MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-309E15
Chromosome	4 (Build37)
Map Location	121,590,323 - 121,726,132
singlet/doublet	doublet
Overlap gene	LOC666931
Upstream gene	3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf, OTTMUSG00000008911, EG666914, LOC666921, LOC666927
Downstream gene	LOC666937, LOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1, Mfsd2, Mycl1, Trit1
Link	Open Mouse BAC browser

Click to get alignment info.

name	3110037I16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73172 MGI:1920422
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp69 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381549 MGI:107794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smap1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69780 MGI:1917030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col9a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12840 MGI:88466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zmpste24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230709 MGI:1890508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmco2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69469 MGI:1916719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042174 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Rlf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109263 MGI:1924705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000008911 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545677 MGI:3652130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666914 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666914 MGI:3648197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666921 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666927 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	LOC666937 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 23 Proteins pseudo : _no_value

name	LOC633269 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC633279 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	9530002B09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77432 MGI:1924682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19063 MGI:1298204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12331 MGI:88262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mfsd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76574 MGI:1923824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mycl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16918 MGI:96799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trit1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66966 MGI:1914216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110037I16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312138 GeneID:73172 MGI:1920422
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110037I16 gene transcript_id : NM_028457.1

name	Zfp69 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131096 GeneID:381549 MGI:107794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 69 transcript_id : NM_001005788.2

name	Smap1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981559 GeneID:69780 MGI:1917030
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal membrane-associated protein 1-like transcript_id : NM_133716.2

name	Col9a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680977 GeneID:12840 MGI:88466
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IX, alpha 2 transcript_id : NM_007741.1

name	Zmpste24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129981 GeneID:230709 MGI:1890508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc metallopeptidase, STE24 homolog (S. cerevisiae) transcript_id : NM_172700.2

name	Tmco2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486794 GeneID:69469 MGI:1916719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled-coil domains 2 transcript_id : NM_001081312.1

name	Rlf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486603 GeneID:109263 MGI:1924705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rearranged L-myc fusion sequence transcript_id : NM_001081013.1

name	OTTMUSG00000008911 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386171 GeneID:545677 MGI:3652130
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000008911 transcript_id : NM_001033791.2

name	EG666914 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252887 GeneID:666914 MGI:3648197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG666914 transcript_id : XM_986980.2

name	LOC666921 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372249 GeneID:666921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical LOC666921 transcript_id : XM_987018.1

name	LOC666927 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252889 GeneID:666927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical LOC666927 transcript_id : XM_987049.2

name	LOC666931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253078 GeneID:666931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : hypothetical LOC666931 transcript_id : XM_987080.2

name	LOC633269 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372500 GeneID:633269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to urea transporter transcript_id : XM_987282.1

name	LOC633279 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372502 GeneID:633279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to AUMP transcript_id : XM_987307.1

name	9530002B09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292435 GeneID:77432 MGI:1924682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530002B09 gene transcript_id : NM_023865.3

name	Ppt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121674796 GeneID:19063 MGI:1298204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : palmitoyl-protein thioesterase 1 transcript_id : NM_008917.2

name	Cap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560729 GeneID:12331 MGI:88262
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAP, adenylate cyclase-associated protein 1 (yeast) transcript_id : NM_007598.2

name	Mfsd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037448 GeneID:76574 MGI:1923824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major facilitator superfamily domain containing 2 transcript_id : NM_029662.1

name	Mycl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328139 GeneID:16918 MGI:96799
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) transcript_id : NM_008506.2

name	Trit1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354403 GeneID:66966 MGI:1914216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tRNA isopentenyltransferase 1 transcript_id : NM_025873.2

name	3110037I16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312139 CCDS:CCDS18596.1 GeneID:73172 MGI:1920422
definition	codon_start : 1 product : hypothetical protein LOC73172 protein_id : NP_082733.1

name	Zfp69 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54261738 CCDS:CCDS18597.1 GeneID:381549 MGI:107794
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Zfp63p product : zinc finger protein 69 protein_id : NP_001005788.1

name	Smap1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981560 CCDS:CCDS18598.1 GeneID:69780 MGI:1917030
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 note : novel protein containing a putative GTPase activating protein for Arf domain product : stromal membrane-associated protein 1-like protein_id : NP_598477.2

name	Col9a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680978 CCDS:CCDS18599.1 GeneID:12840 MGI:88466
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : procollagen, type IX, alpha 2 protein_id : NP_031767.1

