BAC Information

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BAC

Clone NameB6Ng01-301M11
Chromosome4 (Build37)
Map Location 92,218,232 - 92,368,456
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301M11.bB6Ng01-301M11.g
ACCGA096003GA096004
length959470
definitionB6Ng01-301M11.b B6Ng01-301M11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,218,232 - 92,219,141)(92,367,984 - 92,368,456)
sequence
gaattcagcatgggtccctatttaaaaatcaaggcatggtggctcatgac
tgtaacaatgctggggaaattgagctagaaagaattccagaacttgatac
acaacttattcagttaaagtagtaaattcctaggacagagattcatcatg
tctcaacaaacaagatgaagatttactaatgacatgaggaaggtcacatg
tgttcatttctggcctctatacatttaagtgaacacaggcaaacatattc
acaaacacatgaatttattacaatatgctatatttccatttgtatcacac
atacacacacctacatattaaaacatataaaatcacatcttccaaaaata
ttgctgcttaatggtggtgaactggttgcaggcatgtttcacaaagatca
gttgcaatttactatttttttttcattttttattaggtatttagctcatt
tacatttccaatgctataccaaaagtcccccatacccacccaccaccact
cccctacccacccactccccctttttggccctggcgttcccctgttctgg
ggcatataaagtttgcgtgtccaatgggcctctctttccagtgatgaccg
actaggccatcttttgatacatatgcagctagagccaagagctccggggt
actggttagttcataatgttgatccacctatagtgttgcagatcccttta
gctccttgggtactttctctagctcctccattgggagccctgtgatccat
ccattacctgactgtgagcatccacttctgtgtttgctaggccccggcat
agtctcacaagagacagctacatctgggtcctttcgataaaatcttgcta
gtgtatgcaatggtgtcagcctttggatgctgattatggggtggatccct
ggatatggcagtctctacatggtccatcctttcatctcagctccaaactt
tgtctctgt

taaattcccaatcaaaatatcaagtccttatttgaaatatatgtgacttt
gacgttactagtgagttaaatgcaacgaaatgttacattaaaataaaagt
agtaccatgggttcccatttccttcacatttagaaaagatactctatgag
gcaattcagaaaagaaaaacagaggtactgttatctcccatatgtggagc
atgaccctaaatatttacaaccgtgtatttaagtggtagtacttgccaga
gaactggaaagcaaccattaggggatacctcaaaggaaagatgtcagtag
atgataggttgtttgaaagtatagagaaggaatgaacaccagcagtagaa
tggtttaaggaatgtaagggtggggaattggggtgatgggcaggaatcaa
aaattcaggtaagtgtttgttttttgagcaaattacaaaatatttgttaa
aaaattttataaggtatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92218232_92219141
seq2: B6Ng01-301M11.b_50_959

seq1  GAATTCAGCATGGGTCCCTATTTAAAAATCAAGGCATGGTGGCTCATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATGGGTCCCTATTTAAAAATCAAGGCATGGTGGCTCATGAC  50

seq1  TGTAACAATGCTGGGGAAATTGAGCTAGAAAGAATTCCAGAACTTGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAATGCTGGGGAAATTGAGCTAGAAAGAATTCCAGAACTTGATAC  100

seq1  ACAACTTATTCAGTTAAAGTAGTAAATTCCTAGGACAGAGATTCATCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTATTCAGTTAAAGTAGTAAATTCCTAGGACAGAGATTCATCATG  150

seq1  TCTCAACAAACAAGATGAAGATTTACTAATGACATGAGGAAGGTCACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAAACAAGATGAAGATTTACTAATGACATGAGGAAGGTCACATG  200

seq1  TGTTCATTTCTGGCCTCTATACATTTAAGTGAACACAGGCAAACATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTCTGGCCTCTATACATTTAAGTGAACACAGGCAAACATATTC  250

