BAC Information

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BAC

Clone NameB6Ng01-305I03
Chromosome4 (Build37)
Map Location 14,481,418 - 14,482,549
singlet/doubletsinglet
Overlap geneSlc26a7
Upstream geneRunx1t1, LOC625831, LOC433687, LOC100040030, LOC433688
Downstream gene1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305I03.bB6Ng01-305I03.g
ACCGA098781GA098782
length1,1321,202
definitionB6Ng01-305I03.b B6Ng01-305I03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccattacatgataatcactaggtgagacatattataatacttt
tgctatctgtcactagacattatgatgaaagtgaagaaacttggtccaat
tttttattattatttaccaatgactcaaagcccaagatagaaattcaaag
tgaggaggatgcagagatgactcagtggttaaaggcacttattgctcttc
cagaagacccaagtttaagtccaaacaccctcgttggaagcttagaactg
tctataactccaatttcagaggaatacaatgcccttttcaggcctctgca
ggcactgagggtgtatggtgcacagatatacatgcagtcaaaacacctat
gcaaagcaaataaaattttggattaaattaattatgttgttttttggttt
tttgttttgttttgttttgttttttagttttagttttcatcagtatagtt
tttctctgtgtgatacattccaataaggatgaccataagcagagtgtcaa
gaatttttttttaaatacatgtctctgtccagcggtttgaggataattga
ggatattattgagactattcttcccaaagagccaatcatccaagtgtctt
aaagcacttatattattctttatgcctttccccaggagattagaagtatg
tcatgacaatgaagctcccaatccataccagatttctatgtaatgtgcat
tttgagaacatgtgtttgcagtgatacaaatgaccaccccagaatgaaag
gaatgagaccccctccggggttttattgtctgtctggattaaatgagagc
tcgtcaaacaaagcatgtcttacaagatgctccagaagaacatggggggt
gagtgggcaaagactcattaaacaagaactcagagcatgaagaacacaat
agaggagcagctaggcggagttctaatgactgtcatgtggacccacgtct
agagtcacaagcttaatcagcttatgggatacgaatggtacatgaagatg
ctgcaaagctggaagtccgtatagacacaggcttttctataaaattacct
cagtaaggtcctggcatcctaaatacatgttacattctctcgactgtaag
tccagattgtccttatatgctggtaccacacc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagaagaaagtaccaagagctaaagggatctcaacccta
taggtggacacattatgaactaccagtacccctgagctctggactctagc
tgccatatgtatcaaagatgtcttagtcgcatcacttgcaaggagaggcc
catgtactgccaacctcatatgcccgagggtacccgggaatgcaggtcta
agtggggaatgtgctgcatgcgactgtacagcacgtcacggagtggaacg
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14481418_14482549
seq2: B6Ng01-305I03.b_44_1175

seq1  GAATTCACCATTACATGATAATCACTAGGTGAGACATA-GATAATACTTT  49
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  GAATTCACCATTACATGATAATCACTAGGTGAGACATATTATAATACTTT  50

seq1  TGCTATCTGTCACTAGACATTATGATGAAAGTGAAGAAACTTGGTCCAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTGTCACTAGACATTATGATGAAAGTGAAGAAACTTGGTCCAAT  100

seq1  TTTTTATTATTATTTACCAATGACTCAAAGCCCAAGATAGAAATTCAAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATTATTTACCAATGACTCAAAGCCCAAGATAGAAATTCAAAG  150

seq1  TGAGGAGGATGCAGAGATGACTCAGTGGTTAAAGGCACTTATTGCTCTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGATGCAGAGATGACTCAGTGGTTAAAGGCACTTATTGCTCTTC  200

seq1  CAGAAGACCCAAGTTTAAGTCCAAACACCCTCGTTGGAAGCTTAGAACTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACCCAAGTTTAAGTCCAAACACCCTCGTTGGAAGCTTAGAACTG  250

seq1  TCTATAACTCCAATTTCAGAGGAATACAATGCCCTTTTCAGGCCTCTGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAACTCCAATTTCAGAGGAATACAATGCCCTTTTCAGGCCTCTGCA  300

