BAC Information

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BAC

Clone NameB6Ng01-308P20
Chromosome4 (Build37)
Map Location 145,591,985 - 145,593,075
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084
Downstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308P20.bB6Ng01-308P20.g
ACCGA101340GA101341
length1,0881,091
definitionB6Ng01-308P20.b B6Ng01-308P20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcggactcagaaattcccctgcc
tctgcctcccaagtgctgggattgaaggcgtgggccactactcccagcgg
tgataatgtcttttctccatcacatgtttattagtgcgtgaagtgttcag
aggattggcacaccatcacagagcatagattactattgcatccatacacc
tttgacatctctggcctatggagaccctttgagaatggatcttgcctata
tgcatctatgtttccctgccttcagaggtctgatacttgggatttttgtg
aatcacccagcaccttccatctggaaagccagtaggcaccctctcatcta
cattctgcccatttctctcatcttctctttccttggcttcatgatattca
caggccattcacactcagacatttttatcgtgaggcaaaccatgttcata
ggtgcatagactgattttttttccctaaacttttggccaagtagatcttg
gttctggatttcagagtggtttcggttattttgttgttgttgtgtttgtt
ttgagacagggtttctctttatagccttggctgtcttggaccttactttg
tagaccaggctggcctcaaactcagaaatccacctgcctctgcctcctga
gtgctgggattaaaaggcataaaccagcatccctggctcagagtgttctt
ttactgaaatttattcacagcatgaacatcatcattaatagttcatgtgt
aggcattaatagttgtatctcacaaattatagtctcaaatttctggtctt
ttctgcatttttctgcgaaacattttgctgccttctggtaaagtatattc
tctataggtcattataaatgaaaagcatcaaaaagctaaaatttcaaaag
aagaaattttgtgctcaaaactgagtttattagtcagaatgaaagactat
gattgatgtttactggttaggtaaatataagtatgggggtctctgcaaat
actaggttctgtagattaacaatccatgagactaaagaatctagtttcaa
tacactctataaatattctacactggctgtgggtgttt
gaattctctgatgaatactaagattggattgtttggtaaagcatttgtca
cattcactgcatttgtaaggtttctctcctgtatgaattctctgatgaat
tctcagactgcttttttcagtaaagcatttgtcacattcactgcatttgt
aaggtttctctcctgtatgaattctctgatgaatactaagacaggattgt
tgggtaaagcatttgtcacattcactgcatttgtaaggtttctctcctgt
atgaattctctgatgaatactaagattggattgtttggtaaaacatttgt
cacattcactgcatttgtaaggtttctctcctgtatgaattctctgatgc
atagtaagattgaatttgtttttaaaacatttgtcacattcactacattt
gtaaattttctcttctgtatgaatttcctgatgaatactaagatggatct
gatgggtaaagcatttgtcacttttactactttcgtaaggtttctttcca
tgataaattctctgctgactttgtagtttttctctgtgggtaagatattt
gtgaaattcactacatttgtaagggttccctgcaatattgtcttttttca
ccatgactttatgtttagaaacaaaaaccttctctaattctgcatttcgg
ttgtgttttttcttctgcatgttaattccttgattgagactaatggtaga
aaacaaacttaaactgtttacagagtcattgtatttgcaaacttttttag
tgttcctgggcttaagtcttttttggttcgagaattgaagagcatcagag
ctgtgattagttttgtaaggtgtacactggagggattcaagaatgacatt
gctaagcttgtcccatttagaagacttcttcttgaatatttcatgtgttc
atggacaatgtactggctgtcttgatccaatacctttcccattctttcac
ataatgcattgatttttctgaaaaaaaaggggggggggggccatttagag
gtgacatgaattacttattataagagttaggactcataattcagttgagc
ttatggattcgttactccttcagaaaggtctctctcttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145591985_145593075
seq2: B6Ng01-308P20.b_51_1138 (reverse)

seq1  AAACACCCACAACCAGTGTAGAAATATTTATAGAGTGGTATTG-AACTAG  49
      ||||||||||| ||||||||| |||||||||||||| |||||| ||||||
seq2  AAACACCCACAGCCAGTGTAG-AATATTTATAGAGT-GTATTGAAACTAG  48

seq1  ATTTCTTTTGGTCTCATGGATTGTTAATCTACCAGACCTAGTATTTGCAG  99
      |||   ||| ||||||||||||||||||||||   |||||||||||||||
seq2  ATT--CTTTAGTCTCATGGATTGTTAATCTACAGAACCTAGTATTTGCAG  96

