BAC Information

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BAC

Clone NameB6Ng01-307I22
Chromosome4 (Build37)
Map Location 37,890,006 - 38,077,583
singlet/doubletdoublet
Overlap geneLOC277771
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC100039448, LOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307I22.bB6Ng01-307I22.g
ACCGA100297GA100298
length9071,138
definitionB6Ng01-307I22.b B6Ng01-307I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,076,951 - 38,077,583)(37,890,006 - 37,891,177)
sequence
gaattcattttgtttatacttctcttagaaaccctttgtgttccacttga
ttaaaaagaaaaattttgatgtataaagcaattattttctttcagtgcct
tactaacattattctagacaattttagcagctttgctatttaatataata
aaaatgataataatgataaataaaatagacaattattaaaaatttgctgt
cattctaatgagtttgattttatacatgacttggcacttttcgtcttgtc
attttcccatagtaagatgaaggggccacagatggtcatatggtcacata
caatcatcagtacaaataggaatgttaaacacatagggttatctcttgaa
aggaacttgtttttcaatttctacacaaaatgttgggagttagatggtta
atagtattgtaatatttctgctatccatattattgacaaaaactacatgc
gatcctcctcagatactaataacaaaaattttagtcattttatagaaccc
aactctatgaagatgtaatatggactttacaaaactaccagtgtagtcat
aaagtaagctttatagtacacattggtttgagaaaatttacactagggta
cttctttttaagtcatgctgttcttaaatatgtcttttaaaaactgccca
gtgtcagattttttaaatttgaaaaaacattgactgaaaatttatgctca
attagatttcatacatgtttctggaaatcaattctctataagccatgttt
tcagcaactttatagaatattttttcttagttgatctggatttcttttta
catgttttattttatatattttgtttgaatgcatgtatgcatctatatat
ctgtctatcatatatatatatatatatatatatatatatatatatatata
tatatat

gaattctgtgagcatccacttctgtatttgccaggaactggcatagatta
acaagagacagctatatcagggtcctttcagcaaaatcttgctggcatat
gcaatggtgtctgcatttggtggctgattatgggatggacccccaggtgg
gaccgtctctggatggtccatctttcgtcttagctccaagctttgtctct
gtaactccttcaatgggtattttgttccctattctagggaggaatgaagt
atccacgcattgatcttccttcttcatgattttcttgtgttttgcaaatg
gcatcttggatgttctagatactttgttttatattgttgagattctctaa
ttttttctttatgtttatgtatttagtgacttcttattaaacagtatatt
attacattttacacttaacttgaaattctgtatattttctatgagtaatt
attgtagtattaaaccaacattacagtaatgcatttaatcttaacttatt
ccacttatatgctagaagtttccatttagtaatgtatataattgtggttc
tattattattttagaataatgcacatcagtgaagaattaatccatattct
ttaccatatatcttaaacctcatgattcttttatattgcacattttcttt
tgttctattttaaatgttataaaatatgcttttataaataaactttgcta
aagtcattaattttgaatattattcttatcaggttcatttttcttcacag
acgtaagtcaggatacacctgtacatttttctttttcatatcctttcaaa
atgatacagtctctaaaattcaacttctattaaattctatctctgaagta
ttatttctgtagtataatgctatgcatttcatctttgaagtttaattgaa
acaagtgcttaagtttttagactaaaggtctgaatctcagaaaatccttg
ggtagaaatgctcagagatagtgatgatatgcatcactctataatctcta
ctctagagtctatatatgtgaatctcacagtgtttttcagagaaacccag
cttgagtggtgcacaagaatctcatctctatggcactgagactaagtacc
ttcgaatatctcatggatgctaacactgctagtctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38076951_38077583
seq2: B6Ng01-307I22.b_44_676 (reverse)

seq1  ACATATTTAAGAACAGCATGACTTAAAAAGAAGTACCCTAGTGTAAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTAAGAACAGCATGACTTAAAAAGAAGTACCCTAGTGTAAATTT  50

