BAC Information

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BAC

Clone NameB6Ng01-300A21
Chromosome4 (Build37)
Map Location 4,494,311 - 4,495,488
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
Downstream geneImpad1, LOC100039338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300A21.bB6Ng01-300A21.g
ACCGA094728GA094729
length1,1711,170
definitionB6Ng01-300A21.b B6Ng01-300A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaggaactctcagagtagtagtcaaaaagattgaaaatgtgg
gatgtggattgatcctttattacatttccaggggcacaatgggatacagt
tgccctgctgagcctccatgatcaatctattctaaaacagaaaaatctca
ctattgagcaaggcaatcattttatttccagcagcgaaaaataaaggcag
tatttggagactgctccccatacagatataattttctctatgactctgtt
ttcagttatcattttggccagggctataggacagtcagatggagctcagt
tccttatccttgcattagaaatcccttaactgttaaaaatgtttactgtc
taaattaatccaagaaaagttctatgctgacaaaatggtttattactaag
tcctgtaacaaatcctctgcctccaggctgggaaacaaattggaaaagca
aacgaaatgtgtcctgtgttgctgcccaacagtctatactcatgagttgc
aaacctaaggaaacggcaaattcctgagatggttgtgctagcctttgatc
acacctgctattactctcttgtaggtcttaaaaaactcactttaggagtt
tgtctttattcttcatttttaattatgatgtgtatttgtttttaggtagt
tagggtttcattagctctaacatcctggctgcgtgtagatggcatttcct
gaacactcagaggccagtgtgtatttagggtagggcagtacattaaagtt
ctggtttgtgtgctgtcaccctatcctagaaactggtttgagagttttag
ttcacatgcaaaatgaaaggtcaaagtcaataccaaggagtctaaaatca
acgtgaagtgatacagagatgtgcacagtttgtttgttacgaacatcact
gcctcctacagaatgaacttatcatcatgtgtcacaatcatcccatgcat
tttccagctacttccagtgagctccaaatctttacacattttgaggttga
agtaaagagcaatgtgcacagtgagatagtcacagtttctttacccagtc
ttggggtgattcagaattcagtcagcaacaggaggaactttcttgcagga
gggggtccgagcagaacaggagccttagacctatgatgctagaaagaatc
aggaactgccgatgcgtctgt
gaattctgctcagaagtaacaatgttacttggccccagctgtagattatt
ctgaaatatttaaaagcaccacagtgcttcaattattctacattacacag
ctggcgcttctgttctatgaggctgatgcctggggcaaagttctgaggta
gtttgggcagccaggactggtgaggacctgctcacttctctcttgccctc
aatactgagatgtcagtgtccacaaataatcagcttgttacctcttgaga
ggaaagaaagagttctggatatgtagagaaaacaaaattgaatgggcaga
gaatataatagccccatgcatcctttctgcatgtttatctacaaaactgt
ttactgaaaagtaaactgttttaaaaatgtaaaatacacagttcttcagt
atacacataattttactttacgaaaagtaaatttgcacaccaattagata
gatgtgcttattttgttttaaataaagaactcaatattggctgaatgtaa
tgccgcaagaaacagagcatctttatcctttctctgagttgatggatatt
ttaactttatcatcataataatgagaataccatttgtataaatatttagt
acaaaatgacagaagcaaatacttatttgcactttgtatgattaacagtt
tctaaaggaccatgtctacctcacacacagaaagctgggttccaactcat
ggagtaggtcttccttcaaatcatatatttgttggttgctctcataaact
ttgtgtcacaaaaattgagctagcatgtcttgtacgtaggacatgaatgt
agtccaaagagtttatggctgggctggtgtttatatttttgtttttattt
ttgtttgtttgtttggtagaatacagagtatcttcctataccaaagatac
tagaatgtagaggggaagtttcttcatgggcaccagcttgacatctctat
aatcaatgagttgtgtaggtgttgttttcagcacaggccctactgtcagt
tgtgagagaactatagccttgacaacagtctggggttgtttggtattcca
tggtactctttgtcacatctaaatagatggttaggctatctagtacagaa
agttcattgtgacaagagaattccgagtgtggctctgttacccaatatat
tgtgggagagatttttaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4494311_4495488
seq2: B6Ng01-300A21.b_44_1214

seq1  GAATTCTTTAGGAACTCTCAGAGTAGTAGTCAAAAAGATTGAAAATGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGGAACTCTCAGAGTAGTAGTCAAAAAGATTGAAAATGTGG  50

seq1  GATGTGGATTGATCCTTTATTACATTTCCAGGGGCACAATGGGATACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGATTGATCCTTTATTACATTTCCAGGGGCACAATGGGATACAGT  100

seq1  TGCCCTGCTGAGCCTCCATGATCAATCTATTCTAAAACAGAAAAATCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCTGAGCCTCCATGATCAATCTATTCTAAAACAGAAAAATCTCA  150

