BAC Information

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BAC

Clone NameB6Ng01-303H14
Chromosome4 (Build37)
Map Location 119,033,677 - 119,152,069
singlet/doubletdoublet
Overlap gene1700041C02Rik, LOC100041471, Ppcs, Zmynd12, BC057371
Upstream geneHyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, Ldha-ps2
Downstream geneLOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3, Edn2, Foxo6, Scmh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303H14.bB6Ng01-303H14.g
ACCGA097266GA097267
length1,1081,041
definitionB6Ng01-303H14.b B6Ng01-303H14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,033,677 - 119,034,799)(119,151,052 - 119,152,069)
sequence
gaattcataaaataaggattaaataccaaccaagaagggctctggggagc
cagttcgctattcttccttgggacagggtgagagctgcttgctttctggg
ggctgttagcggagggaagcaatctgggaagcagcaggatcaagctctag
gtgggcagtagttctcaaccttccaaaggctgtgaccctttactatcttc
ctcatgtgtgtgaccccagctataaaatcattttcactgctacttcctgt
tattatgctactgctatgacttgtaatgtaacatctgtgttttctgatgg
tcttaggttagggtaactctgtgaaaaggttgctcaacttccaagtgggc
cgagacccacaggttgagaactactgctctataggctgttgacctgggtt
taatcacttctgcgatgtgggcaaataccatctaccttgttcctaactaa
ggcctctgtttttccacaataagatggacagattatattcctactccatt
atgtcacttaatgaacatgggtaaccggtttagtgcagtacccacagcac
agcaatatacccaaaatgctagaaaaacattttaagcctaccaagctaat
tctgcttacaacttggttcaagaacagtaaaaaaaagaaacctcacctgg
actagtgttaaccagatcatcagcacccacagctgacatcacaaaatact
tctgactgataaacgctcattcttgcccgtgtgagaggctaccacgattc
tttccctatttataagcattcggaaaggtctggcatctggcttgtctgtt
gttaaaattgtacatttagtaagattaagctaggggggctggagagatgg
ctcagtgtttaagagtcctgactgctcttccaaaggtccaattcccagca
accacgtggtggctcacaaccatctgtaatgggatctaatgccctcttct
ggcgtgtctgaagacagctatagtgcactcatatataaataatcttaaaa
ataaagagatgattagctatatagcaccttactagctactagatactaca
atctgcatcagggtgagacagcacacacaccactaatgtagagagagaga
gagcagag
gaattctccgcagaagttcttcagtaacgtgttggctgctcagggttctc
tgaatcttcacattaagttgaggccctggttagcccagagtcaagcagac
agcctcagatctttccacttgtatacgttacagtatcttctaataagtgt
tatttaatgaatattgagttcaatatttgttaagtattgaattgattttt
ttgtagacattttaaactttggtttgtaataaatatacacatgaggccgg
gcatggtggcgcacacctttaatcccagcacttgggaggcagaggcaggc
ggatttctgagttcgaggccagcctggtctacaaagtgagttccaggata
gccagggctatacagagaaaccctgtctcgaaagaccaaaaaaaaaatat
atatatatatatatatatatatacacacacacacacacacacacgaaaaa
aagcattctggtaaatgtagataaagaaaggggggataaaaaggctggtc
ataggagcccatgacaataaccctgttataggggtgctaaggcaagagta
tagtatagtgtagttgtgaggcaaagccacatgggctacttagtgaggtc
agcctgggctacgtagcaaagacactgaagagaaagagagagaaggggag
agagagagagagagagtatttgtaaccctgttctcaatgtttaaaatgtg
tatttctttttcctttttccccaacctgcatctgtttacatagttgagtt
tcatagtaagttgggttaagccaaccctgggagttaaaccccagacattt
gcacgtgttagtgtaaacactttacattagcagatctagagtcctatttt
ctccatctaacactgatatttgcattatgcaaatgtaactgtatgtttca
taaagattgttcttagctgagtgtggtatagcataaagcctggagtctca
accccagagggcagaaggatcgagagtttgagcctagtctgggcaacatc
aatagaatcctatttttttaacaaaatgaaaaccaaacgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119033677_119034799
seq2: B6Ng01-303H14.b_43_1150

seq1  GAATTCATAAAATAAGGATTAAATACCAACCAAGAAGGGCTCTGGGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAATAAGGATTAAATACCAACCAAGAAGGGCTCTGGGGAGC  50

seq1  CAGTTCGCTATTCTTCCTTGGGACAGGGTGAGAGCTGCTTGCTTTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCGCTATTCTTCCTTGGGACAGGGTGAGAGCTGCTTGCTTTCTGGG  100

seq1  GGCTGTTAGCGGAGGGAAGCAATCTGGGAAGCAGCAGGATCAAGCTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTAGCGGAGGGAAGCAATCTGGGAAGCAGCAGGATCAAGCTCTAG  150