name	Zmpste24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370012 CCDS:CCDS18600.1 GeneID:230709 MGI:1890508
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IDA] [Evidence IMP]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006998 - nuclear membrane organization and biogenesis [Evidence IMP] [Evidence IGI]; GO:0030327 - prenylated protein catabolism [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : farnesylated-proteins converting enzyme 1 product : zinc metalloproteinase, STE24 homolog protein_id : NP_766288.1

name	Tmco2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486795 GeneID:69469 MGI:1916719
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane and coiled-coil domains 2 protein_id : NP_001074781.1

name	Rlf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486604 GeneID:109263 MGI:1924705
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : rearranged L-myc fusion sequence protein_id : NP_001074482.1

name	OTTMUSG00000008911 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702113 GeneID:545677 MGI:3652130
definition	codon_start : 1 product : hypothetical protein LOC545677 protein_id : NP_001028963.1

name	EG666914 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252888 GeneID:666914 MGI:3648197
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992074.2

name	LOC666921 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372250 GeneID:666921
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992112.1

name	LOC666927 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252890 GeneID:666927
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992143.2

name	LOC666931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253079 GeneID:666931
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992174.2

name	LOC633269 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372501 GeneID:633269
definition	codon_start : 1 product : similar to urea transporter protein_id : XP_992376.1

name	LOC633279 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372503 GeneID:633279
definition	codon_start : 1 product : similar to AUMP protein_id : XP_992401.1

name	9530002B09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14010845 CCDS:CCDS18603.1 GeneID:77432 MGI:1924682
definition	codon_start : 1 note : palmitoyl protein thioesterase-like protein; ventral prostrate predominant 1 product : palmitoyl-protein thioesterase-like protein protein_id : NP_076354.1

name	Ppt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121674797 GeneID:19063 MGI:1298204
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0005764 - lysosome [Evidence IDA] [Evidence IMP] [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008474 - palmitoyl-(protein) hydrolase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0008344 - adult locomotory behavior [Evidence IMP]; GO:0008306 - associative learning [Evidence IMP]; GO:0044257 - cellular protein catabolism [Evidence IMP]; GO:0007625 - grooming behavior [Evidence IMP]; GO:0007040 - lysosome organization and biogenesis [Evidence IMP]; GO:0007269 - neurotransmitter secretion [Evidence IMP]; GO:0006907 - pinocytosis [Evidence ISS]; GO:0002084 - protein depalmitoylation [Evidence IMP]; GO:0006464 - protein modification [Evidence IEA]; GO:0006898 - receptor mediated endocytosis [Evidence ISS]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 product : palmitoyl-protein thioesterase 1 protein_id : NP_032943.2

name	Cap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671666 CCDS:CCDS18604.1 GeneID:12331 MGI:88262
definition	GO_component : GO:0030864 - cortical actin cytoskeleton [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IMP]; GO:0001667 - ameboidal cell migration [Evidence IMP]; GO:0000902 - cell morphogenesis [Evidence IGI]; GO:0006898 - receptor mediated endocytosis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : adenylyl cyclase-associated CAP protein, yeast homolog 1; adenylyl cyclase-associated CAP protein homolog 1 (S. cerevisiae, S. Pombe) iae product : CAP, adenylate cyclase-associated protein 1 protein_id : NP_031624.1

name	Mfsd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037449 CCDS:CCDS18605.1 GeneID:76574 MGI:1923824
definition	codon_start : 1 exception : mismatches in translation product : major facilitator superfamily domain containing 2 protein_id : NP_083938.1

name	Mycl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678704 CCDS:CCDS18606.1 GeneID:16918 MGI:96799
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : lung carcinoma myc related oncogene 1 protein_id : NP_032532.1

name	Trit1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229019 CCDS:CCDS18607.1 GeneID:66966 MGI:1914216
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004811 - tRNA isopentenyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 product : tRNA isopentenyltransferase 1 protein_id : NP_080149.2

name	LOC100042174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042174
definition	number : 2 pseudo : _no_value

name	LOC100042174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042174
definition	number : 1 pseudo : _no_value

name	LOC666937 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253080 GeneID:666937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 23 Proteins product : similar to creatine kinase pseudo : _no_value transcript_id : XR_030521.1

