTG  576