seq1  TCTCAAACCAATGTGTACTATAAAGCTTACTTTATGACTACACTGGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACCAATGTGTACTATAAAGCTTACTTTATGACTACACTGGTAGT  100

seq1  TTTGTAAAGTCCATATTACATCTTCATAGAGTTGGGTTCTATAAAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAAGTCCATATTACATCTTCATAGAGTTGGGTTCTATAAAATGAC  150

seq1  TAAAATTTTTGTTATTAGTATCTGAGGAGGATCGCATGTAGTTTTTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTTGTTATTAGTATCTGAGGAGGATCGCATGTAGTTTTTGTCA  200

seq1  ATAATATGGATAGCAGAAATATTACAATACTATTAACCATCTAACTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGGATAGCAGAAATATTACAATACTATTAACCATCTAACTCCCA  250

seq1  ACATTTTGTGTAGAAATTGAAAAACAAGTTCCTTTCAAGAGATAACCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGTGTAGAAATTGAAAAACAAGTTCCTTTCAAGAGATAACCCTA  300

seq1  TGTGTTTAACATTCCTATTTGTACTGATGATTGTATGTGACCATATGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAACATTCCTATTTGTACTGATGATTGTATGTGACCATATGACC  350

seq1  ATCTGTGGCCCCTTCATCTTACTATGGGAAAATGACAAGACGAAAAGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGGCCCCTTCATCTTACTATGGGAAAATGACAAGACGAAAAGTGC  400

seq1  CAAGTCATGTATAAAATCAAACTCATTAGAATGACAGCAAATTTTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATGTATAAAATCAAACTCATTAGAATGACAGCAAATTTTTAATA  450

seq1  ATTGTCTATTTTATTTATCATTATTATCATTTTTATTATATTAAATAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTATTTTATTTATCATTATTATCATTTTTATTATATTAAATAGCA  500

seq1  AAGCTGCTAAAATTGTCTAGAATAATGTTAGTAAGGCACTGAAAGAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTAAAATTGTCTAGAATAATGTTAGTAAGGCACTGAAAGAAAAT  550

seq1  AATTGCTTTATACATCAAAATTTTTCTTTTTAATCAAGTGGAACACAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTATACATCAAAATTTTTCTTTTTAATCAAGTGGAACACAAAG  600

seq1  GGTTTCTAAGAGAAGTATAAACAAAATGAATTC  633
      |||||||||||||||||||||||||||||||||
seq2  GGTTTCTAAGAGAAGTATAAACAAAATGAATTC  633


seq1: chr4_37890006_37891177
seq2: B6Ng01-307I22.g_68_1205

seq1  GAATTCTGTGAGCATCCACTTCTGTATTTGCCAGGAACTGGCATAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAGCATCCACTTCTGTATTTGCCAGGAACTGGCATAGATTA  50

seq1  ACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATAT  100

seq1  GCAATGGTGTCTGCATTTGGTGGCTGATTATGGGATGGACCCCCAGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTGTCTGCATTTGGTGGCTGATTATGGGATGGACCCCCAGGTGG  150

seq1  GACCGTCTCTGGATGGTCCATCTTTCGTCTTAGCTCCAAGCTTTGTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTCTCTGGATGGTCCATCTTTCGTCTTAGCTCCAAGCTTTGTCTCT  200

seq1  GTAACTCCTTCAATGGGTATTTTGTTCCCTATTCTAGGGAGGAATGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCTTCAATGGGTATTTTGTTCCCTATTCTAGGGAGGAATGAAGT  250

seq1  ATCCACGCATTGATCTTCCTTCTTCATGATTTTCTTGTGTTTTGCAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACGCATTGATCTTCCTTCTTCATGATTTTCTTGTGTTTTGCAAATG  300

seq1  GCATCTTGGATGTTCTAGATACTTTGTTTTATATTGTTGAGATTCTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGGATGTTCTAGATACTTTGTTTTATATTGTTGAGATTCTCTAA  350

seq1  TTTTTTCTTTATGTTTATGTATTTAGTGACTTCTTATTAAACAGTATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTATGTTTATGTATTTAGTGACTTCTTATTAAACAGTATATT  400

