BAC Information

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BAC

Clone NameB6Ng01-300O03
Chromosome4 (Build37)
Map Location 14,297,890 - 14,299,040
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039988, Runx1t1, LOC625831, LOC433687, LOC100040030
Downstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300O03.bB6Ng01-300O03.g
ACCGA095341GA095342
length1,2041,133
definitionB6Ng01-300O03.b B6Ng01-300O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccaccttctggagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtatcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgcctccggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctatttctataccagtaccatgcaatttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttcgaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagttacaccaagatattttatactat
ttgtgactactgagaaggtgtgtttccctatttctttctcagcctgttaa
ttctttgtatagagaaaggcattgacttgtttggagtttattttatatca
gctactcactgaagctgctatcaagttaggagttctctggtagaaattta
ggttcacttatatatatctatctatcatctgcaaggtgaattttgacttt
cctcaattgaatctgatccttggtgcatgacccttggcctatactctcag
gact
gaattcaatcttactcacttaaaatatatgaaaggtagtcttaggcacta
tttgtttctgaagtttctaagtgacccaatacattcaaaactgacaaaaa
tttgcaaaacctcccaatttctagaagtcaaatataacttttcaagaaaa
gtagagataaaccatagattggtttttaagataaaatattgtaaaatgaa
ataaaatttctactcatggaaaaatatctttaagcattaattcaacaaca
acaacaaagacctattaaaaggttagtctgaaacaagtgctggcccaaag
tttcaggcacaaatccaagttaaaagagactctttgtcctgtatctaaga
gaacacaaaacaaccctactctctacccatgaatcaataaaagtgttaaa
ggctcaaggccagctaaagaattcacaagactttttcatttgctcccatc
ctggtctttcataggctttatttaattgtgatcttctgccaggacaccaa
aacgtctatctctaagatttgccatactagtcttagattcttgtaatacc
tttggttgtcttgactctctcttagttttcttccttctgttctcttgaca
aaattgtgattttgtagaataatgtctttgatgctgttagtccattagta
aaaccagagaatggcagttcttacatagtatctcctaatattcaaaaatt
gcaaaatgttggcatatctgagcactaaaaccagcattttaaacacagta
acaattcaggaggttagttaactgagtcctaactgctaaacatatgctga
aaaagtatgtgtgtggaatatagaaatggaattccttgtcgagttttagt
gaactaggagatcagaatgtggacatgacagttgatagacatcctgattt
tccattgtcagatgaatcttaaaacaggtctaaaaatgcatgaaagtaga
tgtgtaaagtgaaaaaaagaatgtacataaatttagagagctattctgtt
gcccttttatctccacaataaatagcatggagactttgtatttttattaa
agcttcagcactaatctggcaggttcttactatttctactggatatgcag
ctactactcagcacatgctctatccttgcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14297890_14299040
seq2: B6Ng01-300O03.g_66_1198

seq1  GAATTCAATCTTACTCACTTAAAATATATGAAAGGTAGTCTTAGGCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTACTCACTTAAAATATATGAAAGGTAGTCTTAGGCACTA  50

seq1  TTTGTTTCTGAAGTTTCTAAGTGACCCAATACATTCAAAACTGACAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTGAAGTTTCTAAGTGACCCAATACATTCAAAACTGACAAAAA  100

seq1  TTTGCAAAACCTCCCAATTTCTAGAAGTCAAATATAACTTTTCAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAACCTCCCAATTTCTAGAAGTCAAATATAACTTTTCAAGAAAA  150

seq1  GTAGAGATAAACCATAGATTGGTTTTTAAGATAAAATATTGTAAAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATAAACCATAGATTGGTTTTTAAGATAAAATATTGTAAAATGAA  200

seq1  ATAAAATTTCTACTCATGGAAAAATATCTTTAAGCATTAATTCAACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTCTACTCATGGAAAAATATCTTTAAGCATTAATTCAACAACA  250

seq1  ACAACAAAGACCTATTAAAAGGTTAGTCTGAAACAAGTGCTGGCCCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAGACCTATTAAAAGGTTAGTCTGAAACAAGTGCTGGCCCAAAG  300

