BAC Information

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BAC

Clone NameB6Ng01-306F21
Chromosome4 (Build37)
Map Location 74,061,498 - 74,230,536
singlet/doubletdoublet
Overlap geneLOC100040258
Upstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c
Downstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306F21.bB6Ng01-306F21.g
ACCGA099425GA099426
length592494
definitionB6Ng01-306F21.b B6Ng01-306F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,229,941 - 74,230,536)(74,061,498 - 74,061,997)
sequence
aaatagttcatagttcaaagtagtctttcaaagctgctgtttgatagtaa
acttccagttcagactagccgcatgtcaaatgctcaataagccacattta
gctgaactattatctcatcttgctttcatactgcccataacagcaattta
ctctttggtcacgttcatttaaaaaaaaaaatttttaaaagacaaataga
gattaagttacagtttcctatttttagttctcactcaggataaagttatt
ctgctaccttgcaacgccattctcttaagtcttattgtgaaagactccta
gaggagccccttgctcaggcctcaggacaatagtgtacccccaagaactc
acgagagaccaagcttgatgcaaaccacatgagactttatttggggaaag
ccaagctctggggacgactcatatcccatgcaggggtagaggagtcgacc
tcaaggggaaaggggtcccagtttttataggccctcagtggggagaggag
aatgggggagtaggagatttccagattttaaaccatgtgtattctcaaga
aataggtatgggaggggtaccaggaaaagagtctggtgcagg
tttgttcagctctgagccccatcttttaagggggctatttgattttctgg
agtccaccctcttgagttctttatatatattggatattagtcccctatct
gatttaagataggtaaagatcctttctcaatcgacacagttcttttgaag
aacttttgaagaaattgaagaccagggcttgaggccatgctttgatctca
tggtaggagcctgcattaagtagacaatggtgctaatatatatatatata
tatatattaaacctagaatgagctacttgaaggaaagagaagcttccctt
taaaacctggagaacagcttcattaagagtgaaaataaatgagagagcaa
gagatagctgttcttcaagagaaggaaagaaggtcagaggagcctcttca
ggaaacctacatgagtacttttctgagacccaaatcaaatccccagcacg
gatgccagatttctttaagtttatgtgtgtgtgtggggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74229941_74230536
seq2: B6Ng01-306F21.b_43_640 (reverse)

seq1  CCTGCACCAGACTC-TTTCCTTGTACCCCTCCCATACCTATTTCTTGAGA  49
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  CCTGCACCAGACTCTTTTCCTGGTACCCCTCCCATACCTATTTCTTGAGA  50

seq1  ATACACATTGTTT-AAATCTGGAAATCTCCTACTCCCCCATTCTCCTCTC  98
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  ATACACATGGTTTAAAATCTGGAAATCTCCTACTCCCCCATTCTCCTCTC  100

seq1  CCCACTGAGGGCCTATAAAAACTGGGACCCCTTTCCCCTTGAGGTCGACT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGGGCCTATAAAAACTGGGACCCCTTTCCCCTTGAGGTCGACT  150

seq1  CCTCTACCCCTGCATGGGATATGAGTCGTCCCCAGAGCTTGGCTTTCCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCCCTGCATGGGATATGAGTCGTCCCCAGAGCTTGGCTTTCCCC  200

seq1  AAATAAAGTCTCATGTGGTTTGCATCAAGCTTGGTCTCTCGTGAGTTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGTCTCATGTGGTTTGCATCAAGCTTGGTCTCTCGTGAGTTCTT  250

seq1  GGGGGTACACTATTGTCCTGAGGCCTGAGCAAGGGGCTCCTCTAGGAGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTACACTATTGTCCTGAGGCCTGAGCAAGGGGCTCCTCTAGGAGTC  300

seq1  TTTCACAATAAGACTTAAGAGAATGGCGTTGCAAGGTAGCAGAATAACTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAATAAGACTTAAGAGAATGGCGTTGCAAGGTAGCAGAATAACTT  350

seq1  TATCCTGAGTGAGAACTAAAAATAGGAAACTGTAACTTAATCTCTATTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGAGTGAGAACTAAAAATAGGAAACTGTAACTTAATCTCTATTTG  400

seq1  TCTTTTAAAAATTTTTTTTTTTAAATGAACGTGACCAAAGAGTAAATTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAAAATTTTTTTTTTTAAATGAACGTGACCAAAGAGTAAATTGC  450

seq1  TGTTATGGGCAGTATGAAAGCAAGATGAGATAATAGTTCAGCTAAATGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGGCAGTATGAAAGCAAGATGAGATAATAGTTCAGCTAAATGTG  500

seq1  GCTTATTGAGCATTTGACATGCGGCTAGTCTGAACTGGAAGTTTACTATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTGAGCATTTGACATGCGGCTAGTCTGAACTGGAAGTTTACTATC  550

seq1  AAACAGCAGCTTTGAAAGACTACTTTGAACTATGAACTATTTGAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAGCTTTGAAAGACTACTTTGAACTATGAACTATTTGAATTC  598

seq1: chr4_74061498_74061997
seq2: B6Ng01-306F21.g_64_563

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGCTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGCTATTTGATT  50

seq1  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTAAGATAGGTAAAGATCCTTTCTCAATCGACACAGTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAAGATAGGTAAAGATCCTTTCTCAATCGACACAGTTCTT  150

seq1  TTGAAGAACTTTTGAAGAAATTGAAGACCAGGGCTTGAGGCCATGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAACTTTTGAAGAAATTGAAGACCAGGGCTTGAGGCCATGCTTTG  200

seq1  ATCTCATGGTAGGAGCCTGCATTAAGTAGACAATGGTGCTAATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGGTAGGAGCCTGCATTAAGTAGACAATGGTGCTAATATATATA  250

seq1  TATATATATATATTAAACCTAGAATGAGCTACTTGAAGGAAAGAGAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATTAAACCTAGAATGAGCTACTTGAAGGAAAGAGAAGCT  300

seq1  TCCCTTTAAAACCTGGAGAACAGCTTCATTAAGAGTGAAAATAAATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAAAACCTGGAGAACAGCTTCATTAAGAGTGAAAATAAATGAGA  350

seq1  GAGCAAGAGATAGCTGTTCTTCAAGAGAAGGAAAGAAGGTCAGAGGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAGATAGCTGTTCTTCAAGAGAAGGAAAGAAGGTCAGAGGAGCC  400

seq1  TCTTCAGGAAACCTACATGAGTACTTTTCTGAGACCCAAATCAAATCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGAAACCTACATGAGTACTTTTCTGAGACCCAAATCAAATCCCC  450

seq1  AGCACGGATGCCAGATTTCTTTAAGTTTATGTGTGTGTGTGGGGGGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGGATGCCAGATTTCTTTAAGTTTATGTGTGTGTGTGGGGGGGGAG  500