BAC Information

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BAC

Clone NameB6Ng01-305G12
Chromosome4 (Build37)4 (Build37)
Map Location 69,810,448 - 69,810,57168,677,903 - 68,679,023
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064
Downstream geneCdk5rap2, Megf9, LOC100039565
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G12.bB6Ng01-305G12.g
ACCGA098705GA098706
length9831,118
definitionB6Ng01-305G12.b B6Ng01-305G12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,810,448 - 69,810,571)(68,677,903 - 68,679,023)
sequence
gaattctctcagttttttttttaattgcttctaattacagttgcaggttt
tgaattttttttttcatttccttctactacttgttttcatgggagttttt
aagagatttattcatttcctccaattgtttgtttgtattttcctggattt
ctttattctctctttaaagacttctatcattttcatatagttgagtttaa
gatagttttcttctgttttagatatattggtttactcagtgacttctgtg
gtagtataggttagcactagtggaaacatattgccctggttgtgttaggt
tcttttgttatgttggctcctagacatcagggtttggttaattttaagtc
tagttgctaacttctgagtttgtctttgttgggttggtttgttggtcctt
ggtttctgtttcctctctggattttcacagtataagagcttcatgtgtgg
tattttcacagggagtgcctgctggtattgggggctgggatacaatgtca
agtcagtggaaggaagctaggaaaagatgtggctcattgaattcagagga
gaggttggcagggtgagaagaaggccacagttagagattccttgcggtgc
tagagatgagagtgaagaattagatgtagggaaataaagaacatggtgat
attatgcatgcaggcattgtacctgattttctggaagccatggcctgtgg
ttgagttatgctggagttgggtgctgagatcattgataagtagaaagagg
gaggcaagaagagaatggtttgtgggacccacaggagaaatgtacaggag
acaaaagagcctatgactgctgttctattgtagcacaaggaagaagcctg
agtgtaactttaattttttcaaaacctattctttttttttttgtttgttt
tgttttttttccattttttattaggtatttaactcattacatttccaatg
ctataccaaaaagtcccccatattctacccacc

gaattcctagtgttaaaccctttgtggggaagagcactgctttgcttatc
ttagtatgtacggatagttgggagacactggagactgacattgtctcaaa
agggtctatgtcaacttcatgacatctttgtgacatttgagcatctcaaa
ctactttgatgccaatgttaccccatgagctaaagttcccagaaagaagt
tatgatgaatagctgacaggctgattggaagttaataattatagagaagt
tggaatggcgcagatgcagagataagtaatcttgggctatctttaaccct
cttgctagcctttcatttcgtactggtgtctgatctaaagtcattttgac
tatcatgtaaaatctttcgggggaatgttagcatatttctagcccctacc
aactcaaaagctaagaatgccatcacacaacctgtagaatctataattca
aatctccctgctctgctgtaaactgctctttttaatgtacttccaccaat
gcatttttagagggtgctgaactatgacttttcatgttgcaatgaaaagc
ttaatgtataattagaagtggaatatggaattttccataccccaagtctg
tgttttcttgcaatattcactcgtatttgtttgagattgaattatggctt
atttactttgagatgagagctctatttttacatcactctcatctgtacaa
ggaagatattaagcatcatgaactttctaggtctggattcctctaacact
ggattgatgaagtgcagaccaaactatttcttctaatattagttttgaaa
cattttgtaatttattaaatggcataaagcaacatttttataaatctgtc
ctcccacctagaagactggctaggggtaaattagagtaatggataattct
ctacacattttgcttccaatttttacagatgaatttacaaaggagagtaa
aggatatttcttcaaagtttatttgttgctggtgtgtcaccagcagtgcc
tgatcatctgttaaattcttaggtgaatacaaaataggatattcctggag
ttcagaaaagaaagcaagggcatcctgacctcagttcacaacggctaatc
ttagttagtgttggtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_69810448_69810571
seq2: B6Ng01-305G12.b_893_1025

seq1  AGTGTAACTTTAATTTTTTCAAAGCCTA--CTTTCTTTTTT--TTTTTTT  46
      ||||||||||||||||||||||| ||||  |||| ||||||  ||| |||
seq2  AGTGTAACTTTAATTTTTTCAAAACCTATTCTTTTTTTTTTTGTTTGTTT  50

seq1  TTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAAT  96
      | ||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  TGTTTTTTTTCCATTTTTTATTAGGTATTTAACTCA-TTACATTTCCAAT  99

seq1  GCTATACC-AAAAGTCCCCC-----TTACCCACC  124
      |||||||| |||||||||||      ||||||||
seq2  GCTATACCAAAAAGTCCCCCATATTCTACCCACC  133


seq1: chr4_68677903_68679023
seq2: B6Ng01-305G12.g_69_1186

seq1  GAATTCCTAGTGTTAAACCCTTTGTGGGGAAGAGCACTGCTTTGCTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGTGTTAAACCCTTTGTGGGGAAGAGCACTGCTTTGCTTATC  50

