MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-303F10
Chromosome	4 (Build37)
Map Location	17,684,417 - 17,685,138
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040154, LOC667212, LOC100040173
Downstream gene	Mmp16
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC667212 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040173 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Mmp16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17389 MGI:1276107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040173 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252104 GeneID:100040173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001474209.1

name	Mmp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254543 GeneID:17389 MGI:1276107
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 16 transcript_id : NM_019724.2

name	LOC100040173 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252105 GeneID:100040173
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474259.1

name	Mmp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254544 CCDS:CCDS17989.1 GeneID:17389 MGI:1276107
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : membrane-type-3 matrix metalloproteinase; Membrane type 3-MMP product : matrix metalloproteinase 16 protein_id : NP_062698.2

name	LOC100040154 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040154
definition	number : 1 pseudo : _no_value

name	LOC667212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667212
definition	number : 3 pseudo : _no_value

name	LOC667212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667212
definition	number : 2 pseudo : _no_value

name	LOC667212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667212
definition	number : 1 pseudo : _no_value

clone name	MSMg01-527H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-438A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-429J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-303F10.b	B6Ng01-303F10.g
ACC	GA097163	GA097164
length	1,127	1,165
definition	B6Ng01-303F10.b	B6Ng01-303F10.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttgtttagttctgtaccccatttttaatagggttatttgattt tctggagtccaacttatttatatatatatatatatatatatatatatata tatatatatatatatatattggatagtagtcccctatctgatttaggatt ggtaaagattgtctcccaatatggtgttggcctttttgtattattgacag tgtcttttgccttacagaagctttgaagctttgaagttttatgaggtccc atttgtcatttctcaatcttacagcacaagccattgctgttctgttcagg aattttccccctgttctcataactttgaggctttccccccactttctcct ctttaagtttcagtgtctccagttttatgtggagttccttgatccactta gacttgaggtttgtacaaggagataagaatggatcaattcacattcttct atatgataaccaccagttgtgccagcacaatttgttgaaaatgctgtctt ttttccactggatggttctagctcccttgtgaaagttcaagtgaccatgg gtgtgtgggttcatttctgggtcttcaattttattccattgatctacctt tctgtcattgtagcagtaccatgcagtttccatcacaattgctctgtagt acagcttgaggtcaggcatgatcattcccctgagaggttgttttattgtt gagagtagttttttgctgtctagaggttcttttattgttgagaaatagtt ttttgctgtcttaggttttttttttcttattccagatgaatttgcaaatt tcccttttctaacttgggtgaataattgagttgggaatgttgatggggat tatttcttcatttgtttccagggttaattttgacgtagaagatagtagaa ataattctgtatatgggccgaagaaagtgttcttccccaaagagcagcat aaatagtactaaaaaggcttataatagaaccctaccattggaaaaaattt