seq1  ACAAACACATGAATTTATTACAATATGCTATATTTCCATTTGTATCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACATGAATTTATTACAATATGCTATATTTCCATTTGTATCACAC  300

seq1  ATACACACACCTACATATTAAAACATATAAAATCACATCTTCCAAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACCTACATATTAAAACATATAAAATCACATCTTCCAAAAATA  350

seq1  TTGCTGCTTAATGGTGGTGAACTGGTTGCAGGCATGTTTCACAAAGATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTTAATGGTGGTGAACTGGTTGCAGGCATGTTTCACAAAGATCA  400

seq1  GTTGCAATTTACTATTTTTTTTTCATTTTTTATTAGGTATTTAGCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATTTACTATTTTTTTTTCATTTTTTATTAGGTATTTAGCTCATT  450

seq1  TACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCACCACT  500

seq1  CCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTTCTGG  550

seq1  GGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGACCG  600

seq1  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGCCAAGAGCTCCGGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGCCAAGAGCTCCGGGGT  650

seq1  ACTGGTTAGTTCATAATGTTGATCCACCTATAGTGTTGCAGATCCCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTTCATAATGTTGATCCACCTATAGTGTTGCAGATCCCTTTA  700

seq1  GCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCAT  750

seq1  CCATTACCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAT  800

seq1  AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTA  850

seq1  GTGTATGCAATGGTGTCAGCCTTTGGATGCTGATTATGGGGTGGATCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGCAATGGTGTCAGCCTTTGGATGCTGATTATGGGGTGGATCCCT  900

seq1  GGATATGGCA  910
      ||||||||||
seq2  GGATATGGCA  910


seq1: chr4_92367984_92368456
seq2: B6Ng01-301M11.g_67_541 (reverse)

seq1  AGATGCCTTAT-AAATTTTTTAACTAATATTTTGTAATTTGCTC-AAAAA  48
      |||| |||||| |||||||||||| ||||||||||||||||||| |||||
seq2  AGATACCTTATAAAATTTTTTAACAAATATTTTGTAATTTGCTCAAAAAA  50

seq1  CAAACACTTACCTCTATTTTTGATTCCTGCCCATCACCCCAATTCCCCAC  98
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  CAAACACTTACCTGAATTTTTGATTCCTGCCCATCACCCCAATTCCCCAC  100

seq1  CCTTACATTCCTTAAACCATTCTACTGCTGGTGTTCATTCCTTCTCTATA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATTCCTTAAACCATTCTACTGCTGGTGTTCATTCCTTCTCTATA  150

seq1  CTTTCAAACAACCTATCATCTACTGACATCTTTCCTTTGAGGTATCCCCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAACAACCTATCATCTACTGACATCTTTCCTTTGAGGTATCCCCT  200

seq1  AATGGTTGCTTTCCAGTTCTCTGGCAAGTACTACCACTTAAATACACGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTGCTTTCCAGTTCTCTGGCAAGTACTACCACTTAAATACACGGT  250

seq1  TGTAAATATTTAGGGTCATGCTCCACATATGGGAGATAACAGTACCTCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATTTAGGGTCATGCTCCACATATGGGAGATAACAGTACCTCTG  300

seq1  TTTTTCTTTTCTGAATTGCCTCATAGAGTATCTTTTCTAAATGTGAAGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTCTGAATTGCCTCATAGAGTATCTTTTCTAAATGTGAAGGA  350

seq1  AATGGGAACCCATGGTACTACTTTTATTTTAATGTAACATTTCGTTGCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAACCCATGGTACTACTTTTATTTTAATGTAACATTTCGTTGCAT  400

seq1  TTAACTCACTAGTAACGTCAAAGTCACATATATTTCAAATAAGGACTTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCACTAGTAACGTCAAAGTCACATATATTTCAAATAAGGACTTGA  450

seq1  TATTTTGATTGGGAATTTAGAATTC  473
      |||||||||||||||||||||||||
seq2  TATTTTGATTGGGAATTTAGAATTC  475


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