BAC Information

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BAC

Clone NameB6Ng01-302N17
Chromosome4 (Build37)
Map Location 22,893,368 - 22,894,507
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
Downstream geneLOC625462, LOC383998, LOC100040464, LOC623873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302N17.bB6Ng01-302N17.g
ACCGA096801GA096802
length1,1381,154
definitionB6Ng01-302N17.b B6Ng01-302N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttggtacagcgacacagcaagagtgacacactgttttagaac
ttgccagagctccactaatgccaggaataggtaggaatatgacagtgtct
agaaaggggcctcgggtgaggaactgcgtacttagatatcagtagtactt
tgtgctattttccagtgtttacttagagtattgcttagaacaacccagtt
gtttaagggagccccaactgagttacccatgctctcattgctctgcttca
atgtaaactaaacaactgaaaaaagctgaagggaaaccttatcatagatg
tcaccatcatgcagacactggcaggagctgatggaagtcatggtcctgat
agttgttttcctgtaccatttaggatgatgacttcatgccttaaaaaaaa
taactgcattgagttctgctactaggaataataatggccacttgcaaaac
cctctgaaccctgaaaaccagaagctcagagaaaatcacagagaaaacca
aaacagtatgatatacaaaacaaacaaacaaaataattcacagttctgag
ttcaaaagtgaggggtatctgagtgtagggttatcttatccatcctatgt
cttgtataactgactcagctacagcacagcacaaagaggcataaagtaac
cctcatgacttgtcataaccaagctgtcttctgccaaagaattaaccaaa
ataaatcctgttggaggcaataatctaatgtatcatttgagtttaattat
aaaggggaaaaatttgagacttctttctttcaaacgaatagtacatttgt
gatgtttattaaggaagaagagataaagaaacaaagaaatgcagaactac
tgaaatttgaatgtccaaattaatatgcacatattagataggcagtaatt
taaaatgtaatcaggtcctaagtcatcaggcctgttatttagaaaatggc
attcaatgagatctatggcattgctgtaggacaatctgtactagatacag
cctaaccttaccagaaatcctacagtcacttccatgtagacaaatctgtg
catatatcaatagtcctcatccccatgcagaatacatggccctaaaatct
caacaagcatccatacttcaatgaccagcactaatcta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatatcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctcacctata
gtggaacaacatatgaactacagtaccccttgagctctttactctagctg
catatgttatcaaaaagaattgctagttcggtcatcactggaagagagtc
aatggacacgcaagacctttggtgtgtccctcgttatacaaggaggaaaa
aacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22893368_22894507
seq2: B6Ng01-302N17.b_48_1185 (reverse)

seq1  TAGATTAGTGCTGGTCACTG-AGTAT-GATGC-TGGTGAGAATTTTAGGC  47
      ||||||||||||||||| || ||||| ||||| || |||| |||||||| 
seq2  TAGATTAGTGCTGGTCATTGAAGTATGGATGCTTGTTGAG-ATTTTAGGG  49

seq1  CATTGTATCTTGCATGGGGATGAGGACTATTGATATATTGCACAGATTTT  97
      |  |||||  ||||||||||||||||||||||||||| |||||||| |||
seq2  CCATGTATTCTGCATGGGGATGAGGACTATTGATATA-TGCACAGA-TTT  97

seq1  GTCTACATGGAAGTGACTGTAGGGATTTCTTGTTAAGGTTAGGCTGTATC  147
      ||||||||||||||||||||| ||||||| || |||||||||||||||||
seq2  GTCTACATGGAAGTGACTGTA-GGATTTC-TGGTAAGGTTAGGCTGTATC  145

seq1  TAGTACAGATTGTCCTACAGCAATGCCATAGATCTCATTGAATGCCATTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAGATTGTCCTACAGCAATGCCATAGATCTCATTGAATGCCATTT  195

seq1  TCTAAATAACAGGCCTGATGACTTAGGACCTGATTACATTTTAAATTACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAACAGGCCTGATGACTTAGGACCTGATTACATTTTAAATTACT  245