taattaatgaattcttacccagttatagtaccctaggacccaacaattga acttaaaggtcacaaggaatatactaaaaaataaaaatgaatttactgac aagttatatttttagcaagtaccaata	gaattctcacctgaggaataccaaatggttgagaagcacctgaaaaaatg ttcaccatcctgaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccattcagaatggataagatcaaaaattcaggtgacagc agatgctggcgagaatgtggagaaagaggaacattcctccattgttggtg gaattgcaagcatgtacaaatactctggaaatcagtctggtggttcctca gaaacttggacatagtactactgaaggatcccgcaatacctctcctgggc atatatccaaaatatgttccaaccggtaagaaggacacatggtcaattat gttcagagcagccttatttgtaatatccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaagg gagtactactcagttattaaaatgaatgaatttatgaaatttctaggcaa atggatgggcctgatgggcatcatcctgagtgaggtaacccaatcacaaa agaactcacatgatatagactcactgatatagactcactgataagtggat attagaccagaaacttaaaatacccaagatacaagatacagtttgcaaaa cacatgaaactcaagaagaaagaaaagtgtggacactttgctccttctta gaattgggaacaaaacacccatgcaaggagttacagagacaaagtttgga gctgagatgaaaggatggaccatctagacactgccatacccggggatcca ttccataatcagtcttcaaacactgacactattgcacacactagcaagat tttgctgaaaggaccctgatatagctgtttcttgcaaggctatgctgggg cctagcaaacacagaagtggatgctcacagtcagctaatggatggatcac agggccccctatggaggagctagagaagtacccaaggagctaacacaata tcactaaccagtaccccaggagctctgtctctagctgcatatgtatcaga ggatctcttagtgggcattcagttgaaagagaaggccaattgttctgcaa ctttaatctgtctaggttacaggtaatgcagggctgatgtgtcgcgcgcg cgcccacacgcaact
quality values	Open. Hide. 49 22 27 35 58 58 58 58 58 58 58 58 41 26 54 62 62 62 49 49 62 62 62 62 62 54 47 62 62 62 62 47 25 21 24 22 16 32 24 21 24 38 44 56 56 46 44 59 62 62 62 62 62 62 49 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 50 48 48 48 48 48 48 54 54 54 54 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 56 36 54 46 59 59 59 59 56 59 51 49 59 59 59 59 59 50 59 56 49 56 59 56 51 59 51 49 62 59 59 59 62 62 59 59 62 62 59 59 59 62 62 59 62 62 62 59 59 50 51 59 56 62 62 59 51 62 56 56 62 62 59 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 56 62 50 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 44 43 56 56 62 62 62 62 62 62 62 62 38 43 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 41 62 62 62 62 49 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 54 42 62 52 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 54 54 58 52 58 54 58 58 46 52 54 58 58 58 50 54 58 58 58 58 42 54 58 58 58 39 58 58 58 32 45 58 58 54 58 58 58 58 58 58 58 58 54 54 52 58 58 58 52 58 53 54 58 49 45 52 49 58 50 54 54 58 54 43 58 58 54 54 52 52 58 58 49 53 45 58 58 58 58 52 53 54 50 54 50 51 43 50 33 53 53 52 54 58 49 58 32 32 58 40 52 50 34 47 33 50 53 53 53 53 53 39 54 49 50 50 48 50 50 49 54 39 53 52 58 21 48 49 42 48 49 47 52 51 58 54 49 49 50 51 37 53 39 23 48 28 24 58 54 58 58 10 29 50 50 49 33 43 42 53 31 49 31 25 15 21 50 24 42 34 43 50 50 50 36 15 13 34 42 22 25 58 22 32 41 16 19 58 52 50 52 30 40 39 33 54 39 43 50 47 35 12 20 13 51 49 51 51 54 54 54 54 39 39 39 31 32 32 24 28 25 18 16 33 21 31 44 34 37 54 49 32 45 53 54 12 41 54 54 45 54 19 7 54 53 32 47 18 18 33 33 35 47 19 54 25 27 33 33 31 15 25 33 18 51 30 38 28 40 54 18 51 20 41 31 32 47 22 22 31 35 31 51 46 40 32 9 6 40 27 32 46 40 9 6 19 21 21 8 52 25 32 9 18 7 11 11 14 8 53 32 