seq1  ATTACATTTTACACTTAACTTGAAATTCTGTATATTTTCTATGAGTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTTACACTTAACTTGAAATTCTGTATATTTTCTATGAGTAATT  450

seq1  ATTGTAGTATTAAACCAACATTACAGTAATGCATTTAATCTTAACTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGTATTAAACCAACATTACAGTAATGCATTTAATCTTAACTTATT  500

seq1  CCACTTATATGCTAGAAGTTTCCATTTAGTAATGTATATAATTGTGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTATATGCTAGAAGTTTCCATTTAGTAATGTATATAATTGTGGTTC  550

seq1  TATTATTATTTTAGAATAATGCACATCAGTGAAGAATTAATCCATATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTTAGAATAATGCACATCAGTGAAGAATTAATCCATATTCT  600

seq1  TTACCATATATCTTAAACCTCATGATTCTTTTATATTGCACATTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATATATCTTAAACCTCATGATTCTTTTATATTGCACATTTTCTTT  650

seq1  TGTTCTATTTTAAATGTTATAAAATATGCTTTTATAAATAAACTTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTTTAAATGTTATAAAATATGCTTTTATAAATAAACTTTGCTA  700

seq1  AAGTCATTAATTTTGAATATTATTCTTATCAGGTTCATTTTTCTTCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATTAATTTTGAATATTATTCTTATCAGGTTCATTTTTCTTCACAG  750

seq1  ACGTAAGTCAGGATACACCTGTACATTTTTCTTTTTCATATCC-TTCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACGTAAGTCAGGATACACCTGTACATTTTTCTTTTTCATATCCTTTCAAA  800

seq1  ATGATACAGTCTCTAAAATTCAACTTCTATTAAATTCTATCTCTGAAGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAGTCTCTAAAATTCAACTTCTATTAAATTCTATCTCTGAAGTA  850

seq1  TTATTTCTGTAGTATAATGCTATGCATTTCATCTTTGAAGTTTAATTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGTAGTATAATGCTATGCATTTCATCTTTGAAGTTTAATTGAA  900

seq1  ACAAGTGCTTAAGTTTTTAGACTAAAGGTCTGAAATCTCCAGAAAAATCC  949
      |||||||||||||||||||||||||||||||| ||||| ||| |||||||
seq2  ACAAGTGCTTAAGTTTTTAGACTAAAGGTCTG-AATCT-CAG-AAAATCC  947

seq1  TTGGGTAGAAATGCTCAGAAGAATAGTTGATTGAATAATTGCATCAACTC  999
      |||||||||||||||||||   |||| ||||   |||  |||||| ||||
seq2  TTGGGTAGAAATGCTCAGA--GATAG-TGAT--GATA--TGCATC-ACTC  989

seq1  TATAAATTCCTCTACTCTAGAGTCTATATATGGTGAAAATTCTCACAAGT  1049
      |||||    |||||||||||||||||||||| |||||   |||||| |||
seq2  TATAA---TCTCTACTCTAGAGTCTATATAT-GTGAA---TCTCAC-AGT  1031

seq1  GTTTTTCAGAAGAAAAACACAGGCTTTGAGTTGTTGCACAAAGAATTCTC  1099
      |||||||   ||| |||| |||   ||||| || ||||| ||||| ||| 
seq2  GTTTTTC---AGAGAAACCCAG--CTTGAG-TGGTGCAC-AAGAA-TCT-  1072

seq1  CATCTCTAATGCACTGAGACTGTAAGTACACTTCAAAATAATCTCATGAA  1149
      ||||||||  ||||||||||  ||||||| |||| ||   |||||||| |
seq2  CATCTCTATGGCACTGAGAC--TAAGTAC-CTTCGAA--TATCTCATGGA  1117

seq1  ATTTGCTAACA-TGTTAGTCTAGA  1172
         |||||||| || |||||||||
seq2  ---TGCTAACACTGCTAGTCTAGA  1138


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