BAC Information

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BAC

Clone NameB6Ng01-303B07
Chromosome4 (Build37)
Map Location 145,293,261 - 145,420,403
singlet/doubletdoublet
Overlap geneLOC100041379, LOC666351, LOC545704, 1700029I01Rik
Upstream geneLOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC666349
Downstream geneLOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303B07.bB6Ng01-303B07.g
ACCGA096968GA096969
length1,1571,153
definitionB6Ng01-303B07.b B6Ng01-303B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,293,261 - 145,294,436)(145,419,244 - 145,420,403)
sequence
gaattcatacagtagagaaaacttacaaaaatgcagtgaatgtgataaat
gctttactaataaaggcagactgagaattaatcagataatttatacattt
aaaaaaaccttacaagtattttgtatgtgataaatgcagtacccacaaca
tcagtctgacaaatcaacagatatttcaaacagtagagcaacattataaa
tgaaatgaatgagataatcctttaacaagaaatatcatcttaaaattcac
tggagaattcttccaaaagggaaacttttcaaatacattgacggtttgaa
tcctttattttggccaatctcttagaatgtaacagataatttatacaggc
aagaatcttaacaaatataatatatgctgaaatatctttgacttcatttc
agtgcagaaaaaatatgtaaaaaaattttttatgggaaaaatagttctcc
tggggaaatgtggcatatgttttacacgggtaatattcttttcaacagtc
agtgctctaaactagagaattattatgaatctgaaaacttttgaaaacct
tcatgcaatcttcaaatctaatgtcaactattatgctggcagtaactctg
aatatatgataatgaagaaacattttcattaaacttttacttgttcaccc
tcaaatattatatgatgaagtcaggtgtgaaagccagaagaatatgatgt
tgtgcaacaattcatggagatagaaatgatccattccagaaggaaactta
aagagtgtactatcgccttcaaaatgtctaataaaactggcagcattttg
tatatttaattcaaatgaagaaattgacacaaattatacttgatagagta
tttgacaaactgagccaccaagaatgcatgttcttaatcctataatacac
ctacagatgtgaagtgtgctttgagtatccagtattcattattcttatca
cgtcaatgtgacaaaatgatttattggtttcacgtttcagatagtgactg
actatgagtcccttatgctctgtcacatctctcctcattgccctgtaaat
aagctgatattttaacaaggttgactgctgtttcagttggcaactgataa
ttagatgaataaatgtgcatcatcgccttgactatctcataaagtaattt
gctgaag
gaattcttgagcatgcaaccacagaattgttgttgcgatctaaaagggcc
ataggcatgattttagcaggaatggctgtcctgatagtttctattatggt
tacagcaattgcttctgtgtccttagtgcaaagtatacacactgcagcat
atgttaatgacttcgctattagttacaaaagctgttgtttttcttcagaa
tgtatattctgagatgtgcaaaatattaagattccgtagatgatttaaga
aaagaatggaaatctattttattccttacggtagagtggagtacaccaca
atgtcttgtaatatgtatcaacggtcagcatttttcagagacctatagga
ctttcgttcaataaatgggaaataatgatcagttgttatcctataatgtg
aaccaagcatttgagaagaattattattactgaatactctaagcacactt
aacatctgtaagcatatttataggataaagaatatgctgtctgggtggct
cagtttgccagatattcttttaagtataatttttctcaattggctcattt
gaattaaatatacagaatgttaccagttttattagatattttgaggactg
cattaaaaaccttaaatagtttccttttgaaatggattatttctgtctca
atgaatgtggtacacaataatatctcctcacttcccaacttgtcttcatc
ttgtaacatttaagggtgaacaggtaaaaaggtgtcatgaaaagctttct
acatttttacattttcagagtttcttcaagcaaaaaatagttgacattat
ttaagatttgaacattgcatgaaagttttcacatgattttcataatcata
ctaattctctagtgtggagcctcaattgtcaagaatagaacgtgaataaa
acacaggccacactttccccaacagaaatactttcccctaaaagttatta
gatattctctttgacctgaaatgaagtcaagaatatttcttcataacatg
catgagttaagtttgttatcctgtagtatcactgtacattctaggaaata
tcagagtagggattcatacctttcaatatatggaaaagttctctttccgt
taagtattctctatgaatttttaagatgatatatccttggttaaaggcat
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145293261_145294436
seq2: B6Ng01-303B07.b_50_1206

