BAC Information

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BAC

Clone NameB6Ng01-301L10
Chromosome4 (Build37)
Map Location 61,782,952 - 61,783,477
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3
Downstream geneLOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301L10.bB6Ng01-301L10.g
ACCGA095954GA095955
length1,184858
definitionB6Ng01-301L10.b B6Ng01-301L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatggctgagaagcacctagagaaaag
ttcaacatccttagtcatcaggtaaatgcaaatcaaaacaaccctgagat
tctcacaccacacagaacagcaaagatcaaaattcaggtgacagcagatg
ctggtgaggatgtagagagagaggaacactcctccattgctagtgggatt
tcaaactggtacaaccactctgaaactcactctggaagtttctcagaaaa
ctggaaatagtattatgtaaggacccagctacaccactcctgggcatata
cccaaaagatgctccaacatataactaggacacatattccactattttca
taacagccttaattataatagccagaagctggaaagaacccagatgtccc
tcaatggaggaatggacagagaaaaagtggtacattaacacagtggagta
ctactcagctattaaaaacaatgaatttatgaaattcttaggaaaatgat
tagaactagaaaatatcatcctaagtgagataattcaatcacaaaagaac
acacatagtatgcactcactgataagtggatattagcccagaagctcaaa
ataaccaagatacaattcacagaccacatgaagctcaagaagaagtaata
taaaagttcttagaagggggaacaaaatacccataggaggagttacagag
acaaagtgtagaacagagattgaaggaaaagccattcagagactgcccct
cctggcatccatcccaaatacagtcaccaaaaccagacactactgtggat
gccaacaagtgtttgctgacagaggctctaacagtgcctgacaaatacag
aagtacatgctctcaggtgaccattggactgagcacagggtttcctaatc
aaggagttagagaaaggactgaaggagctaaaggggtttccaacctcaca
ggaggaacaacatatgaatcaacctgtattccccggggctcccaggacta
aacaacaacaaagagtacacatggaactcagccccattttgtagcagagg
atgtcttgtcagtcaccatggggaggagaggcctggtctggagctctgtg
cccagtggaggatgcagaacagaactgatgtggctgttgaccgaagaaac
tgcaggggatatggggggctttttcacaggtgta
gaattcttttctttatttcttccttgactcaaggatcattgagtagagaa
ttgttcagtttccacgagtttgtgggctttctgttgtttctgtggttgaa
gtctagatttaatgcatgataggctgataggatactaggagttatttcaa
tgttcttgtatctgttgagatacaagaccaactgctttgtgatcaactat
gtggtcagttttgggaaagattcaatgagatgctaagaagaaggttttgt
gtgtgtgtgtgtttgggtgagatgttctctagatatgtgttaggtccatt
tgattcatagcttctgctagtttcattaattctctgcttactttctatct
caatgacctatccattgttgagagtgggaacctctacctgtttgattgta
tcttcctgtatttctttaagggatttattcatttttttctttaaaggcct
ctatcatcttcataagattgagtgaatgtcattttcttgtgctttacttg
tgtaaggatatccagggtttctgtagtaagatagctatgctctgaagatg
gcatatttcatttggtcttgttggttatgttcttatgctggcctttagtc
atctggttgtccctggattttataggtgtaacaggtatcaggagatttgg
cctaacctggatattcctggtgcagcaggcctctggtgggcagccttggg
ctggacaatggatctcatgtggcaggctcagagcagctggttgtgcccca
ggtgacatagagagcagagatttggggcaggagatagggtctatcctgta
tactccaagtacatcagtctgtgtgaggccagtggagcagtggctggaca
atggagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61782952_61783477
seq2: B6Ng01-301L10.g_396_924 (reverse)

seq1  AGCTCCATTGTCCAGTCCCTGCTCCACTGGCCTCCACCAGACCTGCTGTA  50
      ||||||||||||||| | ||||||||||||||||   |||| ||| ||||
seq2  AGCTCCATTGTCCAGCCACTGCTCCACTGGCCTCACACAGA-CTGATGTA  49

seq1  CCTGGAATATACCTGGAATAGACCCTACCTCCTGCCCCCAATCTCCTGC-  99
      | |||| |||||   | |||||||||| |||||||||| ||||| |||| 
seq2  CTTGGAGTATAC--AGGATAGACCCTATCTCCTGCCCCAAATCT-CTGCT  96

seq1  CTATATATCACCTGGGGCACAACCAGCTGCTCTGAGACTGCC--------  141
      || ||| ||||||||||||||||||||||||||||| |||||        
seq2  CTCTATGTCACCTGGGGCACAACCAGCTGCTCTGAGCCTGCCACATGAGA  146

seq1  -CCATTGACCAGCCCAAGGCTGCCCACCAGAGGCCTGCTGCACTAGAAGT  190
       |||||| ||||||||||||||||||||||||||||||||||| || | |
seq2  TCCATTGTCCAGCCCAAGGCTGCCCACCAGAGGCCTGCTGCACCAGGAAT  196

seq1  ATCCAGGTTAGGCCCAATTTCCTGATACCTGTAACACCTATAAAATCCAG  240
      |||||||||||||| ||| ||||||||||||| |||||||||||||||||
seq2  ATCCAGGTTAGGCCAAATCTCCTGATACCTGTTACACCTATAAAATCCAG  246

seq1  GGACAACCAGATGACTAAAGTCCAGCATAAGAACATAACCAACAAGAACC  290
      |||||||||||||||||||| |||||||||||||||||||||||||| | 
seq2  GGACAACCAGATGACTAAAGGCCAGCATAAGAACATAACCAACAAGACCA  296

seq1  ACTGAAATATGCCATCTTCAAAGCATAGCTATTCTACTACAGCAACCCTG  340
      | |||||||||||||||||| |||||||||||  |||||||| |||||||
seq2  AATGAAATATGCCATCTTCAGAGCATAGCTATCTTACTACAGAAACCCTG  346

seq1  GATATCCTAACACAACTAAAGCACAAGAAAATGGCATTCATTCAATCTTA  390
      |||||||| |||||| ||||||||||||||||| |||||| |||||||||
seq2  GATATCCTTACACAAGTAAAGCACAAGAAAATGACATTCACTCAATCTTA  396

seq1  TAAAGATGATAGAGGCCTTT-----AAAAAATTAATAAATCCCTTAAAGA  435
      | ||||||||||||||||||     ||||||| |||||||||||||||||
seq2  TGAAGATGATAGAGGCCTTTAAAGAAAAAAATGAATAAATCCCTTAAAGA  446

seq1  AATACAGGAAAATACAATCAAACATGTAGAGGTCTTCATCACCCCACTCT  485
      |||||||||| ||||||||||||| ||||||||         ||||||||
seq2  AATACAGGAAGATACAATCAAACAGGTAGAGGT--------TCCCACTCT  488

seq1  CACCAATGGACAGGTCATTGAGATAGAAAGTAAGCAGAGAA  526
      || ||||||| ||||||||||||||||||||||||||||||
seq2  CAACAATGGATAGGTCATTGAGATAGAAAGTAAGCAGAGAA  529