BAC Information

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BAC

Clone NameB6Ng01-308A10
Chromosome4 (Build37)
Map Location 71,424,087 - 71,554,602
singlet/doubletdoublet
Overlap geneEG667649
Upstream geneLOC100039565, LOC100039979, LOC667638
Downstream geneTle1, Aldoa-ps2, EG384113
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308A10.bB6Ng01-308A10.g
ACCGA100634GA100635
length1,098888
definitionB6Ng01-308A10.b B6Ng01-308A10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,424,087 - 71,425,195)(71,553,716 - 71,554,602)
sequence
gaattcttttttctgggtacaaagaatcaaaactcctataaatctgtaca
gactctgataagaatcacccttatttcccactaccccccccatgtaattc
tcaatcagtttcacagtggatttttccagaggagcaatcatttatcccag
aacttgtccaccatttattgcttagtttcaatggtaaataatccagcttg
gtgtggtagcatatgccagttatattgactcaagatgctaaggaagaaag
atggtgaatttagaagaacagcattcttccaaaattatgcagaaaaagtt
cttccctaagtctacatcatatttctgtgcttcactgatacttaaatact
tgatttctctggaaactcttttgggaggtaaataaaagataaaaatgtat
gtggatgatataaacatctcatagcaattgccttacacgttgagttgctt
gtggagacaatgtcttaaataacaaaacaacagcaacaacaaatcaaaaa
gaatacagctgagtttaaaagttcttaggtagcctctcagcgtcctgggt
tctcctctaacactgaaatgtatacgtggcacccttttactatttatttc
ttttctgtaagagtattagcacatagaaaataggaatattgaaaacataa
tatgcatttctcctgatcattttctctagcccatttaatatgtaacctct
gacactgaactgaaaataataggtggaaagtttttcttttcaacacactc
acaagaaaaagaagtaataaagtagaaaaagacccttgtactttccacac
tcaccaagattttttgaagtttaaacttctctgaggaagtttcatactta
gtggggaaagttaccttgtgtgtgattttcacatataagtgatttctgta
agacatattggtatctttctaaatgataatgaaaatacatattcaagtgc
agcactttccctagagataatttgagacatttgaagtgaatcacttatag
aatgttcactgaatgactgagtcaagaccacagtgttgaattaggaaagc
tgagaagtggggatgagctgacccataagaaagatcagcagtctcaac
gaattctattcaattcaatggaatagaattgaagacccagaaatgaatcc
acacacctatggtcacatgatctttgacaagggagctaaaaccatccagt
ggaaaaaagacagcattttcttttcttttctttttctttctttttttttt
tttgtcaaaaaaaaaaaaaacacacgtcaggtgttcttttattactgtct
tgcctttgtccagcttttcatgacatttctttctttaccacgagagaggg
attaaggataaagaatggcaactgtcgccccaattagagagagaaggcac
ttacaggatgataaaactttggatatctaaaagtatgaagggatatagcc
ataggctgaagtttctgaggccaacaagcagaattcctggaggccctggg
ttagttgtggtgtgtgacccatctgagccagatctatacactgaagtcct
gacttccagggagggagattgaagaggtgggggtctttggatagtattag
gtcttgaggtcagattggtgtctgaaagtgggtctcagacagacagctat
ctgttcccttccgccagtatgtgaagacagaggaaggtgtgccctttact
ccagaaactgagatgtcggttcactgtgtgttctctggtcttgctcttcc
agcttgtagaaatgggatgattctgacaggagcaagccttacagactctg
acattttgttacagcaacctgaatagacttaagcagacttattttcagaa
atcatgatcctgcccttctgggtcttggagagaggaactcttgaatagcc
atagttagttgtgccatgaagtccagtgctgttcttggttaccggtcagc
ctccttagggcctgggaacgtcatcctggttatgtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71424087_71425195
seq2: B6Ng01-308A10.b_45_1142

seq1  GAATTCTTTTTTCTGGGTACAAAGAATCAAAACTCCTATAAATCTGTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCTGGGTACAAAGAATCAAAACTCCTATAAATCTGTACA  50

seq1  GACTCTGATAAGAATCACCCTTATTTCCCACTACCCCCCCCATGTAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGATAAGAATCACCCTTATTTCCCACTACCCCCCCCATGTAATTC  100

seq1  TCAATCAGTTTCACAGTGGATTTTTCCAGAGGAGCAATCATTTATCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAGTTTCACAGTGGATTTTTCCAGAGGAGCAATCATTTATCCCAG  150