seq1  GAATTCATACAGTAGAGAAAACTTACAAAAATGCAGTGAATGTGATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACAGTAGAGAAAACTTACAAAAATGCAGTGAATGTGATAAAT  50

seq1  GCTTTACTAATAAAGGCAGACTGAGAATTAATCAGATAATTTATACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTAATAAAGGCAGACTGAGAATTAATCAGATAATTTATACATTT  100

seq1  AAAAAAACCCTTACAAGTATTTTGTATGTGATAAATGCAGTACCCACAAC  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAA-CCTTACAAGTATTTTGTATGTGATAAATGCAGTACCCACAAC  149

seq1  ATCAGTCTGACAAATCAACAGATATTTCAAACAGTAGAGCAACATTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCTGACAAATCAACAGATATTTCAAACAGTAGAGCAACATTATAA  199

seq1  ATGAAATGAATGAGATAGTCCTTTAACAAGAAATATCATCTTAAAATTCA  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGAAATGAATGAGATAATCCTTTAACAAGAAATATCATCTTAAAATTCA  249

seq1  CTGGAGAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGACGGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGACGGTTTGA  299

seq1  ATCCTTTATTTTGGCCTATCTCTTAGAATGTAATAGATAATTTATACAGT  350
      |||||||||||||||| |||||||||||||||| ||||||||||||||| 
seq2  ATCCTTTATTTTGGCCAATCTCTTAGAATGTAACAGATAATTTATACAGG  349

seq1  CAAGAATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTT  399

seq1  CAGTGCAGAAAAAATATGTAAAAAAATTTTTTTATGGGAAAAATAGTTCT  450
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGTGCAGAAAAAATATGTAAAAAAA-TTTTTTATGGGAAAAATAGTTCT  448

seq1  CCTGGGGAAATGTGGCATATGTTTTACACGGGTAATATTCTTTTCAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGAAATGTGGCATATGTTTTACACGGGTAATATTCTTTTCAACAG  498

seq1  TCAGTGCTCTAAACTAGAGAATTATTATGAATCTGAAAACTTTTGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTCTAAACTAGAGAATTATTATGAATCTGAAAACTTTTGAAAAC  548

seq1  CTTCATGCAATGTTCAAATCTTAGATAATGTCAACTATTATGCTGGCAGT  600
      ||||||||||| ||||||||     |||||||||||||||||||||||||
seq2  CTTCATGCAATCTTCAAATC-----TAATGTCAACTATTATGCTGGCAGT  593

seq1  AACTCTGAATATATGATAGTGAAGAAACATTTTCATTAAACTTTTACTTG  650
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACTCTGAATATATGATAATGAAGAAACATTTTCATTAAACTTTTACTTG  643

seq1  TTCACCCTCAAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTCAAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAAT  693

seq1  ATGATGTTGTGCAACAATTCATGGAGATAGAAATGATCCATTCCAAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGATGTTGTGCAACAATTCATGGAGATAGAAATGATCCATTCCAGAAGG  743

seq1  AAACTAAATAAAGAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGG  800
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACT---TAAAGAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGG  790

seq1  CAGCATTTTGTATATTTAATTCAAATGAGGAAATTGACACAGATTGTACT  850
      |||||||||||||||||||||||||||| |||||||||||| ||| ||||
seq2  CAGCATTTTGTATATTTAATTCAAATGAAGAAATTGACACAAATTATACT  840

