MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-308I11
Chromosome	4 (Build37)
Map Location	152,582,871 - 152,721,428
singlet/doublet	doublet
Overlap gene	LOC100042089
Upstream gene	Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
Downstream gene	Ajap1, BC039966, A430005L14Rik, Dffb, BC046331, Lrrc47, 1190007F08Rik, Ccdc27, Trp73, Wdr8, 1200015A19Rik, Megf6, Arhgef16, Prdm16
Link	Open Mouse BAC browser

Click to get alignment info.

name	Acot7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70025 MGI:1917275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr153 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100129 MGI:1916157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hes3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15207 MGI:104877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Icmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57295 MGI:1888594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf207 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433809 MGI:2684989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19934 MGI:99262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269610 MGI:3036258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnab2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16498 MGI:109239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042028 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Nphp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:260305 MGI:2384210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667039 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	Gm833 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330004 MGI:2685679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Ajap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230959 MGI:2685419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 1 Protein

name	BC039966 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407793 MGI:3039570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	A430005L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97159 MGI:2140680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dffb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13368 MGI:1196287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC046331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230967 MGI:2687282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72946 MGI:1920196
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190007F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68859 MGI:1916109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381580 MGI:2685881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trp73 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22062 MGI:1336991
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59002 MGI:1891749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1200015A19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67808 MGI:1915058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Megf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230971 MGI:1919351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 114 ESTs, 4 Proteins

name	Arhgef16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230972 MGI:2446219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 47 ESTs, 7 Proteins

name	Prdm16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70673 MGI:1917923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acot7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19923051 GeneID:70025 MGI:1917275
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA thioesterase 7 transcript_id : NM_133348.1

name	Gpr153 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130589 GeneID:100129 MGI:1916157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 153 transcript_id : NM_178406.2

name	Hes3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802621 GeneID:15207 MGI:104877
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy and enhancer of split 3 (Drosophila) transcript_id : NM_008237.3

name	Icmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51317396 GeneID:57295 MGI:1888594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : isoprenylcysteine carboxyl methyltransferase transcript_id : NM_133788.1

name	Rnf207 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702020 GeneID:433809 MGI:2684989
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 207 transcript_id : NM_001033489.1

name	Rpl22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543603 GeneID:19934 MGI:99262
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L22 transcript_id : NM_009079.2

name	Chd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487024 GeneID:269610 MGI:3036258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromodomain helicase DNA binding protein 5 transcript_id : NM_001081376.1

name	Kcnab2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543029 GeneID:16498 MGI:109239
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, shaker-related subfamily, beta member 2 transcript_id : NM_010598.2

name	LOC100042028 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253333 GeneID:100042028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042028 transcript_id : XM_001477428.1

name	Nphp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244072 GeneID:260305 MGI:2384210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronophthisis 4 (juvenile) homolog (human) transcript_id : NM_153424.2

name	Gm833 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353827 GeneID:330004 MGI:2685679
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 833, (NCBI) transcript_id : NM_001033414.2

name	Ajap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372801 GeneID:230959 MGI:2685419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 1 Protein product : adherens junction associated protein 1, transcript variant 1 transcript_id : XM_485506.4

name	BC039966 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253335 GeneID:407793 MGI:3039570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : cDNA sequence BC039966 transcript_id : XM_001477621.1

name	A430005L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802941 GeneID:97159 MGI:2140680
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A430005L14 gene transcript_id : NM_175287.3

name	Dffb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802948 GeneID:13368 MGI:1196287
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA fragmentation factor, beta subunit transcript_id : NM_007859.3

name	BC046331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343602 GeneID:230967 MGI:2687282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC046331 transcript_id : NM_177673.2

name	Lrrc47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41152115 GeneID:72946 MGI:1920196
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 47 transcript_id : NM_201226.1

name	Ccdc27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802895 GeneID:381580 MGI:2685881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 27 transcript_id : NM_001033455.2

name	Trp73 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375138 GeneID:22062 MGI:1336991
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformation related protein 73 transcript_id : NM_011642.2

name	Wdr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778725 GeneID:59002 MGI:1891749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 8 transcript_id : NM_021499.2