seq1  AACTTGTCCACCATTTATTGCTTAGTTTCAATGGTAAATAATCCAGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTCCACCATTTATTGCTTAGTTTCAATGGTAAATAATCCAGCTTG  200

seq1  GTGTGGTAGCATATGCCAGTTATATTGACTCAAGATGCTAAGGAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTAGCATATGCCAGTTATATTGACTCAAGATGCTAAGGAAGAAAG  250

seq1  ATGGTGAATTTAGAAGAACAGCATTCTTCCAAAATTATGCAGAAAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAATTTAGAAGAACAGCATTCTTCCAAAATTATGCAGAAAAAGTT  300

seq1  CTTCCCTAAGTCTACATCATATTTCTGTGCTTCACTGATACTTAAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTAAGTCTACATCATATTTCTGTGCTTCACTGATACTTAAATACT  350

seq1  TGATTTCTCTGGAAACTCTTTTGGGAGGTAAATAAAAGATAAAAATGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTCTGGAAACTCTTTTGGGAGGTAAATAAAAGATAAAAATGTAT  400

seq1  GTGGATGATATAAACATCTCATAGCAATTGCCTTACACGTTGAGTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGATATAAACATCTCATAGCAATTGCCTTACACGTTGAGTTGCTT  450

seq1  GTGGAGACAATGTCTTAAATAACAAAACAACAGCAACAACAAATCAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACAATGTCTTAAATAACAAAACAACAGCAACAACAAATCAAAAA  500

seq1  GAATACAGCTGAGTTTAAAAGTTCTTAGGTAGCCTCTCAGCGTCCTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGCTGAGTTTAAAAGTTCTTAGGTAGCCTCTCAGCGTCCTGGGT  550

seq1  TCTCCTCTAACACTGAAATGTATACGTGGCACCCTTTTACTATTTATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTAACACTGAAATGTATACGTGGCACCCTTTTACTATTTATTTC  600

seq1  TTTTCTGTAAGAGTATTAGCACATAGAAAATAGGAATATTGAAAACATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTAAGAGTATTAGCACATAGAAAATAGGAATATTGAAAACATAA  650

seq1  TATGCATTTCTCCTGATCATTTTCTCTAGCCCATTTAATATGTAACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATTTCTCCTGATCATTTTCTCTAGCCCATTTAATATGTAACCTCT  700

seq1  GACACTGAACTGAAAATAATAGGTGGAAAGTTTTTCTTTTCAACACACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAACTGAAAATAATAGGTGGAAAGTTTTTCTTTTCAACACACTC  750

seq1  ACAAGAAAAAGAAGTAATAAAGTAGAAAAAGACCCTTGTACTTTCCACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAAAGAAGTAATAAAGTAGAAAAAGACCCTTGTACTTTCCACAC  800

seq1  TCACCAAGATTTTTTGAAGTTTAAACTTCTCTGAGGAAGTTTCATACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGATTTTTTGAAGTTTAAACTTCTCTGAGGAAGTTTCATACTTA  850

seq1  GTGGGGAAAGTTACCTTGTGTGTGATTTTCACATATAAGTGATTTCTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAAAGTTACCTTGTGTGTGATTTTCACATATAAGTGATTTCTGTA  900

seq1  AGACATATTGGTATCTTTCTAAATGATAATGAAAATACATATTCAAAGTG  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGACATATTGGTATCTTTCTAAATGATAATGAAAATACATATTC-AAGTG  949

seq1  CAGCACTTTCCCTAGAGATAAATTGAGACATTTGAAGTGAATCACTTATA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  CAGCACTTTCCCTAGAGATAATTTGAGACATTTGAAGTGAATCACTTAT-  998

seq1  AGAATGTTCACTGAAATGACTGAAGTCAAGAACCACAGTGGTTGAATTAG  1050
      ||||||||||||| |||||||| ||||||| |||||||| ||||||||||
seq2  AGAATGTTCACTG-AATGACTG-AGTCAAG-ACCACAGT-GTTGAATTAG  1044

seq1  GGAAAGGCTGGAAGAAGTTGGGGATGAGCTGACCCCATAGAAAGACCAGC  1100
      |  || ||||  ||||| |||||||||||||||||   ||||||| ||||
seq2  G--AAAGCTG--AGAAG-TGGGGATGAGCTGACCCATAAGAAAGATCAGC  1089

