BAC Information

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BAC

Clone NameB6Ng01-304O15
Chromosome4 (Build37)
Map Location 30,940,862 - 30,941,977
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665185, LOC619906, LOC100040864
Downstream geneLOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304O15.bB6Ng01-304O15.g
ACCGA098338GA098339
length1,1811,098
definitionB6Ng01-304O15.b B6Ng01-304O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgtttatctctgagccccatttttcaatggggttatttgatt
ttctgaagtccgccttcttgagttctttatatatattggatattagtcct
ctatctgatttaggattggtaaagctcctttcccaatctgttgatgcctt
ttttgtctcattgatggtgtcttttgccttacagaagctttgcagtttca
tgagggcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctattcaggaattttttcccctgtgccaatatcttcgaggcttttccaca
ctttctcctctataagtttcagtgtctctggttttatgtggagctccttg
atccacgtagattagaccttagtacaaggagataggattggatcaatttg
cattcttctacatgataaccatcagttgtgccagcaccatttgttgaaaa
tgctgtctttttttccactggatggttttagcttccttgtcgaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccatgccgtttttatcacagat
gctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaggttttttattattccaga
tgaatttgcagattgttctttctaattcattgaagaattgagttggaatt
ttgatggggattgcattgaatctatagattgcttttggcaagatagccat
ttttacattgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagttcttatca
cacagttctttcacgtccttagttagagtcacgccaggtattttatactt
tgtgactatgagaaggtgttgtttcctatttctttctcagctgttatctt
tgtgtacagaaaggcatgactgttgagtatttatatcagctactcaccgg
agctgtttacagtttagggagtcttcttggtgatttcagttcacttatat
atactactccttctatctgccaaagtaaattggacatctgacatggatcc
tgatgcatgttgccgatgtctcggcatagag

gaattcacagctgagtaagactattgatgtgaagtgtctaagttattgct
tctatccccaccaagtagtgctgctcacaactttggtcagagaagcttct
ttttgcagtgagcaaatgaccacaaggaactcatagctcctcagagtact
aaaaaatgtgactgatgaattgttagacataatgaaacatatatgtcatt
caaactaggttcagagaattgtgtagaagaaactgtagaaagaatataac
aagaggaagagaggctggactactgagggatattgtcttcttgacataat
gtggcagttgtgtttcttttgatgtgatgtgactttgctcttgaaatcac
agcagctatgatttctacacagacctgcagaatcctgcgatcatccacat
catgtcaagtacttagcagagtctcatgagaccagaatctaccctgaaga
tctatgcatagttaatgggaaaggaagagacattattccaaagttaaacc
ggaggtcccacgtctattctttagtaaataacctttcttccaagatcatt
taagtgagtgttatgaaagaaaaaaagggggggggggggcaacagcaata
gcacaaagacatgaaagttgaatcaatgagaacaggcaggagataagagg
ccttaaaaagaaggcaagtagagatgactcagcattaaagagcttttgta
ggcaaccagggttttggatcccagcacgtatttaacaagcggtatgtata
gcacccacttacaaccctgtcttgaggaagacagagaaagaaagatcact
ggagttttctagtttctagtatagtcaagaaagtttaggaagagactgtg
actcaaaagaataggtagaaagcgaaagaggagattatctgaaatatata
tatataaattggtataaagatatttacatacatgggatgcaaaaaaccac
caacaaattaaataaatcaggtaaaggataagttttctaaaacagcaaga
tatcatctttgaatatggtatcaccaggtaaccataaatactattttcta
aagcattaaatacttcaataccttcttgtagtatttgacagtagacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30940862_30941977
seq2: B6Ng01-304O15.g_72_1169 (reverse)

seq1  TAGTCTACCTCTTCAAAATTACTACAAGAAAGTATTTTAAAGTATTTTAA  50
      ||||||||    |||||  ||||||||||| |||  || ||||| |||||
seq2  TAGTCTAC--TGTCAAA--TACTACAAGAAGGTA--TTGAAGTA-TTTAA  43

seq1  TGGTTTTAGAAAATAGTATTTTATGTTTAACTTGTTGATAACCAATATCA  100
      | | |||||||||||||| |||||| || || || |||||  | ||||  
seq2  T-GCTTTAGAAAATAGTA-TTTATGGTT-ACCTGGTGATA--CCATATTC  88

seq1  AAAGATGATTAATCTTGGCTGTTTTTAAGGAAAACTTTATTCTTTTTACT  150
      |||||||||  ||||| ||||||||    ||||||||   || |||  ||
seq2  AAAGATGAT--ATCTT-GCTGTTTT---AGAAAACTT--ATCCTTTACCT  130