name	1200015A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71795665 GeneID:67808 MGI:1915058
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200015A19 gene transcript_id : NM_026388.2

name	Megf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372857 GeneID:230971 MGI:1919351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 114 ESTs, 4 Proteins product : multiple EGF-like-domains 6, transcript variant 1 transcript_id : XM_620148.3

name	Arhgef16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372806 GeneID:230972 MGI:2446219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 47 ESTs, 7 Proteins product : Rho guanine nucleotide exchange factor (GEF) 16, transcript variant 5 transcript_id : XM_902459.2

name	Prdm16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107622 GeneID:70673 MGI:1917923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 16 transcript_id : NM_027504.3

name	Acot7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19923052 GeneID:70025 MGI:1917275
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016290 - palmitoyl-CoA hydrolase activity [Evidence IDA] GO_process : GO:0009062 - fatty acid catabolism [Evidence IDA] codon_start : 1 note : acyl-CoA hydrolase; brain acyl-CoA hydrolase; 50-kDa brain acyl-CoA hydrolase product : acyl-CoA thioesterase 7 protein_id : NP_579926.1

name	Gpr153 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859807 CCDS:CCDS18996.1 GeneID:100129 MGI:1916157
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR1 product : G protein-coupled receptor 153 protein_id : NP_848493.1

name	Hes3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61657919 CCDS:CCDS18997.1 GeneID:15207 MGI:104877
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hairy and enhancer of split 3 protein_id : NP_032263.2

name	Icmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51317397 CCDS:CCDS18998.1 GeneID:57295 MGI:1888594
definition	EC_number : 2.1.1.100 GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004671 - protein-S-isoprenylcysteine O-methyltransferase activity [Evidence IMP] GO_process : GO:0006481 - C-terminal protein amino acid methylation [Evidence IEA] [Evidence ISS]; GO:0008104 - protein localization [Evidence IMP] codon_start : 1 note : prenylcysteine carboxyl methyltransferase; prenylated protein carboxyl methyltransferase; protein-S isoprenylcysteine O-methyltransferase product : isoprenylcysteine carboxyl methyltransferase protein_id : NP_598549.1

name	Rnf207 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702021 GeneID:433809 MGI:2684989
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : ring finger protein 207 protein_id : NP_001028661.1

name	Rpl22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677775 CCDS:CCDS18999.1 GeneID:19934 MGI:99262
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L22 protein_id : NP_033105.1

name	Chd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487025 GeneID:269610 MGI:3036258
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : chromodomain helicase DNA binding protein 5 protein_id : NP_001074845.1

name	Kcnab2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543030 CCDS:CCDS19000.1 GeneID:16498 MGI:109239
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : potassium voltage gated channel, shaker related subfamily, beta member 2 product : potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein_id : NP_034728.2

name	LOC100042028 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253334 GeneID:100042028
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477478.1

name	Nphp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244073 GeneID:260305 MGI:2384210
definition	GO_component : GO:0016020 - membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence ISS] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0016337 - cell-cell adhesion [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007632 - visual behavior [Evidence ISS] codon_start : 1 note : nephroretinin product : nephrocystin 4 protein_id : NP_700473.2

name	Gm833 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701915 GeneID:330004 MGI:2685679
definition	codon_start : 1 product : hypothetical protein LOC330004 protein_id : NP_001028586.1

name	Ajap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82895973 GeneID:230959 MGI:2685419
definition	codon_start : 1 product : adherens junction associated protein 1 isoform 1 protein_id : XP_485506.3

name	BC039966 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253336 GeneID:407793 MGI:3039570
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477671.1

name	A430005L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424952 CCDS:CCDS19003.1 GeneID:97159 MGI:2140680
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC97159 protein_id : NP_780496.1

name	Dffb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542553 CCDS:CCDS19004.1 GeneID:13368 MGI:1196287
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IDA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006309 - DNA fragmentation during apoptosis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : DNase inhibited by DNA fragmentation factor; DNA fragmentation factor, 40 kD, beta subunit; caspase-activated DNase product : DNA fragmentation factor, beta subunit protein_id : NP_031885.2