seq1  GGCACTGAGGGTGTATGGTGCACAGATATACATGCAGTCAAAACACCTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGAGGGTGTATGGTGCACAGATATACATGCAGTCAAAACACCTAT  350

seq1  GCAAAGCAAATAAAATTTTGGATTAAATTAATTATGTTGTTTTTTGGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCAAATAAAATTTTGGATTAAATTAATTATGTTGTTTTTTGGTTT  400

seq1  TTTGTTTTGTTTTGTTTTGTTTTTTAGTTTTAGTTTTCATCAGTATAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTGTTTTTTAGTTTTAGTTTTCATCAGTATAGTT  450

seq1  TTTCTCTGTGTGATACATTCCAATAAGGATGACCATAAGCAGAGTGTCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTGTGATACATTCCAATAAGGATGACCATAAGCAGAGTGTCAA  500

seq1  GAATTTTTTTTTAAATACATGTCTCTGTCCAGCGGTTTGAGGATAATTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTTTTTAAATACATGTCTCTGTCCAGCGGTTTGAGGATAATTGA  550

seq1  GGATATTATTGAGACTATTCTTCCCAAAGAGCCAATCATCCAAGTGTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTATTGAGACTATTCTTCCCAAAGAGCCAATCATCCAAGTGTCTT  600

seq1  AAAGCACTTATATTATTCTTTATGCCTTTCCCCAGGAGATTAGAAGTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTATATTATTCTTTATGCCTTTCCCCAGGAGATTAGAAGTATG  650

seq1  TCATGACAATGAAGCTCCCAATCCATACCAGATTTCTATGTAATGTGCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACAATGAAGCTCCCAATCCATACCAGATTTCTATGTAATGTGCAT  700

seq1  TTTGAGAACATGTGTTTGCAGTGATACAAATGACCACCCCAGAATGAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAACATGTGTTTGCAGTGATACAAATGACCACCCCAGAATGAAAG  750

seq1  GAATGAGACCCCCTCCGGGGTTTTATTGTCTGTCTGGATTAAATGAGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGACCCCCTCCGGGGTTTTATTGTCTGTCTGGATTAAATGAGAGC  800

seq1  TCGTCAAACAAAGCATGTCTTACAAGATGCTCCAGAAGAACATGGGGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAAACAAAGCATGTCTTACAAGATGCTCCAGAAGAACATGGGGGGT  850

seq1  GAGTGGGCAAAGACTCATTAAAACAAGAACTCAGAGCATGAAGAACACAA  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGTGGGCAAAGACTCATT-AAACAAGAACTCAGAGCATGAAGAACACAA  899

seq1  TAGAGGAGCAGGCTAGGCGGAGTTCTAATGACTGTCATGTGGACCCACGT  949
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGCA-GCTAGGCGGAGTTCTAATGACTGTCATGTGGACCCACGT  948

seq1  CTAGAAGTCACAAGCTAAATCAGCTTATGGGATACGAATGGTACATGAAG  999
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTAG-AGTCACAAGCTTAATCAGCTTATGGGATACGAATGGTACATGAAG  997

seq1  ATGCTGCAGAGCTGGAGGTCCGTATAGACACAGGCTTTTCTATAAAATCA  1049
      |||||||| ||||||| ||||||||||||||||||||||||||||||| |
seq2  ATGCTGCAAAGCTGGAAGTCCGTATAGACACAGGCTTTTCTATAAAATTA  1047

seq1  -CTCAGTAGAGTTCTGGCATCCTAAATACATGTTACATTTCTCTCGACTG  1098
       |||||||  || |||||||||||||||||||||||| ||||||||||||
seq2  CCTCAGTAAGGTCCTGGCATCCTAAATACATGTTACA-TTCTCTCGACTG  1096

seq1  TAAGTCCAG-TTGTCTCTATATGCTGGTA-CACACC  1132
      ||||||||| |||||  |||||||||||| ||||||
seq2  TAAGTCCAGATTGTCCTTATATGCTGGTACCACACC  1132