15 15 33 19 16 36 34 28 19 23 21 13 30 35 9 13 46 18 26 15 45 31 31 32 15 32 51 10 28 18 31 25 31 31 43 38 26 30 15 9 25 25 46 21 8 46 16 28 30 15 31 42 30 25 26 9 7 12 17 7 19 25 29 40 42 41 46 20 21 42 18 31 31 14 25 29 31 17 30 27 31 27 25 36 11 18 31 26 31 39 27 12 11 13 9 23 7 12 27 24 17 29 31 12 24 27 11 46 21 32 26 39 16 8 9 19 39 10 22 44 41 44 36 19 7 5 5 5 7 14 30 25 16 16 24 14 6 9 11 6 7 20 44 17 36 44 38 22 18 12 16 10 9 13 32 34 6 9 36 17 31 28 18 14 16 13 7 4 4 9 6 8 17 14 22 32 14 9 19 11 7 6 7 5 6 6 20 34 10 19 20 8 11 7 22 21 10 9 7 11 31 21 13 15 10 28 30 12 17 12 28 29 30 14 24 28 10 29 13 28 17 19 28 24 32 17 8 6 30 11 32 28 14 7 5 20 18 10 16 8 4 4 11 5 7 4 4 16 24 27 5 27 8 9	Open. Hide. 46 35 43 39 62 62 62 47 62 49 62 24 22 15 10 24 19 22 36 34 21 21 23 27 28 28 45 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 54 54 62 62 62 59 62 62 62 59 62 50 51 46 31 30 43 59 56 54 54 42 46 50 62 54 32 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 54 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 46 62 62 62 54 54 58 58 58 58 58 49 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 45 54 58 58 43 44 58 58 58 54 54 58 58 58 58 54 58 58 58 58 58 58 58 58 54 52 54 58 54 42 58 52 58 51 51 58 54 50 58 58 58 52 58 53 58 58 58 47 41 58 54 58 58 53 51 58 58 58 58 52 54 52 58 51 58 51 53 58 52 58 58 58 51 53 53 53 58 52 58 47 58 58 40 54 58 58 51 51 51 58 53 53 58 58 53 49 42 51 58 49 52 53 49 51 42 53 58 58 49 52 53 51 51 58 58 42 50 52 51 58 42 50 58 50 51 39 50 51 40 54 52 38 39 52 50 40 51 53 54 54 51 40 35 36 54 49 49 51 50 37 52 54 51 54 44 36 54 52 46 46 42 54 51 37 54 54 53 42 47 54 54 52 40 47 53 37 54 47 37 33 31 35 51 54 42 44 40 47 31 47 38 52 40 45 41 41 32 51 49 35 53 53 54 42 29 28 38 32 49 49 52 52 40 40 49 40 32 42 35 53 53 34 32 53 46 32 32 53 37 42 37 31 40 28 34 39 45 52 42 32 52 53 32 40 25 30 26 31 42 30 46 18 33 28 30 31 51 45 31 51 33 26 51 40 29 18 36 34 32 31 30 43 30 32 30 22 31 36 45 31 45 19 31 31 23 46 31 31 48 46 31 31 28 31 43 30 23 29 24 30 31 31 31 31 31 32 34 32 38 43 38 42 31 32 46 31 30 31 31 31 42 31 28 24 28 36 31 39 31 32 27 31 31 26 27 23 32 26 31 15 37 36 36 29 37 23 46 46 26 30 25 30 35 41 48 32 29 30 24 11 47 31 27 32 28 25 21 32 29 32 34 32 31 26 48 29 34 32 28 30 20 31 9 25 22 15 35 31 31 31 34 36 31 43 43 24 10 25 32 32 23 24 30 48 24 19 21 29 27 33 38 30 15 15 12 26 8 12 32 21 29 32 27 22 22 19 21 34 27 21 32 32 20 16 31 21 26 14 20 26 26 16 29 31 24 25 17 19 43 11 4 29 33 36 29 21 21 25 14 26 17 14 10 23 10 28 28 24 20 24 19 30 25 9 14 26 28 30 16 8 11 24 20 28 20 28 13 21 7 9 31 11 8 10 32 27 28 19 30 8 10 11 18 15 13 17 17 27 28 31 40 40 30 19 15 6 21 9 28 17 6 11 7 11 20 19 13 10 16 10 21 18 19 23 13 17 17 20 16 21 20 23 20 20 12 28 4 5 14 14 10 18 24 4 6 12 1 3 1 17 3 3 2 6 14 17 19 5 4 5 3 3 13 10 12 6 4 4 22 5 4 15 18 4 4 14 7 5 3 5 6 3 5 8 8 9 13 10 28 25 10 7 4 7 8 14 5 4 7 12 7 15 6 4 5 13 1 3 3 1 3 2 7 6 7 3 2 26 3 3 2 2 5 2 2 3 4 4 12 6 4 4 1 3 3 8 4 22 8 7 4 7 4 6 4 3 3 2 1 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_17684417_17685138
seq2: B6Ng01-303F10.b_419_1171

