BAC Information

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BAC

Clone NameB6Ng01-301F13
Chromosome4 (Build37)
Map Location 64,534,474 - 64,535,612
singlet/doubletsinglet
Overlap genenone
Upstream geneRpl17-ps, Tnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301F13.bB6Ng01-301F13.g
ACCGA095680GA095681
length1,1271,163
definitionB6Ng01-301F13.b B6Ng01-301F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacatcttctgagggtctcttccttatagatgacatctgtgtta
tcacaaggcagaaaagacaaaacttctttgacattgataataagagcacc
ggtctcatttatgagcagggaactaccctggtttagtcaattgctaaaga
ccacttcttaagaatcgtttataatgtcattctgggcattaaagttgcaa
aatatgaactcacagagaggggagacattggtattcaggttatagcactt
ccaatgtcccaggtatcattcagatgtctaaataaacaaaataaaattgt
gtattcagtaagcttcaatgaaagaatggagagtgggggaaatatgaaaa
gacagagagcttacaggcaatgagtcatgttctatttagatgaaagatgg
tgaaactagcaagttggttcacccaaatggcagaaagaatttttattttt
cattttttattgaaaatatttttatacactatatagtgattatggtttcc
ctaacatagcttctcccagatccttatgtctttactacccaaccaaattt
acattctttctctctaattgcaatagaaataagcatctaactcataataa
tgttgttgttgaagatgatataaataaaaataaaaggctaaagaaaaaaa
aaaactcttcatatgggtgttttgtctgagtgtgtatctctgtaccatgt
gtatggctgctgttcacagagatcagaagtcagatactctgatactctgg
agttacagatggttattagtccagtgattcatatgcaacaagtgctctta
accactgaagtctcttcagctcagatgaaataattcttgttacagaacac
ctaatgcatggcatgggacagatttatgttaacagctaatacaggagcag
agttccaggtagagtttaatagtcaatacatatgtcattcctagataaat
ccaaatatgagcacacctctcttcagaagtcttttcccacatcatgcatt
ttgtgggggagatgagagatgtaacacactgaatagaaagaagtcagttg
tagagcggacctgtgaaactcagtattcttcctctactgcagctcctatt
atatgctgatcttcagctctctatgaa
gaattctcacctgaggaatactgaatggctgagaaacacctgaaaaaatg
ttcagcatcattaatcatcagggaaatgcaaatcaaaacaaccctgtggt
tccacctcacaccagtcagaatggtaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagtttgtacaaccgctctagaaatcagtctggttgattctcag
aaaattggacatagtactactgaaggatcctgcaatatctctcctgggta
tatatccagaagatgttccaactggtaagaaggacacatgctccactatg
tcacagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcagcagaggaatggatagagaaaatgtggtacatttacaccatgga
gtactcctcagctattaaaaagaatgaatttatgaatttcctagggaaat
ggatggacctggagggcatcatcctgaatgaggtaacccaatcacaaaag
tactcatatgatatgtactcactgataagtggatatcatcccagatactt
agaatacccaagatataaggtacaattggtgaaattcatgaaactcaaga
gaaacaaagaccaaagtgtagacactttgccccttcttagaattaggaac
aaaacacccatgataggagttacagagacaaagtttggagctgagacaaa
aggttggaccatctagagactgccatatctggggatctatcccataatca
gcctccatatgttgacaccattgcatacactagcaagattttgctgaaag
gacctttgatatagctgtctcttctgagactatgtcggggcccagcaaac
acagaagtggatgctcacagttagctattggatggatcacagggcctcca
atggaggagctagagaaagtacccagaactagagtattctgcacctatag
tgcacacatatgaactaccagtacctttgacttgtgtctctagctgcata
tgttatcagaagatgctagtggccatcagttgaagagaagtccattggtc
atctaactttaatgccatagtatacggaatcgcccaaggggctcaagaaa
gtgtgcgtgatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64534474_64535612
seq2: B6Ng01-301F13.b_43_1169

seq1  GAATTCCACATCTTCTGAGGGTCTCTTCCTTATAGATGACATCTGTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCTTCTGAGGGTCTCTTCCTTATAGATGACATCTGTGTTA  50

seq1  TCACAAGGCAGAAAAGACAAAACTTCTTTGACATTGATAATAAGAGCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGCAGAAAAGACAAAACTTCTTTGACATTGATAATAAGAGCACC  100

seq1  GGTCTCATTTATGAGCAGGGAACTACCCTGGTTTAGTCAATTGCTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATTTATGAGCAGGGAACTACCCTGGTTTAGTCAATTGCTAAAGA  150

