BAC Information

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BAC

Clone NameB6Ng01-299N10
Chromosome4 (Build37)
Map Location 55,169,309 - 55,307,460
singlet/doubletdoublet
Overlap geneLOC670211
Upstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462
Downstream geneRad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299N10.bB6Ng01-299N10.g
ACCGA094570GA094571
length483592
definitionB6Ng01-299N10.b B6Ng01-299N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,306,972 - 55,307,460)(55,169,309 - 55,169,900)
sequence
cgctttttgatcagtccaaagcgtggccttttcacagcacattccaccat
gccaacagccgtttccagagaggaactgagaattaagtggagctctggtt
gcagatgattctttttccgtgcctagctacccaaacaaagagaccgagcc
agaagccagatctgcaagggcgcgcgcacaatgggactggtgcacgggaa
tgttcagggctctgcctgattaaactgccttcagagcgccagggggcaat
ttcgctaagcctccctgtgttgtattttggcagctctctcttcccagccc
cctctgcatccccttcacatcctcaaacccatttgcgccctcatttggat
tgagaccaattcacacagactggcagagctgtaattggtatcttacttac
cttggcttctttttttctctgatcattcaaataatgacagcttttttttt
tctctccctttttcatgggtggggggggaggga

gaattcttaaaagccttgctctcatagagctcgtaagtgtcagctcacgc
cttaccaaggacacctgtctaggaattctctgtgcggcctcttgaacttc
ctcacagcatggtggcaacgccctaagcatggacacctgaagaaagccat
acggaagccatattgtcttctgtaacctactcatgaaaatggccaagctg
cgggcggtggtggcacacgcctttaatcccagcacttgggaagcagaggc
agggggatttctgagtttgagaccagcctggtctataaaagtgagttcag
gacagccagggctacacagagaaatcctgtttcgaaaaacaaaaaaaaaa
caaaaaaaaaacaaaaaaaaaccaaaaaaacaaaaaacaaacaaaaaaaa
aacaaaaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaa
aagaaaagagccaagctaacttttgctatatttgtaagcccatccatact
caagggaggatcgtggagccccacccacccacccccccacccccgagtat
aagaagtgccaggtgggaaatggaggtgggatgggaggtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55306972_55307460
seq2: B6Ng01-299N10.b_47_535 (reverse)

seq1  TCCCTCCCCCCCCACCCATGAAAAAGGGAGAGAAAAAAAAAAGCTGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCCCCCCACCCATGAAAAAGGGAGAGAAAAAAAAAAGCTGTCAT  50

seq1  TATTTGAATGATCAGAGAAAAAAAGAAGCCAAGGTAAGTAAGATACCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAATGATCAGAGAAAAAAAGAAGCCAAGGTAAGTAAGATACCAAT  100

seq1  TACAGCTCTGCCAGTCTGTGTGAATTGGTCTCAATCCAAATGAGGGCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTCTGCCAGTCTGTGTGAATTGGTCTCAATCCAAATGAGGGCGCA  150

seq1  AATGGGTTTGAGGATGTGAAGGGGATGCAGAGGGGGCTGGGAAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTTTGAGGATGTGAAGGGGATGCAGAGGGGGCTGGGAAGAGAGAG  200

seq1  CTGCCAAAATACAACACAGGGAGGCTTAGCGAAATTGCCCCCTGGCGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAAATACAACACAGGGAGGCTTAGCGAAATTGCCCCCTGGCGCTC  250

seq1  TGAAGGCAGTTTAATCAGGCAGAGCCCTGAACATTCCCGTGCACCAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAGTTTAATCAGGCAGAGCCCTGAACATTCCCGTGCACCAGTCC  300

seq1  CATTGTGCGCGCGCCCTTGCAGATCTGGCTTCTGGCTCGGTCTCTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGCGCGCGCCCTTGCAGATCTGGCTTCTGGCTCGGTCTCTTTGTT  350

seq1  TGGGTAGCTAGGCACGGAAAAAGAATCATCTGCAACCAGAGCTCCACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGCTAGGCACGGAAAAAGAATCATCTGCAACCAGAGCTCCACTTA  400

seq1  ATTCTCAGTTCCTCTCTGGAAACGGCTGTTGGCATGGTGGAATGTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGTTCCTCTCTGGAAACGGCTGTTGGCATGGTGGAATGTGCTGT  450

seq1  GAAAAGGCCACGCTTTGGACTGATCAAAAAGCGGAATTC  489
      |||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCCACGCTTTGGACTGATCAAAAAGCGGAATTC  489


seq1: chr4_55169309_55169900
seq2: B6Ng01-299N10.g_67_658

seq1  GAATTCTTAAAAGCCTTGCTCTCATAGAGCTCGTAAGTGTCAGCTCACGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAGCCTTGCTCTCATAGAGCTCGTAAGTGTCAGCTCACGC  50

seq1  CTTACCAAGGACACCTGTCTAGGAATTCTCTGTGCGGCCTCTTGAACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAAGGACACCTGTCTAGGAATTCTCTGTGCGGCCTCTTGAACTTC  100

seq1  CTCACAGCATGGTGGCAACGCCCTAAGCATGGACACCTGAAGAAAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGCATGGTGGCAACGCCCTAAGCATGGACACCTGAAGAAAGCCAT  150

seq1  ACGGAAGCCATATTGTCTTCTGTAACCTACTCATGAAAATGGCCAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGCCATATTGTCTTCTGTAACCTACTCATGAAAATGGCCAAGCTG  200

seq1  CGGGCGGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAAGCAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCGGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAAGCAGAGGC  250

seq1  AGGGGGATTTCTGAGTTTGAGACCAGCCTGGTCTATAAAAGTGAGTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGATTTCTGAGTTTGAGACCAGCCTGGTCTATAAAAGTGAGTTCAG  300

seq1  GACAGCCAGGGCTACACAGAGAAATCCTGTTTCGAAAAACAAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCAGGGCTACACAGAGAAATCCTGTTTCGAAAAACAAAAAAAAAA  350

seq1  CAAAAAAAAAACAAAAAAAAACCAAAAAAACAAAAAACAAACAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAACAAAAAAAAACCAAAAAAACAAAAAACAAACAAAAAAAA  400

seq1  AACAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA  450

seq1  AAGAAAAGAGCCAAGCTAACTTTTGCTATATTTGTAAGCCCATCCATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAGCCAAGCTAACTTTTGCTATATTTGTAAGCCCATCCATACT  500

seq1  CAAGGGAGGATCGTGGAGCCCCACCCACCCACCCCCCCACCCCCGAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGGATCGTGGAGCCCCACCCACCCACCCCCCCACCCCCGAGTAT  550

seq1  AAGAAGTGCCAGGTGGGAAATGGAGGTGGGATGGGAGGTATT  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGCCAGGTGGGAAATGGAGGTGGGATGGGAGGTATT  592


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