seq1  GCCTATCTAATATGTGCATATTAATTTGGACATTCAAATTTCAGTAGTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCTAATATGTGCATATTAATTTGGACATTCAAATTTCAGTAGTTC  295

seq1  TGCATTTCTTTGTTTCTTTATCTCTTCTTCCTTAATAAACATCACAAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCTTTGTTTCTTTATCTCTTCTTCCTTAATAAACATCACAAATG  345

seq1  TACTATTCGTTTGAAAGAAAGAAGTCTCAAATTTTTCCCCTTTATAATTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTCGTTTGAAAGAAAGAAGTCTCAAATTTTTCCCCTTTATAATTA  395

seq1  AACTCAAATGATACATTAGATTATTGCCTCCAACAGGATTTATTTTGGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAATGATACATTAGATTATTGCCTCCAACAGGATTTATTTTGGTT  445

seq1  AATTCTTTGGCAGAAGACAGCTTGGTTATGACAAGTCATGAGGGTTACTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTGGCAGAAGACAGCTTGGTTATGACAAGTCATGAGGGTTACTT  495

seq1  TATGCCTCTTTGTGCTGTGCTGTAGCTGAGTCAGTTATACAAGACATAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTCTTTGTGCTGTGCTGTAGCTGAGTCAGTTATACAAGACATAGG  545

seq1  ATGGATAAGATAACCCTACACTCAGATACCCCTCACTTTTGAACTCAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAGATAACCCTACACTCAGATACCCCTCACTTTTGAACTCAGAA  595

seq1  CTGTGAATTATTTTGTTTGTTTGTTTTGTATATCATACTGTTTTGGTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATTATTTTGTTTGTTTGTTTTGTATATCATACTGTTTTGGTTTT  645

seq1  CTCTGTGATTTTCTCTGAGCTTCTGGTTTTCAGGGTTCAGAGGGTTTTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATTTTCTCTGAGCTTCTGGTTTTCAGGGTTCAGAGGGTTTTGC  695

seq1  AAGTGGCCATTATTATTCCTAGTAGCAGAACTCAATGCAGTTATTTTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCCATTATTATTCCTAGTAGCAGAACTCAATGCAGTTATTTTTTT  745

seq1  TAAGGCATGAAGTCATCATCCTAAATGGTACAGGAAAACAACTATCAGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATGAAGTCATCATCCTAAATGGTACAGGAAAACAACTATCAGGA  795

seq1  CCATGACTTCCATCAGCTCCTGCCAGTGTCTGCATGATGGTGACATCTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTTCCATCAGCTCCTGCCAGTGTCTGCATGATGGTGACATCTAT  845

seq1  GATAAGGTTTCCCTTCAGCTTTTTTCAGTTGTTTAGTTTACATTGAAGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGTTTCCCTTCAGCTTTTTTCAGTTGTTTAGTTTACATTGAAGCA  895

seq1  GAGCAATGAGAGCATGGGTAACTCAGTTGGGGCTCCCTTAAACAACTGGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGAGAGCATGGGTAACTCAGTTGGGGCTCCCTTAAACAACTGGG  945

seq1  TTGTTCTAAGCAATACTCTAAGTAAACACTGGAAAATAGCACAAAGTACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTAAGCAATACTCTAAGTAAACACTGGAAAATAGCACAAAGTACT  995

seq1  ACTGATATCTAAGTACGCAGTTCCTCACCCGAGGCCCCTTTCTAGACACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATCTAAGTACGCAGTTCCTCACCCGAGGCCCCTTTCTAGACACT  1045

seq1  GTCATATTCCTACCTATTCCTGGCATTAGTGGAGCTCTGGCAAGTTCTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTCCTACCTATTCCTGGCATTAGTGGAGCTCTGGCAAGTTCTAA  1095

seq1  AACAGTGTGTCACTCTTGCTGTGTCGCTGTACCAAGTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTGTCACTCTTGCTGTGTCGCTGTACCAAGTGAATTC  1138