seq1  CCACTTCTTAAGAATCGTTTATAATGTCATTCTGGGCATTAAAGTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTTAAGAATCGTTTATAATGTCATTCTGGGCATTAAAGTTGCAA  200

seq1  AATATGAACTCACAGAGAGGGGAGACATTGGTATTCAGGTTATAGCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAACTCACAGAGAGGGGAGACATTGGTATTCAGGTTATAGCACTT  250

seq1  CCAATGTCCCAGGTATCATTCAGATGTCTAAATAAACAAAATAAAATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTCCCAGGTATCATTCAGATGTCTAAATAAACAAAATAAAATTGT  300

seq1  GTATTCAGTAAGCTTCAATGAAAGAATGGAGAGTGGGGGAAATATGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCAGTAAGCTTCAATGAAAGAATGGAGAGTGGGGGAAATATGAAAA  350

seq1  GACAGAGAGCTTACAGGCAATGAGTCATGTTCTATTTAGATGAAAGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGAGCTTACAGGCAATGAGTCATGTTCTATTTAGATGAAAGATGG  400

seq1  TGAAACTAGCAAGTTGGTTCACCCAAATGGCAGAAAGAATTTTTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAGCAAGTTGGTTCACCCAAATGGCAGAAAGAATTTTTATTTTT  450

seq1  CATTTTTTATTGAAAATATTTTTATACACTATATAGTGATTATGGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTATTGAAAATATTTTTATACACTATATAGTGATTATGGTTTCC  500

seq1  CTAACATAGCTTCTCCCAGATCCTTATGTCTTTACTACCCAACCAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAGCTTCTCCCAGATCCTTATGTCTTTACTACCCAACCAAATTT  550

seq1  ACATTCTTTCTCTCTAATTGCAATAGAAATAAGCATCTAACTCATAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTCTCTCTAATTGCAATAGAAATAAGCATCTAACTCATAATAA  600

seq1  TGTTGTTGTTGAAGATGATATAAATAAAAATAAAAGGCTAAAGAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGAAGATGATATAAATAAAAATAAAAGGCTAAAGAAAAAAA  650

seq1  AAAACTCTTCATATGGGTGTTTTGTCTGAGTGTGTATCTCTGTACCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTCATATGGGTGTTTTGTCTGAGTGTGTATCTCTGTACCATGT  700

seq1  GTATGGCTGCTGTTCACAGAGATCAGAAGTCAGATACTCTGATACTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGCTGCTGTTCACAGAGATCAGAAGTCAGATACTCTGATACTCTGG  750

seq1  AGTTACAGATGGTTATTAGTCCAGTGATTCATATGCAACAAGTGCTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGATGGTTATTAGTCCAGTGATTCATATGCAACAAGTGCTCTTA  800

seq1  ACCACTGAAGTCTCTTCAGCTCAGATGAAATAATTCTTGTTACAGAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGAAGTCTCTTCAGCTCAGATGAAATAATTCTTGTTACAGAACAC  850

seq1  CTAATGCATGGCATGGGACAGATTTATGTTAACAGCTAATACAGGAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCATGGCATGGGACAGATTTATGTTAACAGCTAATACAGGAGCAG  900

seq1  AGTTCCAGGTAGAGTTTAATAGTCAATACATATGTCATTCCTAGATAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGTAGAGTTTAATAGTCAATACATATGTCATTCCTAGATAAAT  950

seq1  CCAAATATGAGCACACCTCTCTTCAGAAGTCTTTTCCCCAACATCATGCA  1000
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  CCAAATATGAGCACACCTCTCTTCAGAAGTCTTTTCCC--ACATCATGCA  998

seq1  TTTTGTGGGGAGAATGAAGAGATGTAACACACTGAATAAGAAAGAAGTCA  1050
      ||||||||||   ||| |||||||||||||||||||| ||||||||||||
seq2  TTTTGTGGGGGAGATG-AGAGATGTAACACACTGAAT-AGAAAGAAGTCA  1046

seq1  GTGGTAGAGCCGACACTGTGAAACTCCAGTATTCTCCCTTCTACTGCCAG  1100
      || ||||||| ||| |||||||||| ||||||||| || ||||||| |||
seq2  GTTGTAGAGCGGAC-CTGTGAAACT-CAGTATTCTTCC-TCTACTG-CAG  1092

seq1  CCTCCCTATTATATGCTGATCCTCAGCTCCTCTTATGAA  1139
      |   ||||||||||||||||| |||||| ||| ||||||
seq2  C--TCCTATTATATGCTGATCTTCAGCT-CTC-TATGAA  1127