seq1  AGACCCCCATACTTATA-TTACCTAACCAGTAAACATCAATCATAGTCTT  148
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGACCCCCATACTTATATTTACCTAACCAGTAAACATCAATCATAGTCTT  146

seq1  TCATTCTGACTAATAAACTCAGTTTTGAGCACAAAATTTCTTCTTTTTGA  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCATTCTGACTAATAAACTCAGTTTTGAGCACAAAATTTCTTC-TTTTGA  195

seq1  AATTTTAGCTTTTTGATGCTTTTCATTTATAATGACCTATAGAGAATATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGCTTTTTGATGCTTTTCATTTATAATGACCTATAGAGAATATA  245

seq1  CTTTACCAGAAGGCAGCAAAATGTTTCGCAGAAAAATGCAGAAAAGACCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCAGAAGGCAGCAAAATGTTTCGCAGAAAAATGCAGAAAAGACCA  295

seq1  GAAATTTGAGACTATAATTTGTGAGATACAACTATTAATGCCTACACATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGAGACTATAATTTGTGAGATACAACTATTAATGCCTACACATG  345

seq1  AACTATTAATGATGATGTTCATGCTGTGAATAAATTTCAGTAAAAGAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTAATGATGATGTTCATGCTGTGAATAAATTTCAGTAAAAGAACA  395

seq1  CTCTGAGCCAGGGATGCTGGTTTATGCCTTTTAATCCCAGCACTCAGGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCCAGGGATGCTGGTTTATGCCTTTTAATCCCAGCACTCAGGAG  445

seq1  GCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTA  495

seq1  AGGTCCAAGACAGCCAAGGCTATAAAGAGAAACCCTGTCTCAAAACAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAAGACAGCCAAGGCTATAAAGAGAAACCCTGTCTCAAAACAAAC  545

seq1  ACAACAACAACAAAATAACCGAAACCACTCTGAAATCCAGAACCAAGATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAAAATAACCGAAACCACTCTGAAATCCAGAACCAAGATC  595

seq1  TACTTGGCCAAAAGTTTAGGGAAAAAAAATCAGTCTATGCACCTATGAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGCCAAAAGTTTAGGGAAAAAAAATCAGTCTATGCACCTATGAAC  645

seq1  ATGGTTTGCCTCACGATAAAAATGTCTGAGTGTGAATGGCCTGTGAATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGCCTCACGATAAAAATGTCTGAGTGTGAATGGCCTGTGAATAT  695

seq1  CATGAAGCCAAGGAAAGAGAAGATGAGAGAAATGGGCAGAATGTAGATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGCCAAGGAAAGAGAAGATGAGAGAAATGGGCAGAATGTAGATGA  745

seq1  GAGGGTGCCTACTGGCTTTCCAGATGGAAGGTGCTGGGTGATTCACAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGCCTACTGGCTTTCCAGATGGAAGGTGCTGGGTGATTCACAAAA  795

seq1  ATCCCAAGTATCAGACCTCTGAAGGCAGGGAAACATAGATGCATATAGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAGTATCAGACCTCTGAAGGCAGGGAAACATAGATGCATATAGGC  845

seq1  AAGATCCATTCTCAAAGGGTCTCCATAGGCCAGAGATGTCAAAGGTGTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCATTCTCAAAGGGTCTCCATAGGCCAGAGATGTCAAAGGTGTAT  895

seq1  GGATGCAATAGTAATCTATGCTCTGTGATGGTGTGCCAATCCTCTGAACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAATAGTAATCTATGCTCTGTGATGGTGTGCCAATCCTCTGAACA  945

seq1  CTTCACGCACTAATAAACATGTGATGGAGAAAAGACATTATCACCGCTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGCACTAATAAACATGTGATGGAGAAAAGACATTATCACCGCTGG  995

seq1  GAGTAGTGGCCCACGCCTTCAATCCCAGCACTTGGGAGGCAGAGGCAGGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGGCCCACGCCTTCAATCCCAGCACTTGGGAGGCAGAGGCAGGG  1045

seq1  GAATTTCTGAGTCCGAGGCCAGCCTGGTCTACAAAGTGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTGAGTCCGAGGCCAGCCTGGTCTACAAAGTGAATTC  1088