BAC Information

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BAC

Clone NameB6Ng01-301O07
Chromosome4 (Build37)
Map Location 91,494,831 - 91,495,889
singlet/doubletsinglet
Overlap geneLOC620016
Upstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
Downstream geneLOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301O07.bB6Ng01-301O07.g
ACCGA096087GA096088
length1,0611,160
definitionB6Ng01-301O07.b B6Ng01-301O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaggattagagttcattttcagccacaattatgaattagatat
gccttaaggaagaagtaactaattcctctgctatagaaaccaaaattgcc
aactaatgcttcccatcatcttctagtaagtcagagatcactaccaaact
tttgttatttttttaagttatctgagaatcatattagatgttggatgatt
atacctgagacagcattgtgaagggaacatatattccatgttttcattaa
cctcttcttcccccatcgctctttagtaaggttttcataggtaatcaatc
cattttagaatagaatgcatttgctttgctataccattctaccactaaag
accacgaataataaagtatacgaactatattttgttcacagtagaaatgt
actaactttgaagtgaaataaagtactcatcatttagaatatgccattaa
aatgtaaaatatgagcacacagtcaagcctcagtaaataaacactttatc
ttcatgggactctagtcacataatccattccctgaacacgcatgttcagg
gcaaacatttataaatttttcattcactcaccttgtgccactgatacgtc
cttctaagtctgtgacctccaaaaacaaagtaagtccccaacatcataaa
agacaaggctatatggatgttttgtgattgttcttcactggaaaagaggg
gaaaatgacctaatattattagaataaataaagtagcttacaatggtcca
gagatgtctagtatagtccccaacaccaaatctgacatcaaatgctcaaa
taacacgaagaatggaagtaaaaagagatgctctgataatcatatctgtt
actaaaatagatactgtgacaaataacaatagaaagaacaaaccctgtaa
tggaaataagatggaataaaggaaactaatgactgagataaagacaaatg
tcatgacagtggcaggtagggtgacaaatgaaatgcttggatagcaaatc
taggaaagtagagagctgagaagaacccaagacttaggactaagacaaat
cttattcagca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcccaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaaggagctagaggaaagtaccaagagctaaaagggatctcaaccta
ataggtggaacaacataatgaactaaccagtacccctgagctcttgactc
tagctgcatatgtatcaaagatggctagtccgcaatcactgaaagagagg
ccatgacacgcgactgtgtgcctggtacggtacgccaggcaaagaggggc
aaattgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91494831_91495889
seq2: B6Ng01-301O07.b_49_1109 (reverse)

seq1  TGCTGA--TAGATTTGTCTTAGT-CTTAGTCTTGGGT--CTCTCAGCTCT  45
      ||||||   |||||||||||||| || ||||||||||   ||||||||||
seq2  TGCTGAATAAGATTTGTCTTAGTCCTAAGTCTTGGGTTCTTCTCAGCTCT  50

seq1  CTACTTTCCTAGATTTTGCTTATCCAAGCATTTCATTTGTCACCCTACCT  95
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  CTACTTTCCTAGA-TTTGC-TATCCAAGCATTTCATTTGTCACCCTACCT  98

seq1  GCCACTGTCATGACATTTGTCTTTATCCTCAGTCATTAGTTTCCTTTATT  145
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCCACTGTCATGACATTTGTCTTTAT-CTCAGTCATTAGTTTCCTTTATT  147

seq1  CCATCTTATTTCCATTACAGGGTTTGTTCTTTCTATTGTTATTTGTCACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTATTTCCATTACAGGGTTTGTTCTTTCTATTGTTATTTGTCACA  197

seq1  GTATCTATTTTAGTAACAGATATGATTATCAGAGCATCTCTTTTTACTTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTATTTTAGTAACAGATATGATTATCAGAGCATCTCTTTTTACTTC  247

seq1  CATTCTTCGTGTTATTTGAGCATTTGATGTCAGATTTGGTGTTGGGGACT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCGTGTTATTTGAGCATTTGATGTCAGATTTGGTGTTGGGGACT  297

seq1  ATACTAGACATCTCTGGACCATTGTAAGCTACTTTATTTATTCTAATAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGACATCTCTGGACCATTGTAAGCTACTTTATTTATTCTAATAAT  347

seq1  ATTAGGTCATTTTCCCCTCTTTTCCAGTGAAGAACAATCACAAAACATCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTCATTTTCCCCTCTTTTCCAGTGAAGAACAATCACAAAACATCC  397

seq1  ATATAGCCTTGTCTTTTATGATGTTGGGGACTTACTTTGTTTTTGGAGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCCTTGTCTTTTATGATGTTGGGGACTTACTTTGTTTTTGGAGGT  447

seq1  CACAGACTTAGAAGGACGTATCAGTGGCACAAGGTGAGTGAATGAAAAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTAGAAGGACGTATCAGTGGCACAAGGTGAGTGAATGAAAAAT  497

seq1  TTATAAATGTTTGCCCTGAACATGCGTGTTCAGGGAATGGATTATGTGAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGTTTGCCCTGAACATGCGTGTTCAGGGAATGGATTATGTGAC  547

seq1  TAGAGTCCCATGAAGATAAAGTGTTTATTTACTGAGGCTTGACTGTGTGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCCCATGAAGATAAAGTGTTTATTTACTGAGGCTTGACTGTGTGC  597

seq1  TCATATTTTACATTTTAATGGCATATTCTAAATGATGAGTACTTTATTTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTACATTTTAATGGCATATTCTAAATGATGAGTACTTTATTTC  647

seq1  ACTTCAAAGTTAGTACATTTCTACTGTGAACAAAATATAGTTCGTATACT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAGTTAGTACATTTCTACTGTGAACAAAATATAGTTCGTATACT  697

seq1  TTATTATTCGTGGTCTTTAGTGGTAGAATGGTATAGCAAAGCAAATGCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTCGTGGTCTTTAGTGGTAGAATGGTATAGCAAAGCAAATGCAT  747

seq1  TCTATTCTAAAATGGATTGATTACCTATGAAAACCTTACTAAAGAGCGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCTAAAATGGATTGATTACCTATGAAAACCTTACTAAAGAGCGAT  797

seq1  GGGGGAAGAAGAGGTTAATGAAAACATGGAATATATGTTCCCTTCACAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAGAAGAGGTTAATGAAAACATGGAATATATGTTCCCTTCACAAT  847

seq1  GCTGTCTCAGGTATAATCATCCAACATCTAATATGATTCTCAGATAACTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCAGGTATAATCATCCAACATCTAATATGATTCTCAGATAACTT  897

seq1  AAAAAAATAACAAAAGTTTGGTAGTGATCTCTGACTTACTAGAAGATGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAACAAAAGTTTGGTAGTGATCTCTGACTTACTAGAAGATGAT  947

seq1  GGGAAGCATTAGTTGGCAATTTTGGTTTCTATAGCAGAGGAATTAGTTAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCATTAGTTGGCAATTTTGGTTTCTATAGCAGAGGAATTAGTTAC  997

seq1  TTCTTCCTTAAGGCATATCTAATTCATAATTGTGGCTGAAAATGAACTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTAAGGCATATCTAATTCATAATTGTGGCTGAAAATGAACTCT  1047

seq1  AATCCTAGGAATTC  1059
      ||||||||||||||
seq2  AATCCTAGGAATTC  1061