name	BC046331 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244100 CCDS:CCDS19005.1 GeneID:230967 MGI:2687282
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016595 - glutamate binding [Evidence ISS]; GO:0016594 - glycine binding [Evidence ISS]; GO:0016596 - thienylcyclohexylpiperidine binding [Evidence ISS] codon_start : 1 note : likely ortholog of H. sapiens glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein product : glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein protein_id : NP_808341.1

name	Lrrc47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41152116 CCDS:CCDS19006.1 GeneID:72946 MGI:1920196
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : novel protein containing Leucine Rich Repeat domains product : leucine rich repeat containing 47 protein_id : NP_957678.1

name	Ccdc27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701967 CCDS:CCDS19008.1 GeneID:381580 MGI:2685881
definition	codon_start : 1 product : coiled-coil domain containing 27 protein_id : NP_001028627.1

name	Trp73 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794514 CCDS:CCDS19009.1 GeneID:22062 MGI:1336991
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence TAS]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence TAS]; GO:0030900 - forebrain development [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0042981 - regulation of apoptosis [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : transformation related protein 73 protein_id : NP_035772.1

name	Wdr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778726 CCDS:CCDS19010.1 GeneID:59002 MGI:1891749
definition	codon_start : 1 product : WD repeat domain 8 protein_id : NP_067474.2

name	1200015A19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312776 CCDS:CCDS19011.1 GeneID:67808 MGI:1915058
definition	GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC67808 protein_id : NP_080664.1

name	Megf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82895993 GeneID:230971 MGI:1919351
definition	codon_start : 1 product : EGF-like-domain, multiple 3 isoform 1 protein_id : XP_620148.2

name	Arhgef16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94372807 GeneID:230972 MGI:2446219
definition	codon_start : 1 product : hypothetical protein isoform 5 protein_id : XP_907552.2

name	Prdm16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107623 GeneID:70673 MGI:1917923
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : transcription factor MEL1 protein_id : NP_081780.3

name	LOC667039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667039
definition	number : 1 pseudo : _no_value

name	LOC100042089 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042089
definition	number : 1 pseudo : _no_value

name	LOC100042089 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042089
definition	number : 2 pseudo : _no_value

name	1190007F08Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253303 GeneID:68859 MGI:1916109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190007F08 gene transcript_id : XR_035126.1