seq1  TTATGTGGAGTTCCTTGATCCACTTAGACTTGAGGTTTGTACAAGGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGAGTTCCTTGATCCACTTAGACTTGAGGTTTGTACAAGGAGAT  50

seq1  AAGAATGGATCAATTCACATTCTTCTATATGATAACCACCAGTTGTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGATCAATTCACATTCTTCTATATGATAACCACCAGTTGTGCCA  100

seq1  GCACAATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTCTAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTCTAGCTC  150

seq1  CCTTGTGAAAGTTCAAGTGACCATGGGTGTGTGGGTTCATTTCTGGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAAAGTTCAAGTGACCATGGGTGTGTGGGTTCATTTCTGGGTCT  200

seq1  TCAATTTTATTCCATTGATCTACCTTTCTGTCATTGTAGCAGTACCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTATTCCATTGATCTACCTTTCTGTCATTGTAGCAGTACCATGC  250

seq1  AGTTTCCATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGGCATGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGGCATGATCA  300

seq1  TTCCCCTGAGAGGTTGTTTTATTGTTGAGAGTAG-TTTTTGCTGTCTAGA  349
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCCCCTGAGAGGTTGTTTTATTGTTGAGAGTAGTTTTTTGCTGTCTAGA  350

seq1  GGTTCTTTTATTGTTGAG-AATAG-TTTTTGCTGTCTTAGG-TTTTTTTT  396
      |||||||||||||||||| ||||| |||||||||||||||| ||||||||
seq2  GGTTCTTTTATTGTTGAGAAATAGTTTTTTGCTGTCTTAGGTTTTTTTTT  400

seq1  TCTTATTCCAGATGAATTTGCAAATTTCCC-TTTCTAACTT-GGTGAATA  444
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TCTTATTCCAGATGAATTTGCAAATTTCCCTTTTCTAACTTGGGTGAATA  450

seq1  ATTGAGTT-GGAATGTTGATGGGGATTATTTC-TCA-TTGTTACCAGG--  489
      |||||||| ||||||||||||||||||||||| ||| ||||| |||||  
seq2  ATTGAGTTGGGAATGTTGATGGGGATTATTTCTTCATTTGTTTCCAGGGT  500

seq1  TAATTTTGACGTAGAAGATAGTAG-AATAATTCTGTATAT-GGCCGA--G  535
      |||||||||||||||||||||||| ||||||||||||||| ||||||   
seq2  TAATTTTGACGTAGAAGATAGTAGAAATAATTCTGTATATGGGCCGAAGA  550

seq1  AAGTG-TCCTCCCCAAAGAGCAGCATAAATAGTACT-AAAAGGC-TATAA  582
      ||||| || ||||||||||||||||||||||||||| ||||||| |||||
seq2  AAGTGTTCTTCCCCAAAGAGCAGCATAAATAGTACTAAAAAGGCTTATAA  600

seq1  TAGAA-CCTACCATTGGAAAAAATTGTAATTAATGA--TCTTACCCAGTT  629
      ||||| ||||||||||||||||||| ||||||||||  ||||||||||||
seq2  TAGAACCCTACCATTGGAAAAAATTTTAATTAATGAATTCTTACCCAGTT  650

seq1  ATAGTA-CCTAGGAACCACAACAAT--GACT--AAAGTCACAAG--ATAT  672
      |||||| |||||||  | |||||||   |||  || ||||||||  ||||
seq2  ATAGTACCCTAGGA--CCCAACAATTGAACTTAAAGGTCACAAGGAATAT  698

seq1  ACTAAAAAAT-AAAATGAA-TTACTGACAA-TTATA-TTTTAGC-AGTAC  717
      |||||||||| |||||||| |||||||||| ||||| ||||||| |||||
seq2  ACTAAAAAATAAAAATGAATTTACTGACAAGTTATATTTTTAGCAAGTAC  748

seq1  CAATA  722
      |||||
seq2  CAATA  753

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information