seq1  GTGGGCAGTAGTTCTCAACCTTCCAAAGGCTGTGACCCTTTACTATCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGTAGTTCTCAACCTTCCAAAGGCTGTGACCCTTTACTATCTTC  200

seq1  CTCATGTGTGTGACCCCAGCTATAAAATCATTTTCACTGCTACTTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTGTGTGACCCCAGCTATAAAATCATTTTCACTGCTACTTCCTGT  250

seq1  TATTATGCTACTGCTATGACTTGTAATGTAACATCTGTGTTTTCTGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGCTACTGCTATGACTTGTAATGTAACATCTGTGTTTTCTGATGG  300

seq1  TCTTAGGTTAGGGTAACTCTGTGAAAAGGTTGCTCAACTTCCAAGTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTTAGGGTAACTCTGTGAAAAGGTTGCTCAACTTCCAAGTGGGC  350

seq1  CGAGACCCACAGGTTGAGAACTACTGCTCTATAGGCTGTTGACCTGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACCCACAGGTTGAGAACTACTGCTCTATAGGCTGTTGACCTGGGTT  400

seq1  TAATCACTTCTGCGATGTGGGCAAATACCATCTACCTTGTTCCTAACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTTCTGCGATGTGGGCAAATACCATCTACCTTGTTCCTAACTAA  450

seq1  GGCCTCTGTTTTTCCACAATAAGATGGACAGATTATATTCCTACTCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGTTTTTCCACAATAAGATGGACAGATTATATTCCTACTCCATT  500

seq1  ATGTCACTTAATGAACATGGGTAACCGGTTTAGTGCAGTACCCACAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTTAATGAACATGGGTAACCGGTTTAGTGCAGTACCCACAGCAC  550

seq1  AGCAATATACCCAAAATGCTAGAAAAACATTTTAAGCCTACCAAGCTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATACCCAAAATGCTAGAAAAACATTTTAAGCCTACCAAGCTAAT  600

seq1  TCTGCTTACAACTTGGTTCAAGAACAGTAAAAAAAAGAAACCTCACCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTACAACTTGGTTCAAGAACAGTAAAAAAAAGAAACCTCACCTGG  650

seq1  ACTAGTGTTAACCAGATCATCAGCACCCACAGCTGACATCACAAAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGTTAACCAGATCATCAGCACCCACAGCTGACATCACAAAATACT  700

seq1  TCTGACTGATAAACGCTCATTCTTGCCCGTGTGAGAGGCTACCACGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGATAAACGCTCATTCTTGCCCGTGTGAGAGGCTACCACGATTC  750

seq1  TTTCCCTATTTATAAGCATTCGGAAAGGTCTGGCATCTGGCTTGTCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATTTATAAGCATTCGGAAAGGTCTGGCATCTGGCTTGTCTGTT  800

seq1  GTTAAAATTGTACATTTAGTAAGATTAAGCTAGGGGGGCTGGAGAGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATTGTACATTTAGTAAGATTAAGCTAGGGGGGCTGGAGAGATGG  850

seq1  CTCAGTGTTTAAGAGTCCTGACTGCTCTTCCAAAGGTCCAATTCCCAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTTTAAGAGTCCTGACTGCTCTTCCAAAGGTCCAATTCCCAGCA  900

seq1  ACCACGTGGTGGCTCACAACCATCTGTAATGGGATCTAATGCCCTCTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGTGGTGGCTCACAACCATCTGTAATGGGATCTAATGCCCTCTTCT  950

seq1  GGCGTGTCTGAAGACAGCTATAGTGCACTCATATAATAAAATAAATCTTA  1000
      |||||||||||||||||||||||||||||||||| |||||   |||||||
seq2  GGCGTGTCTGAAGACAGCTATAGTGCACTCATAT-ATAAA--TAATCTTA  997

seq1  AAAATAAAAGAAGATGATTAAGCTAATATAGCACCTTACTAGCCTTACTA  1050
      ||||||||   |||||||| |||| ||||||||||||||||||  |||||
seq2  AAAATAAA--GAGATGATT-AGCT-ATATAGCACCTTACTAGC--TACTA  1041

seq1  GATACTACCATCTGGCATCAGGGGTGAAGAACAGCACACACACACACACA  1100
      |||||||| |||| |||||| ||||||   |||||||||||||   ||| 
seq2  GATACTACAATCT-GCATCA-GGGTGA--GACAGCACACACAC---CACT  1084

seq1  CAGGGAGAGAGAGAGAGAG-AGAG  1123
       | | |||||||||||||| ||||
seq2  AATGTAGAGAGAGAGAGAGCAGAG  1108

seq1: chr4_119151052_119152069
seq2: B6Ng01-303H14.g_67_1107 (reverse)