seq1  GATTTATTT-ATTTGTTGGTTGGTTTTTTTGCAT-CCATGTATGTAAATA  198
      ||||||||| ||||||||||  | |||||||||| |||||||||||||||
seq2  GATTTATTTAATTTGTTGGT--GGTTTTTTGCATCCCATGTATGTAAATA  178

seq1  TCTTTATACCAATTTATATATATATATTTCAGATAATCTCCTCTTTCGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATACCAATTTATATATATATATTTCAGATAATCTCCTCTTTCGCT  228

seq1  TTCTACCTATTCTTTTGAGTCACAGTCTCTTCCTAAACTTTCTTGACTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTATTCTTTTGAGTCACAGTCTCTTCCTAAACTTTCTTGACTAT  278

seq1  ACTAGAAACTAGAAAACTCCAGTGATCTTTCTTTCTCTGTCTTCCTCAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAACTAGAAAACTCCAGTGATCTTTCTTTCTCTGTCTTCCTCAAG  328

seq1  ACAGGGTTGTAAGTGGGTGCTATACATACCGCTTGTTAAATACGTGCTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTGTAAGTGGGTGCTATACATACCGCTTGTTAAATACGTGCTGG  378

seq1  GATCCAAAACCCTGGTTGCCTACAAAAGCTCTTTAATGCTGAGTCATCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAAACCCTGGTTGCCTACAAAAGCTCTTTAATGCTGAGTCATCTC  428

seq1  TACTTGCCTTCTTTTTAAGGCCTCTTATCTCCTGCCTGTTCTCATTGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCCTTCTTTTTAAGGCCTCTTATCTCCTGCCTGTTCTCATTGATT  478

seq1  CAACTTTCATGTCTTTGTGCTATTGCTGTTG--CCCCCCCCCCCTTTTTT  546
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  CAACTTTCATGTCTTTGTGCTATTGCTGTTGCCCCCCCCCCCCCTTTTTT  528

seq1  TCTTTCATAACACTCACTTAAATGATCTTGGAAGAAAGGTTATTTACTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATAACACTCACTTAAATGATCTTGGAAGAAAGGTTATTTACTAA  578

seq1  AGAATAGACGTGGGACCTCCGGTTTAACTTTGGAATAATGTCTCTTCCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGACGTGGGACCTCCGGTTTAACTTTGGAATAATGTCTCTTCCTT  628

seq1  TCCCATTAACTATGCATAGATCTTCAGGGTAGATTCTGGTCTCATGAGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTAACTATGCATAGATCTTCAGGGTAGATTCTGGTCTCATGAGAC  678

seq1  TCTGCTAAGTACTTGACATGATGTGGATGATCGCAGGATTCTGCAGGTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAAGTACTTGACATGATGTGGATGATCGCAGGATTCTGCAGGTCT  728

seq1  GTGTAGAAATCATAGCTGCTGTGATTTCAAGAGCAAAGTCACATCACATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAAATCATAGCTGCTGTGATTTCAAGAGCAAAGTCACATCACATC  778

seq1  AAAAGAAACACAACTGCCACATTATGTCAAGAAGACAATATCCCTCAGTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACACAACTGCCACATTATGTCAAGAAGACAATATCCCTCAGTA  828

seq1  GTCCAGCCTCTCTTCCTCTTGTTATATTCTTTCTACAGTTTCTTCTACAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCCTCTCTTCCTCTTGTTATATTCTTTCTACAGTTTCTTCTACAC  878

seq1  AATTCTCTGAACCTAGTTTGAATGACATATATGTTTCATTATGTCTAACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTGAACCTAGTTTGAATGACATATATGTTTCATTATGTCTAACA  928

seq1  ATTCATCAGTCACATTTTTTAGTACTCTGAGGAGCTATGAGTTCCTTGTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGTCACATTTTTTAGTACTCTGAGGAGCTATGAGTTCCTTGTG  978

seq1  GTCATTTGCTCACTGCAAAAAGAAGCTTCTCTGACCAAAGTTGTGAGCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGCTCACTGCAAAAAGAAGCTTCTCTGACCAAAGTTGTGAGCAG  1028

seq1  CACTACTTGGTGGGGATAGAAGCAATAACTTAGACACTTCACATCAATAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTGGTGGGGATAGAAGCAATAACTTAGACACTTCACATCAATAG  1078

seq1  TCTTACTCAGCTGTGAATTC  1116
      ||||||||||||||||||||
seq2  TCTTACTCAGCTGTGAATTC  1098


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