BAC Information

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BAC

Clone NameB6Ng01-307J19
Chromosome4 (Build37)
Map Location 148,268,760 - 148,440,174
singlet/doubletdoublet
Overlap geneCasz1, Pex14
Upstream geneMfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755
Downstream geneLOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307J19.bB6Ng01-307J19.g
ACCGA100339GA100340
length264188
definitionB6Ng01-307J19.b B6Ng01-307J19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,439,911 - 148,440,174)(148,268,760 - 148,268,947)
sequence
cagatagattggcagttgctcttctgtgtcccccacattacctcgttgga
ctccgtcaggtcgggggtgttcccctgctgaccaaactgcagctaatcct
ggctgcagacgccctgcggtgtttgttttttacagttcctggatttggtt
taatgtacaattgattttttttaaatgtatttaatcatttttttcttacc
tcataaggattaacctgcacaaacctcattttatcctaagtgtggctttg
ggaggaagggagga
acggtctgctgcacatggagaatatgagtgtctgcaagacggcgaatgta
gctcgggagtctgcccgccatggtgggcagccttctctccagggacctga
aggaggcgggaggagaccatgcacttcccaccccctggcagggagcagct
gcccaggatctcctaccaggcatgggggtgggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_148439911_148440174
seq2: B6Ng01-307J19.b_53_316 (reverse)

seq1  TCCTCCCTTCCTCCCAAAGCCACACTTAGGATAAAATGAGGTTTGTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTTCCTCCCAAAGCCACACTTAGGATAAAATGAGGTTTGTGCAG  50

seq1  GTTAATCCTTATGAGGTAAGAAAAAAATGATTAAATACATTTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCCTTATGAGGTAAGAAAAAAATGATTAAATACATTTAAAAAAAA  100

seq1  TCAATTGTACATTAAACCAAATCCAGGAACTGTAAAAAACAAACACCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGTACATTAAACCAAATCCAGGAACTGTAAAAAACAAACACCGCA  150

seq1  GGGCGTCTGCAGCCAGGATTAGCTGCAGTTTGGTCAGCAGGGGAACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGTCTGCAGCCAGGATTAGCTGCAGTTTGGTCAGCAGGGGAACACCC  200

seq1  CCGACCTGACGGAGTCCAACGAGGTAATGTGGGGGACACAGAAGAGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACCTGACGGAGTCCAACGAGGTAATGTGGGGGACACAGAAGAGCAAC  250

seq1  TGCCAATCTATCTG  264
      ||||||||||||||
seq2  TGCCAATCTATCTG  264

seq1: chr4_148268760_148268947
seq2: B6Ng01-307J19.g_71_258

seq1  ACGGTCTGCTGCACATGGAGAATATGAGTGTCTGCAAGACGGCGAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCTGCTGCACATGGAGAATATGAGTGTCTGCAAGACGGCGAATGTA  50

seq1  GCTCGGGAGTCTGCCCGCCATGGTGGGCAGCCTTCTCTCCAGGGACCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGGAGTCTGCCCGCCATGGTGGGCAGCCTTCTCTCCAGGGACCTGA  100

seq1  AGGAGGCGGGAGGAGACCATGCACTTCCCACCCCCTGGCAGGGAGCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCGGGAGGAGACCATGCACTTCCCACCCCCTGGCAGGGAGCAGCT  150

seq1  GCCCAGGATCTCCTACCAGGCATGGGGGTGGGGGGGTG  188
      ||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGATCTCCTACCAGGCATGGGGGTGGGGGGGTG  188