clone name	MSMg01-429I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-086D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-308I11.b	B6Ng01-308I11.g
ACC	GA101006	GA101007
length	1,114	1,076
definition	B6Ng01-308I11.b	B6Ng01-308I11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(152,720,320 - 152,721,428)	(152,582,871 - 152,583,951)
sequence	gaattctgaggagacaccttgtctaactcctgagcattcaaagaagacca gatctgtgatctgtcaacagggtccaactgctgttggttagaggtcattg tccggaataccaagaacaggctccaggtgtacaactggatgcacaagtaa gcaaacctccgcaagagcaaagctcacggaacccaaggaagagagaagag ctcagccacgcagtctagaggtgactagagccccaaattaccaatcatga gaagacaggcaacatgagcaactggcagacaaatgtacatgattataaac agagctgaggactcagagtcaaggcagtgaaaaagaaaagatcatcaaca ccgttatagtgcacatagtcatagacttagagaagagttctctacctgtg gggagtgacctctttgggaactcaaatggccctttcacaggggtcaccca agaccatcagaaaacacagatatttacattacaattcaaaacagtagcaa aattacaggcatggagtagcaacgaaaataattttatgattgggggtcac cacaacatgaggagctgtactgaagagtctcagcattagaaaggttgtga accatagacctcagggagaatgtggaaatagtaaataaaataggagaccc ccatactcactcggtgaaactcacagactgtcttgaagccaagtgaaacc tccggaaaatgagcagattaaatacaaaagacaaatgggtcagcgggttc ggagacacacaaagacaaactgcccaatgcggggctgtaagcagcatagc actttagaggtctgcagggcacactcgctagtgtgacctgcctgcaattt aaagagccaaacagactcataaaggccaagacatgtatttaagcaataga tataatgtccacaatttgataaaactctggtgtgtgattctaagaagctt aataagtaccatcaggcaaacacaggaaaccacatgagacagatcactgt ccagcacccggaacgctggaaagaaagacataagaggaattagatggaaa atagttttcattacaggaaaaacacaactagaacttctataaatgttctc ctttaaactctcac	gaattcagggcagtatggagcgtggggccgaggtaaccagtcctgaccca caacgggaggagagcctgtattcaattccccttgtgctggggccaaagtt taaaggcaagctctagctatgtaatccttggtctctctggagtcttaaaa ataggccatggacaacacccagcagtatctggaggaggcgctcacagcca ccagaaagtgcagggtgggtgacagagggggacccctgcactgaccagga catcctgtcttcattctgagaacaaagggcctccagagctaagatctccc tgccctccttcctcacttcctgccagagtctcattccaccctcctgtgcc ccgagacaccacagtgccaggcattgtcaagctgatcttggaaggagact attcagatcctgctggggacaaagatgtcctggggcccagctgtgtggac tcttccctggcctctgggaagaggtgagacaaagagaagccagcagggct gaggtctccctgtccactgtctaaggtcacttaaaaaaaaatgtccgtaa ttatacaacaccacacacacaggctcatgcacacgctcaggctcacgcac acgaacacgcaaacgatcgtgcaagcgtgagggagagggaactgtgaaag aaacagagtcgaaggcaagtggagagcagctttccccatggcagacccat ccacccgacagcagaagctggcccatgagtgccaagcgactggcttgcct cttcacatggaaatggaagaaactgatctagagatgatgctcagactctg gttccttgatccaattctaattagaaagctgaccctggtttcggagatgc ctgccactcagacttgagctcctcacagtgatttctcatgcagtgagcgg caccctgcttgcatgggctgtgagatcccagaaggcctgatgaatccagg ttcctctctcccccatgctgtagggtcatccctgctgcctgagaaatctg tacagtggtgtgtgctagctggttgttgtcaacttgacacaaagctgagt atcacaagagattgagcctcccttga
quality values	Open. Hide. 38 14 16 18 58 45 28 28 62 49 46 43 43 31 22 39 47 62 62 62 62 62 62 62 62 62 62 62 62 62 22 31 16 12 19 13 24 34 26 21 34 34 38 43 41 45 59 46 59 59 62 59 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 41 41 48 48 56 28 38 49 43 43 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 44 43 49 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 58 58 49 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 42 58 58 58 54 58 58 58 54 58 58 58 58 58 58 54 58 54 54 58 54 58 58 58 58 46 58 58 58 39 58 54 54 58 58 58 58 54 58 58 58 58 58 58 58 54 58 54 54 54 58 54 58 51 58 58 54 48 58 58 51 47 49 29 58 58 49 58 58 44 38 54 49 51 54 52 54 37 58 54 58 50 37 58 58 45 33 58 50 40 58 39 58 58 58 58 40 49 51 49 47 46 58 58 49 40 58 58 46 48 40 46 58 53 53 51 32 44 44 49 49 50 53 46 53 53 53 50 46 49 54 41 38 29 51 47 58 58 40 58 50 52 52 52 49 51 32 52 58 31 51 52 49 51 47 51 32 49 49 13 51 32 52 52 41 58 40 40 51 52 32 50 29 54 54 33 49 39 42 53 51 37 53 52 40 33 31 54 39 54 51 53 52 52 28 54 54 53 43 49 31 29 51 50 45 54 54 54 42 33 33 32 52 38 54 54 32 35 37 32 54 34 20 33 34 26 38 39 39 32 46 51 45 42 40 27 54 31 37 52 40 32 32 40 28 40 25 41 53 31 52 49 40 32 36 53 28 31 34 29 34 40 40 45 31 40 32 28 53 31 32 33 52 39 32 26 27 14 46 31 31 31 42 31 31 33 51 51 33 26 31 34 31 42 35 29 43 30 28 19 25 38 31 42 27 21 30 31 45 31 31 31 41 34 18 21 42 48 31 32 47 29 30 42 31 30 31 28 46 31 38 29 31 32 31 42 33 22 42 31 46 31 38 46 21 22 10 25 32 37 24 30 35 43 28 31 34 48 41 27 32 27 41 22 25 31 30 31 36 32 32 29 33 16 27 39 31 26 33 23 20 14 30 20 47 31 31 28 22 27 44 44 33 32 35 32 31 30 33 20 38 31 32 31 32 12 7 30 34 38 22 30 23 29 34 29 19 32 36 15 25 24 16 22 30 21 27 32 34 9 32 32 8 4 8 4 6 39 22 31 13 31 22 25 24 26 31 20 16 19 18 30 9 31 7 18 4 12 18 7 19 30 24 23 22 27 24 28 11 8 13 24 21 28 10 13 27 25 7 7 23 11 20 16 28 13 15 16 15 40 20 25 23 47 7 11 18 8 6 20 7 11 5 3 4 6 11 21 11 21 20 13 8 15 9 6 27 40 34 13 14 17 7 4 32 28 7 6 6 6 17 12 9 4 3 4 15 30 23 28 7 10 6 11 7 11 6 15 8 1 5 12 12 21 18 16 9 8 11 5 29 14 5 9 4 8 10 12 8 6 9 11 2 3 4 18 5 7 4 9 10 8 19	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr4_152720320_152721428
seq2: B6Ng01-308I11.b_47_1160 (reverse)