seq1  TGATAGTGTATTTGACAAACTGAGCCACCAAGACTGCATGTTCTTAATCC  900
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  TGATAGAGTATTTGACAAACTGAGCCACCAAGAATGCATGTTCTTAATCC  890

seq1  TATAATATGCCTACAGATATGAAGTGTGCTTTGAGTATCCAGTATTCATT  950
      |||||||  ||||||||| |||||||||||||||||||||||||||||||
seq2  TATAATACACCTACAGATGTGAAGTGTGCTTTGAGTATCCAGTATTCATT  940

seq1  ATTCTTATCACGTCAATGTGAC-AAATGATTTATTGGTTTCACGTTTCAG  999
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  ATTCTTATCACGTCAATGTGACAAAATGATTTATTGGTTTCACGTTTCA-  989

seq1  GATAGTGACTGACTATGAGTCCCTTATGCTCTGTCAACATCTCCTTCCTC  1049
      ||||||||||||||||||||||||||||||||||| |||||||  |||||
seq2  GATAGTGACTGACTATGAGTCCCTTATGCTCTGTC-ACATCTC--TCCTC  1036

seq1  ATTGCCCTGTAAATAAAGCTGAATATTTTAACAAGGTTGACTTGGCTGTT  1099
      |||||||||||||| |||||| ||||||||||||||||||||  |||| |
seq2  ATTGCCCTGTAAAT-AAGCTG-ATATTTTAACAAGGTTGACT--GCTG-T  1081

seq1  TTCAGTTTGC-ACTTATAATTAGATGAATAAATGTTGCATCATCGCTGGA  1148
      ||||||| || ||| ||||||||||||||||||| |||||||||||    
seq2  TTCAGTTGGCAACTGATAATTAGATGAATAAATG-TGCATCATCGCCTTG  1130

seq1  ACTATTTCTCATAAAGT-ATTTGCTGAAG  1176
      ||||  ||||||||||| |||||||||||
seq2  ACTA--TCTCATAAAGTAATTTGCTGAAG  1157

seq1: chr4_145419244_145420403
seq2: B6Ng01-303B07.g_69_1221 (reverse)

seq1  ACAAT-CCTTT-ACCAA-GATATATCATCTTAAAAATCATTAGAGAATAC  47
      ||||| ||||| ||||| |||||||||||||||||||   ||||||||||
seq2  ACAATGCCTTTAACCAAGGATATATCATCTTAAAAATTCATAGAGAATAC  50

seq1  TTACAGAAGAGA-AACTTTTCAATTATATCG-AAGGTATGAATCCTTTAC  95
      |||  | | ||| |||||||| | ||||| | |||||||||||||  |||
seq2  TTAACGGAAAGAGAACTTTTCCA-TATATTGAAAGGTATGAATCC-CTAC  98

seq1  TCTTGGCCTATTTCCTAGAATGTTAACAGTGAATACTTACAGGAT-ACAA  144
      |||     |||||||||||||||  |||||| |||| |||||||| ||||
seq2  TCT---GATATTTCCTAGAATGT--ACAGTG-ATAC-TACAGGATAACAA  141

seq1  ACTTAACTCATGCATTGTATGAAGAAATATCTTTGACTTCATTTCAGGTC  194
      |||||||||||||||  |||||||||||||  ||||||||||||||||||
seq2  ACTTAACTCATGCATGTTATGAAGAAATATTCTTGACTTCATTTCAGGTC  191

seq1  AAAGAGAATATCTAATAACTTTTTAGGGGAAAGTATTTCTGTTGGGGAAA  244
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAGAGAATATCTAATAAC-TTTTAGGGGAAAGTATTTCTGTTGGGGAAA  240

seq1  GTGTGGCCTGTGTTTTATTCACGTTCTATTCTTGACAACAATTGAGGCTC  294
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  GTGTGGCCTGTGTTTTATTCACGTTCTATTCTTG---ACAATTGAGGCTC  287