seq1  CTATTGAGCAAGGCAATCATTTTATTTCCAGCAGCGAAAAATAAAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAGCAAGGCAATCATTTTATTTCCAGCAGCGAAAAATAAAGGCAG  200

seq1  TATTTGGAGACTGCTCCCCATACAGATATAATTTTCTCTATGACTCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAGACTGCTCCCCATACAGATATAATTTTCTCTATGACTCTGTT  250

seq1  TTCAGTTATCATTTTGGCCAGGGCTATAGGACAGTCAGATGGAGCTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTATCATTTTGGCCAGGGCTATAGGACAGTCAGATGGAGCTCAGT  300

seq1  TCCTTATCCTTGCATTAGAAATCCCTTAACTGTTAAAAATGTTTACTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATCCTTGCATTAGAAATCCCTTAACTGTTAAAAATGTTTACTGTC  350

seq1  TAAATTAATCCAAGAAAAGTTCTATGCTGACAAAATGGTTTATTACTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATCCAAGAAAAGTTCTATGCTGACAAAATGGTTTATTACTAAG  400

seq1  TCCTGTAACAAATCCTCTGCCTCCAGGCTGGGAAACAAATTGGAAAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAACAAATCCTCTGCCTCCAGGCTGGGAAACAAATTGGAAAAGCA  450

seq1  AACGAAATGTGTCCTGTGTTGCTGCCCAACAGTCTATACTCATGAGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAATGTGTCCTGTGTTGCTGCCCAACAGTCTATACTCATGAGTTGC  500

seq1  AAACCTAAGGAAACGGCAAATTCCTGAGATGGTTGTGCTAGCCTTTGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAAGGAAACGGCAAATTCCTGAGATGGTTGTGCTAGCCTTTGATC  550

seq1  ACACCTGCTATTACTCTCTTGTAGGTCTTAAAAAACTCACTTTAGGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGCTATTACTCTCTTGTAGGTCTTAAAAAACTCACTTTAGGAGTT  600

seq1  TGTCTTTATTCTTCATTTTTAATTATGATGTGTATTTGTTTTTAGGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTATTCTTCATTTTTAATTATGATGTGTATTTGTTTTTAGGTAGT  650

seq1  TAGGGTTTCATTAGCTCTAACATCCTGGCTGCGTGTAGATGGCATTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTTCATTAGCTCTAACATCCTGGCTGCGTGTAGATGGCATTTCCT  700

seq1  GAACACTCAGAGGCCAGTGTGTATTTAGGGTAGGGCAGTACATTAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCAGAGGCCAGTGTGTATTTAGGGTAGGGCAGTACATTAAAGTT  750

seq1  CTGGTTTGTGTGCTGTCACCCTATCCTAGAAACTGGTTTGAGAGTTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTGTGCTGTCACCCTATCCTAGAAACTGGTTTGAGAGTTTTAG  800

seq1  TTCACATGCAAAATG-AAGGTCAAAGTCAATACCAAGGAGTCTAAAATCA  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCACATGCAAAATGAAAGGTCAAAGTCAATACCAAGGAGTCTAAAATCA  850

seq1  ACGTGAAGTGATACAGAGATGTGCACAGTTTGTTTGTTACGAACATCACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAAGTGATACAGAGATGTGCACAGTTTGTTTGTTACGAACATCACT  900

seq1  GCCTCCTACAGAATGAACTTATCATCATGTGTCACAATCATCCCATGCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTACAGAATGAACTTATCATCATGTGTCACAATCATCCCATGCAT  950

seq1  TTTCCAGCTACTTCCAGTGAGCTCCAAATCTTTACACATTTTGAGGTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCTACTTCCAGTGAGCTCCAAATCTTTACACATTTTGAGGTTGA  1000

seq1  AGTAAAAGAGCAATGTGCACAGTGAGATAGTCACAGTTTCTTTACCCAGT  1049
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGT-AAAGAGCAATGTGCACAGTGAGATAGTCACAGTTTCTTTACCCAGT  1049

seq1  CTT-GGGTGATTCAG-ATTCAGTCAGGCCAACAGGGAGGACTTTCCTGCC  1097
      ||| ||||||||||| ||||||||||  |||||||  | |||||| || |
seq2  CTTGGGGTGATTCAGAATTCAGTCAG--CAACAGGAGGAACTTTCTTG-C  1096

seq1  AGGAGGGGGGCCCGAGCAAGAACAGGAG-CTTAGACCCTATGATGCTTAG  1146
      |||| ||||| |||||| |||||||||| |||||| |||||||||| |||
seq2  AGGA-GGGGGTCCGAGC-AGAACAGGAGCCTTAGA-CCTATGATGC-TAG  1142

seq1  AAAGAACCCAGGAAACTGCCTATGCTGTCTGT  1178
      ||||||  |||| ||||||| |||| ||||||
seq2  AAAGAA-TCAGG-AACTGCCGATGC-GTCTGT  1171