seq1  --GTGAGTTTTAAAGAG-ACATTTATAGAAGTCTTAGTTGTG-TTTTCCT  46
        | |||||| || ||| ||||||||||||||  |||||||| |||||||
seq2  GTGAGAGTTTAAAGGAGAACATTTATAGAAGTTCTAGTTGTGTTTTTCCT  50

seq1  GT-ATGAAAACTATTTT-CATCTAATTCTCTTTATGTCTTTCTTTCCAGC  94
      || |||||||||||||| ||||||||||   |||||||||||||||||||
seq2  GTAATGAAAACTATTTTCCATCTAATTCCTCTTATGTCTTTCTTTCCAGC  100

seq1  GTT-CGGGTGCTGGACAGTGATCTGTCTTCATGTGGTTTCCTGTGTTTGC  143
      ||| ||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  GTTCCGGGTGCTGGACAGTGATCTGTC-TCATGTGGTTTCCTGTGTTTG-  148

seq1  CCTGATGGTACTTATTAAGCTTCTTAGAATCACACACCAGAGTTTTATCA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGTACTTATTAAGCTTCTTAGAATCACACACCAGAGTTTTATCA  198

seq1  AATTGTGGACATTATATCTATTGCTTAAATACATGTCTTGGCCTTTATGA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGGACATTATATCTATTGCTTAAATACATGTCTTGGCCTTTATGA  248

seq1  GTCTGTTTGGCTCTTTAAATTGCAGGCAGGTCACACTAGCGAGTGTGCCC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTGGCTCTTTAAATTGCAGGCAGGTCACACTAGCGAGTGTGCCC  298

seq1  TGCAGACCTCTAAAGTGCTATGCTGCTTACAGCCCCGCATTGGGCAGTTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACCTCTAAAGTGCTATGCTGCTTACAGCCCCGCATTGGGCAGTTT  348

seq1  GTCTTTGTGTGTCTCCGAACCCGCTGACCCATTTGTCTTTTGTATTTAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTGTGTCTCCGAACCCGCTGACCCATTTGTCTTTTGTATTTAAT  398

seq1  CTGCTCATTTTCCGGAGGTTTCACTTGGCTTCAAGACAGTCTGTGAGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATTTTCCGGAGGTTTCACTTGGCTTCAAGACAGTCTGTGAGTTT  448

seq1  CACCGAGTGAGTATGGGGGTCTCCTATTTTATTTACTATTTCCACATTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAGTGAGTATGGGGGTCTCCTATTTTATTTACTATTTCCACATTCT  498