seq1  CACACTAGAGAATTAGTATGATTATGAAAATCATGTGAAAACTTTCATGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAGAGAATTAGTATGATTATGAAAATCATGTGAAAACTTTCATGC  337

seq1  AATGTTCAAATCTTAAATAATGTCAACTATTTTTTGCTTGAAGAAACTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCAAATCTTAAATAATGTCAACTATTTTTTGCTTGAAGAAACTCT  387

seq1  GAAAATGTAAAAATGTAGAAAGCTTTTCATGACACCTTTTTACTTGTTCA  444
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAAATGTAAAAATGTAGAAAGCTTTTCATGACACCTTTTTACCTGTTCA  437

seq1  CCCTTAAATGTTACAAGATGAAGACAAGTTGGGAAGTGAGGAGATATTAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAAATGTTACAAGATGAAGACAAGTTGGGAAGTGAGGAGATATTAT  487

seq1  TGTGTACCACATTCATTGAGACAGAAATAATCCATTTCAAAAGGAAACTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCACATTCATTGAGACAGAAATAATCCATTTCAAAAGGAAACTA  537

seq1  TTTAAGGTCTTTAATGCAGTCCTCAAAATATCTAATAAAACTGGTAACAT  594
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTTTTTAATGCAGTCCTCAAAATATCTAATAAAACTGGTAACAT  587

seq1  TCTGTATATTTAATTCAAATGAGCCAATTGAGAAAAATTATACTTAAAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATTTAATTCAAATGAGCCAATTGAGAAAAATTATACTTAAAAG  637

seq1  AATATCTGGCAAACTGAGCCACCCAGACAGCATATTCTTTATCCTATAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGGCAAACTGAGCCACCCAGACAGCATATTCTTTATCCTATAAA  687

seq1  TATGCTTACAGATGTTAAGTGTGCTTCGAGTATTCAGTAATAATAATTCT  744
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATGCTTACAGATGTTAAGTGTGCTTAGAGTATTCAGTAATAATAATTCT  737

seq1  TCTCAAATGCTTGGTTCACATTATAGGATAACAACTGATCATTATTTCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATGCTTGGTTCACATTATAGGATAACAACTGATCATTATTTCCC  787

seq1  ATTTATTAAACGAAAGTCCTATAGGTCTCTGAAAAATGCTGACCGTTGAT  844
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGAACGAAAGTCCTATAGGTCTCTGAAAAATGCTGACCGTTGAT  837

seq1  ACATATTACAAGACATTGTGGTGTACTCCACTCTACCGTAAGGAATAAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTACAAGACATTGTGGTGTACTCCACTCTACCGTAAGGAATAAAA  887

seq1  TAGATTTCCATTCTTTTCTTAAATCATCTACGGAATCTTAATATTTTGCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCCATTCTTTTCTTAAATCATCTACGGAATCTTAATATTTTGCA  937

seq1  CATCTCAGAATATACATTCTGAAGAAAAACAACAGCTTTTGTAACTAATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGAATATACATTCTGAAGAAAAACAACAGCTTTTGTAACTAATA  987

seq1  GCTAAGTCATTAACATATGCTGCAGTGTGTATACTTTGCACTAAGGACAC  1044
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGTCATTAACATATGCTGCAGTGTGTATACTTTGCACTAAGGACAC  1037

seq1  AGAAGCAATTGCTGTAACCATAATAGAAACTATCAGGACAGCCATTCCTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAATTGCTGTAACCATAATAGAAACTATCAGGACAGCCATTCCTG  1087

seq1  CTAAAATCATGCCTATGGCCCTTTTAGATCGCAACAACAATTCTGTGGTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCATGCCTATGGCCCTTTTAGATCGCAACAACAATTCTGTGGTT  1137

seq1  GCATGCTCAAGAATTC  1160
      ||||||||||||||||
seq2  GCATGCTCAAGAATTC  1153