seq1  TTAGTATGTACGGATAGTTGGGAGACACTGGAGACTGACATTGTCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATGTACGGATAGTTGGGAGACACTGGAGACTGACATTGTCTCAAA  100

seq1  AGGGTCTATGTCAACTTCATGACATCTTTGTGACATTTGAGCATCTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTATGTCAACTTCATGACATCTTTGTGACATTTGAGCATCTCAAA  150

seq1  CTACTTTGATGCCAATGTTACCCCATGAGCTAAAGTTCCCAGAAAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGATGCCAATGTTACCCCATGAGCTAAAGTTCCCAGAAAGAAGT  200

seq1  TATGATGAATAGCTGACAGGCTGATTGGAAGTTAATAATTATAGAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAATAGCTGACAGGCTGATTGGAAGTTAATAATTATAGAGAAGT  250

seq1  TGGAATGGCGCAGATGCAGAGATAAGTAATCTTGGGCTATCTTTAACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGGCGCAGATGCAGAGATAAGTAATCTTGGGCTATCTTTAACCCT  300

seq1  CTTGCTAGCCTTTCATTTCGTACTGGTGTCTGATCTAAAGTCATTTTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGCCTTTCATTTCGTACTGGTGTCTGATCTAAAGTCATTTTGAC  350

seq1  TATCATGTAAAATCTTTCGGGGGAATGTTAGCATATTTCTAGCCCCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTAAAATCTTTCGGGGGAATGTTAGCATATTTCTAGCCCCTACC  400

seq1  AACTCAAAAGCTAAGAATGCCATCACACAACCTGTAGAATCTATAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAAGCTAAGAATGCCATCACACAACCTGTAGAATCTATAATTCA  450

seq1  AATCTCCCTGCTCTGCTGTAAACTGCTCTTTTTAATGTACTTCCACCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCTGCTCTGCTGTAAACTGCTCTTTTTAATGTACTTCCACCAAT  500

seq1  GCATTTTTAGAGGGTGCTGAACTATGACTTTTCATGTTGCAATGAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTAGAGGGTGCTGAACTATGACTTTTCATGTTGCAATGAAAAGC  550

seq1  TTAATGTATAATTAGAAGTGGAATATGGAATTTTCCATACCCCAAGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTATAATTAGAAGTGGAATATGGAATTTTCCATACCCCAAGTCTG  600

seq1  TGTTTTCTTGCAATATTCACTCGTATTTGTTTGAGATTGAATTATGGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTGCAATATTCACTCGTATTTGTTTGAGATTGAATTATGGCTT  650

seq1  ATTTACTTTGAGATGAGAGCTCTATTTTTACATCACTCTCATCTGTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTGAGATGAGAGCTCTATTTTTACATCACTCTCATCTGTACAA  700

seq1  GGAAGATATTAAGCATCATGAACTTTCTAGGTCTGGATTCCTCTAACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATATTAAGCATCATGAACTTTCTAGGTCTGGATTCCTCTAACACT  750

seq1  GGATTGATGAAGTGCAGACCAAACTATTTCTTCTAATATTAGTTTTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGATGAAGTGCAGACCAAACTATTTCTTCTAATATTAGTTTTGAAA  800

seq1  CATTTTGTAATTTATTAAATGGCATAAAGCAACATTTTTATAAATCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTAATTTATTAAATGGCATAAAGCAACATTTTTATAAATCTGTC  850

seq1  CTCCCACCTAGAAGACTGGCTA-GGGTAAATTAGAGTAATGGATAATTCT  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCCCACCTAGAAGACTGGCTAGGGGTAAATTAGAGTAATGGATAATTCT  900

seq1  CTACACATTTTGCTTCCAATTTTAACAGATGAATTTACAAAGGAGAGTAA  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTACACATTTTGCTTCCAATTTTTACAGATGAATTTACAAAGGAGAGTAA  950

seq1  AGGATATTTCTTCAAAG-TTAATTGTTGCTGGTGTGTCACCAGCAGTGCC  998
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  AGGATATTTCTTCAAAGTTTATTTGTTGCTGGTGTGTCACCAGCAGTGCC  1000

seq1  TGAATCATCTGTTAAAATTCCTTAGGTGAATAC-AAATAGGATATTCCCC  1047
      || |||||||||||||  | ||||||||||||| ||||||||||||  ||
seq2  TG-ATCATCTGTTAAA--TTCTTAGGTGAATACAAAATAGGATATT--CC  1045

seq1  TGGAGTTCAGAAAAGAAAGCCAAAGGGCATCCTGA-CTCAGTCCACAAAG  1096
      ||||||||||||||||||||  ||||||||||||| |||||| ||| || 
seq2  TGGAGTTCAGAAAAGAAAGC--AAGGGCATCCTGACCTCAGTTCAC-AAC  1092

seq1  GGCTAATCTTAGTAAGTGTT-GTAGC  1121
      ||||||||||||| |||||| |||||
seq2  GGCTAATCTTAGTTAGTGTTGGTAGC  1118


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