seq1  CCCTGAGGTCTATGGTTCACAACCTTTCTAATGCTGAGACTCTTCAGTAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGGTCTATGGTTCACAACCTTTCTAATGCTGAGACTCTTCAGTAC  548

seq1  AGCTCCTCATGTTGTGGTGACCCCCAATCATAAAATTATTTTCGTTGCTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCATGTTGTGGTGACCCCCAATCATAAAATTATTTTCGTTGCTA  598

seq1  CTCCATGCCTGTAATTTTGCTACTGTTTTGAATTGTAATGTAAATATCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGCCTGTAATTTTGCTACTGTTTTGAATTGTAATGTAAATATCTG  648

seq1  TGTTTTCTGATGGTCTTGGGTGACCCCTGTGAAAGGGCCATTTGAGTTCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGATGGTCTTGGGTGACCCCTGTGAAAGGGCCATTTGAGTTCC  698

seq1  CAAAGAGGTCACTCCCCACAGGTAGAGAACTCTTCTCTAAGTCTATGACT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGTCACTCCCCACAGGTAGAGAACTCTTCTCTAAGTCTATGACT  748

seq1  ATGTGCACTATAACGGTGTTGATGATCTTTTCTTTTTCACTGCCTTGACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACTATAACGGTGTTGATGATCTTTTCTTTTTCACTGCCTTGACT  798

seq1  CTGAGTCCTCAGCTCTGTTTATAATCATGTACATTTGTCTGCCAGTTGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCTCAGCTCTGTTTATAATCATGTACATTTGTCTGCCAGTTGCT  848

seq1  CATGTTGCCTGTCTTCTCATGATTGGTAATTTGGGGCTCTAGTCACCTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCCTGTCTTCTCATGATTGGTAATTTGGGGCTCTAGTCACCTCT  898

seq1  AGACTGCGTGGCTGAGCTCTTCTCTCTTCCTTGGGTTCCGTGAGCTTTGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCGTGGCTGAGCTCTTCTCTCTTCCTTGGGTTCCGTGAGCTTTGC  948

seq1  TCTTGCGGAGGTTTGCTTACTTGTGCATCCAGTTGTACACCTGGAGCCTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCGGAGGTTTGCTTACTTGTGCATCCAGTTGTACACCTGGAGCCTG  998

seq1  TTCTTGGTATTCCGGACAATGACCTCTAACCAACAGCAGTTGGACCCTGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTATTCCGGACAATGACCTCTAACCAACAGCAGTTGGACCCTGT  1048

seq1  TGACAGATCACAGATCTGGTCTTCTTTGAATGCTCAGGAGTTAGACAAGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATCACAGATCTGGTCTTCTTTGAATGCTCAGGAGTTAGACAAGG  1098

seq1  TGTCTCCTCAGAATTC  1109
      ||||||||||||||||
seq2  TGTCTCCTCAGAATTC  1114

seq1: chr4_152582871_152583951
seq2: B6Ng01-308I11.g_67_1142

seq1  GAATTCAGGGCAGTATGGAGCGTGGGGCCGAGGTAACCAGTCCTGACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCAGTATGGAGCGTGGGGCCGAGGTAACCAGTCCTGACCCA  50

seq1  CAACGGGAGGAGAGCCTGTATTCAATTCCCCTTGTGCTGGGGCCAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGGGAGGAGAGCCTGTATTCAATTCCCCTTGTGCTGGGGCCAAAGTT  100

seq1  TAAAGGCAAGCTCTAGCTATGTAATCCTTGGTCTCTCTGGAGTCTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAAGCTCTAGCTATGTAATCCTTGGTCTCTCTGGAGTCTTAAAA  150

seq1  ATAGGCCATGGACAACACCCAGCAGTATCTGGAGGAGGCGCTCACAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCATGGACAACACCCAGCAGTATCTGGAGGAGGCGCTCACAGCCA  200

seq1  CCAGAAAGTGCAGGGTGGGTGACAGAGGGGGACCCCTGCACTGACCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGTGCAGGGTGGGTGACAGAGGGGGACCCCTGCACTGACCAGGA  250

