BAC Information

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BAC

Clone NameB6Ng01-306K05
Chromosome11 (Build37)4 (Build37)
Map Location 92,769,347 - 92,769,623132,536,636 - 132,536,784
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC382545
Downstream geneLOC100039286, Car10, LOC629636, Utp18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306K05.bB6Ng01-306K05.g
ACCGA099614GA099615
length27789
definitionB6Ng01-306K05.b B6Ng01-306K05.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,769,347 - 92,769,623)(132,536,636 - 132,536,784)
sequence
tctacttggtctctgctccttctttttctcccatcccattttctcccagg
tttgtggtcccccttgtacccatgaataactgagtcctgctggacgggac
agcttggtattcttgtggaagtcctaacagtgggagtagtggctgtctct
gactcttgcaggctctgggacccttttcctcctactggttgcctagtctg
taggccatttttggttgatgtcacttgggaggcctggtctttcagagaaa
atgtggagggggggctatgggggagaa
caggacagccagggctatacagcgaaaccctgtctttaaaaaagaaagaa
aaaagagagagaaagagaaagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92769347_92769623
seq2: B6Ng01-306K05.b_51_327 (reverse)

seq1  TTCTCCCCCATAGCCCCCCCTCCACATTTTCTCTGAAAGACCAGGCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCCATAGCCCCCCCTCCACATTTTCTCTGAAAGACCAGGCCTCC  50

seq1  CAAGTGACATCAACCAAAAATGGCCTACAGACTAGGCAACCAGTAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACATCAACCAAAAATGGCCTACAGACTAGGCAACCAGTAGGAGG  100

seq1  AAAAGGGTCCCAGAGCCTGCAAGAGTCAGAGACAGCCACTACTCCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTCCCAGAGCCTGCAAGAGTCAGAGACAGCCACTACTCCCACTG  150

seq1  TTAGGACTTCCACAAGAATACCAAGCTGTCCCGTCCAGCAGGACTCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACTTCCACAAGAATACCAAGCTGTCCCGTCCAGCAGGACTCAGTT  200

seq1  ATTCATGGGTACAAGGGGGACCACAAACCTGGGAGAAAATGGGATGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGGGTACAAGGGGGACCACAAACCTGGGAGAAAATGGGATGGGAG  250

seq1  AAAAAGAAGGAGCAGAGACCAAGTAGA  277
      |||||||||||||||||||||||||||
seq2  AAAAAGAAGGAGCAGAGACCAAGTAGA  277

seq1: chr4_132536636_132536784
seq2: B6Ng01-306K05.g_69_157 (reverse)

seq1  CTCTCTCTCTCTCACACACACACATATACACTTTCTCTCTTTCTCTTTCT  50
                                        |||||| ||||| |||
seq2  ----------------------------------CTCTCTCTCTCTCTCT  16

seq1  CTCTTTCTTTCTTCTTCCATTCCTTCTTTCTTTCTTTCTTTTTTTTTTTT  100
      |||||||                     ||||||| ||     | |||||
seq2  CTCTTTC---------------------TCTTTCTCTC-----TCTTTTT  40

seq1  TTTTTTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTG  149
      | ||| ||||||  |||||||||||| |||| |||||||||||||||||
seq2  TCTTTCTTTTTTAAAGACAGGGTTTCGCTGTATAGCCCTGGCTGTCCTG  89