seq1  AGTCTCAAC  1109
      |||||||||
seq2  AGTCTCAAC  1098

seq1: chr4_71553716_71554602
seq2: B6Ng01-308A10.g_66_953 (reverse)

seq1  AGCACAATAACCAGGAAGA-GTTCCCAGGCCCT-AGGAGGCTGACCTGGT  48
      ||||| |||||||||| || ||||||||||||| |||||||||||| |||
seq2  AGCAC-ATAACCAGGATGACGTTCCCAGGCCCTAAGGAGGCTGACC-GGT  48

seq1  AACCAAGAACAGCACTGGACTTCATGGCACAACT-ACTATGGCTATTCAA  97
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACCAAGAACAGCACTGGACTTCATGGCACAACTAACTATGGCTATTCAA  98

seq1  GAGTTCCTCCCTCCAAGACCCAGAAGGGCAGGATCATGATTTCTGAAAAT  147
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTCTCTCCAAGACCCAGAAGGGCAGGATCATGATTTCTGAAAAT  148

seq1  AAGTCTGCTTAAGTCTATTCAGGCTGCTGTAACAAAATGTCAGAGTCTGT  197
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTCTGCTTAAGTCTATTCAGGTTGCTGTAACAAAATGTCAGAGTCTGT  198

seq1  AAGGCTTGCTCCTGTCAGAATCATCCCATTTCTACAAGCTGGAAGAGCAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGCTCCTGTCAGAATCATCCCATTTCTACAAGCTGGAAGAGCAA  248

seq1  GACCAGAGAACACACAGTGAACCGACATCTCAGTTTCTGGAGTAAAGGGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAGAACACACAGTGAACCGACATCTCAGTTTCTGGAGTAAAGGGC  298

seq1  ACACCTTCCTCTGTCTTCACATACTGGCGGAAGGGAACAGATAGCTGTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTCCTCTGTCTTCACATACTGGCGGAAGGGAACAGATAGCTGTCT  348

seq1  GTCTGAGACCCACTTTCAGACACCAATCTGACCTCAAGACCTAATACTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGACCCACTTTCAGACACCAATCTGACCTCAAGACCTAATACTAT  398

seq1  CCAAAGACCCCCACCTCTTCAATCTCCCTCCCTGGAAGTCAGGACTTCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACCCCCACCTCTTCAATCTCCCTCCCTGGAAGTCAGGACTTCAG  448

seq1  TGTATAGATCTGGCTCAGATGGGTCACACACCACAACTAACCCAGGGCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGATCTGGCTCAGATGGGTCACACACCACAACTAACCCAGGGCCT  498

seq1  CCAGGAATTCTGCTTGTTGGCCTCAGAAACTTCAGCCTATGGCTATATCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATTCTGCTTGTTGGCCTCAGAAACTTCAGCCTATGGCTATATCC  548

seq1  CTTCATACTTTTAGATATCCAAAGTTTTATCATCCTGTAAGTGCCTTCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATACTTTTAGATATCCAAAGTTTTATCATCCTGTAAGTGCCTTCTC  598

seq1  TCTCTAATTGGGGCGACAGTTGCCATTCTTTATCCTTAATCCCTCTCTCG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATTGGGGCGACAGTTGCCATTCTTTATCCTTAATCCCTCTCTCG  648

seq1  TGGTAAAGAAAGAAATGTCATGAAAAGCTGGACAAAGGCAAGACAGTAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGAAAGAAATGTCATGAAAAGCTGGACAAAGGCAAGACAGTAAT  698

seq1  AAAAGAACACCTGACGTGTGTTTTTTTTTTTTTTGACAAAAAAAAAAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACACCTGACGTGTGTTTTTTTTTTTTTTGACAAAAAAAAAAAAA  748

seq1  GAAAGAAAAAGAAAAGAAAAGAAAATGCTGTCTTTTTTCCACTGGATGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAAGAAAAGAAAAGAAAATGCTGTCTTTTTTCCACTGGATGGT  798

seq1  TTTAGCTCCCTTGTCAAAGATCATGTGACCATAGGTGTGTGGATTCATTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCCTTGTCAAAGATCATGTGACCATAGGTGTGTGGATTCATTT  848

seq1  CTGGGTCTTCAATTCTATTCCATTGAATTGAATAGAATTC  887
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTTCAATTCTATTCCATTGAATTGAATAGAATTC  888