seq1  CATCCTGTCTTCATTCTGAGAACAAAGGGCCTCCAGAGCTAAGATCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGTCTTCATTCTGAGAACAAAGGGCCTCCAGAGCTAAGATCTCCC  300

seq1  TGCCCTCCTTCCTCACTTCCTGCCAGAGTCTCATTCCACCCTCCTGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCTTCCTCACTTCCTGCCAGAGTCTCATTCCACCCTCCTGTGCC  350

seq1  CCGAGACACCACAGTGCCAGGCATTGTCAAGCTGATCTTGGAAGGAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGACACCACAGTGCCAGGCATTGTCAAGCTGATCTTGGAAGGAGACT  400

seq1  ATTCAGATCCTGCTGGGGACAAAGATGTCCTGGGGCCCAGCTGTGTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATCCTGCTGGGGACAAAGATGTCCTGGGGCCCAGCTGTGTGGAC  450

seq1  TCTTCCCTGGCCTCTGGGAAGAGGTGAGACAAAGAGAAGCCAGCAGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTGGCCTCTGGGAAGAGGTGAGACAAAGAGAAGCCAGCAGGGCT  500

seq1  GAGGTCTCCCTGTCCACTGTCTAAGGTCACTTAAAAAAAAATGTCCGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCCCTGTCCACTGTCTAAGGTCACTTAAAAAAAAATGTCCGTAA  550

seq1  TTATACAACACCACACACACAGGCTCATGCACACGCTCAGGCTCACGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAACACCACACACACAGGCTCATGCACACGCTCAGGCTCACGCAC  600

seq1  ACGAACACGCAAACGATCGTGCAAGCGTGAGGGAGAGGGAACTGTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACACGCAAACGATCGTGCAAGCGTGAGGGAGAGGGAACTGTGAAAG  650

seq1  AAACAGAGTCGAAGGCAAGTGGAGAGCAGCTTTCCCCATGGCAGACCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGTCGAAGGCAAGTGGAGAGCAGCTTTCCCCATGGCAGACCCAT  700

seq1  CCACCCGACAGCAGAAGCTGGCCCATGAGTGCCAAGCGACTGGCTTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCGACAGCAGAAGCTGGCCCATGAGTGCCAAGCGACTGGCTTGCCT  750

seq1  CTTCACATGGAAATGGAAGAAACTGATCTAGAGATGATGCTCAGACTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATGGAAATGGAAGAAACTGATCTAGAGATGATGCTCAGACTCTG  800

seq1  GTTCCTTGATCCAATTCTAATTAGAAAGCTGACCCTGG-TTCGGAGATGC  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTCCTTGATCCAATTCTAATTAGAAAGCTGACCCTGGTTTCGGAGATGC  850

seq1  CTGCCACTCAGACTTGAGCTCCTCACAGTGATTTCTCATGCAGTGAGCGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACTCAGACTTGAGCTCCTCACAGTGATTTCTCATGCAGTGAGCGG  900

seq1  CACCCTGCTTGCATGGGCTGTGAGATCCCAGAAGGCCCTGATGAATCCAG  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACCCTGCTTGCATGGGCTGTGAGATCCCAGAAGG-CCTGATGAATCCAG  949

seq1  G-TCCTCCCTCCCCCATGCTGTAGGGGTCATCCCTGCTGCCTGGAGAAAT  998
      | ||||| ||||||||||||||| |||||||||||||||||| |||||||
seq2  GTTCCTCTCTCCCCCATGCTGTA-GGGTCATCCCTGCTGCCT-GAGAAAT  997

seq1  CTGTACAGTGGTGTGTGCTAGCTGGTTTTGTTTGTCAACTTGACAC-AAG  1047
      |||||||||||||||||||||||||||    ||||||||||||||| |||
seq2  CTGTACAGTGGTGTGTGCTAGCTGGTT---GTTGTCAACTTGACACAAAG  1044

seq1  CTGGAGTTATCACAGAGA-AAGGAGCCTCCCTTGA  1081
      || ||| ||||||| ||| |  |||||||||||||
seq2  CT-GAG-TATCACA-AGAGATTGAGCCTCCCTTGA  1076

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information