seq1  ATCGTTTG--TTTCATTTTGTT--TAAAATAGGA-TCTTATGATGTTGCC  45
      ||||||||  ||||||||||||   ||||||||| |||  ||||||||||
seq2  ATCGTTTGGTTTTCATTTTGTTAAAAAAATAGGATTCTATTGATGTTGCC  50

seq1  CAGACTA-GCTCAAACTCTCGATCC-TCTG-CCTCTGGGGTTGAGACTCC  92
      ||||||| ||||||||||||||||| |||| |||||||||||||||||||
seq2  CAGACTAGGCTCAAACTCTCGATCCTTCTGCCCTCTGGGGTTGAGACTCC  100

seq1  AGGC-TTATGCTATACCACACTCAGCTA--GACAATCTTTATG-AACATA  138
      |||| |||||||||||||||||||||||   |||||||||||| ||||||
seq2  AGGCTTTATGCTATACCACACTCAGCTAAGAACAATCTTTATGAAACATA  150

seq1  CAGTTACATTTTGCAT-ATGCAAATATCAGTGTTAGATGGAG-AAATAGG  186
      |||||||| ||||||| ||||||||||||||||||||||||| |||||||
seq2  CAGTTACA-TTTGCATAATGCAAATATCAGTGTTAGATGGAGAAAATAGG  199

seq1  ACTCTAGATCTGCT-ATGTAAAGTGTTTAC-CTAACACGTGC-AATGTCT  233
      |||||||||||||| ||||||||||||||| ||||||||||| |||||||
seq2  ACTCTAGATCTGCTAATGTAAAGTGTTTACACTAACACGTGCAAATGTCT  249

seq1  -GGGTTTAACTCCCA-GGTTGGCTTAA-CCAACTTACTATG-AACTCAAC  279
       |||||||||||||| ||||||||||| ||||||||||||| ||||||||
seq2  GGGGTTTAACTCCCAGGGTTGGCTTAACCCAACTTACTATGAAACTCAAC  299

seq1  TATGTAAACAGATGCAGGTTGGGGAAAA--GGAAAAGAAATACACATTTT  327
      ||||||||||||||||||||||||||||  | ||||||||||||||||||
seq2  TATGTAAACAGATGCAGGTTGGGGAAAAAGGAAAAAGAAATACACATTTT  349

seq1  AAACATTGAGAACAGGGTTACAAATACTCTCTCTCTCTCTCTCTCCCCTT  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGAGAACAGGGTTACAAATACTCTCTCTCTCTCTCTCTCCCCTT  399

seq1  CTCTCTCTTTCTCTTCAGTGTC-TTGCTACGTAGCCCAGGCTGACCTCAC  426
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCTCTCTTTCTCTTCAGTGTCTTTGCTACGTAGCCCAGGCTGACCTCAC  449

seq1  TAAGTAGCCCATGTGGCTTTGCCTCACAACTACACTATACTATACTCTTG  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGCCCATGTGGCTTTGCCTCACAACTACACTATACTATACTCTTG  499

seq1  CCTTAGCACCCCTATAACAGGGTTATTGTCATGGGCTCCTATGACCAGCC  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCACCCCTATAACAGGGTTATTGTCATGGGCTCCTATGACCAGCC  549

seq1  TTTTTATCCCCCCTTTCTTTATCTACATTTACCAGAATGCTTTTTTTCGT  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCCCCCCTTTCTTTATCTACATTTACCAGAATGCTTTTTTTCGT  599

seq1  GTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTT  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATTTTT  649

seq1  TTTTTGGTCTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTATCCTGG  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTCTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTATCCTGG  699

seq1  AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCT  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCT  749

seq1  CTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCCTC  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCCTC  799

seq1  ATGTGTATATTTATTACAAACCAAAGTTTAAAATGTCTACAAAAAAATCA  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATATTTATTACAAACCAAAGTTTAAAATGTCTACAAAAAAATCA  849

seq1  ATTCAATACTTAACAAATATTGAACTCAATATTCATTAAATAACACTTAT  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATACTTAACAAATATTGAACTCAATATTCATTAAATAACACTTAT  899

seq1  TAGAAGATACTGTAACGTATACAAGTGGAAAGATCTGAGGCTGTCTGCTT  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGATACTGTAACGTATACAAGTGGAAAGATCTGAGGCTGTCTGCTT  949

seq1  GACTCTGGGCTAACCAGGGCCTCAACTTAATGTGAAGATTCAGAGAACCC  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGGCTAACCAGGGCCTCAACTTAATGTGAAGATTCAGAGAACCC  999

seq1  TGAGCAGCCAACACGTTACTGAAGAACTTCTGCGGAGAATTC  1018
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCCAACACGTTACTGAAGAACTTCTGCGGAGAATTC  1041