seq1  TTTCAGGCACAAATCCAAGTTAAAAGAGACTCTTTGTCCTGTATCTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCACAAATCCAAGTTAAAAGAGACTCTTTGTCCTGTATCTAAGA  350

seq1  GAACACAAAACAACCCTACTCTCTACCCATGAATCAATAAAAGTGTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAAACAACCCTACTCTCTACCCATGAATCAATAAAAGTGTTAAA  400

seq1  GGCTCAAGGCCAGCTAAAGAATTCACAAGACTTTTTCATTTGCTCCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAAGGCCAGCTAAAGAATTCACAAGACTTTTTCATTTGCTCCCATC  450

seq1  CTGGTCTTTCATAGGCTTTATTTAATTGTGATCTTCTGCCAGGACACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTTCATAGGCTTTATTTAATTGTGATCTTCTGCCAGGACACCAA  500

seq1  AACGTCTATCTCTAAGATTTGCCATACTAGTCTTAGATTCTTGTAATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCTATCTCTAAGATTTGCCATACTAGTCTTAGATTCTTGTAATACC  550

seq1  TTTGGTTGTCTTGACTCTCTCTTAGTTTTCTTCCTTCTGTTCTCTTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGTCTTGACTCTCTCTTAGTTTTCTTCCTTCTGTTCTCTTGACA  600

seq1  AAATTGTGATTTTGTAGAATAATGTCTTTGATGCTGTTAGTCCATTAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGATTTTGTAGAATAATGTCTTTGATGCTGTTAGTCCATTAGTA  650

seq1  AAACCAGAGAATGGCAGTTCTTACATAGTATCTCCTAATATTCAAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAGAATGGCAGTTCTTACATAGTATCTCCTAATATTCAAAAATT  700

seq1  GCAAAATGTTGGCATATCTGAGCACTAAAACCAGCATTTTAAACACAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGTTGGCATATCTGAGCACTAAAACCAGCATTTTAAACACAGTA  750

seq1  ACAATTCAGGAGGTTAGTTAACTGAGTCCTAACTGCTAAACATATGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCAGGAGGTTAGTTAACTGAGTCCTAACTGCTAAACATATGCTGA  800

seq1  AAAAGTATGTGTGTGGAATATAGAAATGGAATTCCTTGTCGAGTTTTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATGTGTGTGGAATATAGAAATGGAATTCCTTGTCGAGTTTTAGT  850

seq1  GAACTAGGAGATCAGAATGTGGACATGACAGTTGATAGACATCCTGATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGGAGATCAGAATGTGGACATGACAGTTGATAGACATCCTGATTT  900

seq1  TCCATTGTCAGATGAATCTTAAAACAGGTCTAAAAAATGCATGAAAGTAG  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCATTGTCAGATGAATCTTAAAACAGGTCT-AAAAATGCATGAAAGTAG  949

seq1  ATGTGTAAAGTGAAAAAAAGAATGTAACATAAATTTAGAGAGCTATTCTG  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGTGTAAAGTGAAAAAAAGAATGT-ACATAAATTTAGAGAGCTATTCTG  998

seq1  TTGCCCCTTTAATCTCCACAATAAATAGCATGGAGACCTTGTATTTTTAT  1050
      ||| |||||| |||||||||||||||||||||||||| ||||||||||||
seq2  TTG-CCCTTTTATCTCCACAATAAATAGCATGGAGACTTTGTATTTTTAT  1047

seq1  TAAAAGCTTCAGGCACTAATCTGGGCAGGTTCTTAACTA-TTCTAACCTG  1099
      | ||||||||| |||||||||| ||||||||||| |||| |||||  |||
seq2  T-AAAGCTTCA-GCACTAATCT-GGCAGGTTCTT-ACTATTTCTA--CTG  1091

seq1  AATATGCAGGCCTAACCTACTTCCCAGCCACATGCTCTATCGCTTGCCAT  1149
       ||||||||       ||||| | ||| ||||||||||||| |||| |||
seq2  GATATGCAG-------CTACTACTCAG-CACATGCTCTATC-CTTG-CAT  1131

seq1  CT  1151
      ||
seq2  CT  1133