clone name	MSMg01-095P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-413G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184D15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-490C15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-076A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-137L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-309E15.b	B6Ng01-309E15.g
ACC	GA101568	GA101569
length	1,154	754
definition	B6Ng01-309E15.b	B6Ng01-309E15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(121,724,989 - 121,726,132)	(121,590,323 - 121,591,076)
sequence	gaattcctaattttcccataataaaatttaaattaaacaggattaatgct atagagatctaagtacacctcccttgtcaccaattgaactccagacacat atttcaactgtcagaagtacaggtctattgcttgccatccctacatgtaa gcttacatgtgaatgctgcatcctttgccttcacagcaaagttacctgcc tgtctgagtagaatgacacaaatatgctctgtccctctccactggctcac tgtctctgtaaataacaataatgttcagcttgatgctcactgataacttt agagtcatccttgactcctgtcatctgtgcatgacattccatcaacaaat atgactcattctcaccaccctgctgagagcagtcttacttgtcaatctat ctgagctgttacaaaagccttctcactggtctccttgattatatggtttg cctctgaagttgtcctccacaagtatccaagaaatgcatttaagaacatc ccctgtgtgtagtgagtgtacagcaggtaaagtcagatgtcaagactgac atcctgaggtcagttacagagtcccttatagatgaaagacagaactgact ctcctaaattgtcctctgaccttcaaaagaacaccatggcatatgtatta caagatacaataaataaatgaatgtaataaaaattgttttggagagctgg agacttggctagtaattgactgtgcacagttctaatagaaactcacctta gaatcccaacacctacatcagttgtttcacagatgcctgttctccatctg cagaggctctgaaaccctcttctggactttctggcacctgcatacacatt caaacacatgtatgttatttgcatattaactgccacatgtctgggaacca tcttccctcaaaagtgtttgggagagatggccacctaatgattcatttgt gacacagaattctgacatcctgaggaactacctacttcttcattagtggt caatagtttttatgtaccattgcaagaatggtattttacaagggctgtta tcttagtggtagaattcaactattaaggcggtattctttaatgtgtgggt ggctagatttgattgcaccactgttttatagtcagcacctcagaaatggc ttgc	gaattctaatggacatatgaaggtctcaacctgtatgaattacttttctg ttgttgtgattaaaaacaccataataagatgcaacttgagtagagttcat atgggcttatgtttccaaagtgataagagttcttcatgtcagaaagtgat atcaccgggagaaggaaggtaagagagcaaagcttcaactgcaaacatgt agcaggcgaggaaactggaagtgaggcaaggctgtgaggccttcaagccc accccagtgatatgctcttccagcacaactggacccctgtaatatcacca aactgcatcgtaacaggggaccacattaaaaatatgtgagccaaagggag aaattctcatttataccatgataaaactaaatcactaagcttatgaagaa aaatcctgttcccaacaatcccttccattgatttctcactgcttgatttt ttaggatgtggataacacaatgttgtatgtcagatcatctaaatgtgata ctctcactatggagccgaagttgtcatatggccacaatcttgttcaattt tctgatgtactccaatttgtgtaagcattctatttcatggcaacactttc ataaaattgatatttcttgtattcacataaattgacattaattattttga aatcctcttatatcaattaaaagaaattatctttaagatgtgacaaaggt atttggatcttaatttaatttcatcctttgcctgtgggtgtttgtaaatg tgtg
quality values	Open. Hide. 41 31 30 22 58 58 58 58 62 62 62 62 62 62 62 62 37 27 62 62 62 62 62 62 62 54 47 62 43 62 62 51 51 37 28 27 28 28 24 45 56 44 46 62 62 62 59 59 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 54 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 37 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 58 58 49 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 49 58 58 54 54 54 58 58 58 58 58 36 24 58 58 58 51 54 58 54 52 52 54 54 58 51 58 58 58 58 58 58 50 53 53 51 58 53 58 58 58 58 51 54 32 51 48 58 54 49 58 58 58 40 58 58 58 54 58 51 49 58 51 51 58 58 53 58 49 49 54 58 58 49 33 58 58 58 53 53 58 58 58 42 58 50 50 48 24 44 52 58 58 58 49 50 52 52 49 58 51 50 51 41 50 49 39 58 52 58 34 42 51 35 58 49 51 58 47 50 52 58 49 50 58 58 40 41 58 31 53 53 53 54 58 58 58 50 39 58 54 41 54 54 53 54 29 54 37 54 27 49 51 54 54 54 34 37 27 51 41 51 47 52 45 42 45 42 53 40 32 54 50 51 33 50 54 45 52 47 45 53 53 45 52 53 53 45 47 51 38 41 33 48 36 46 37 52 41 40 42 42 49 44 52 27 31 33 37 31 22 35 29 38 42 32 40 46 42 34 41 32 53 40 35 32 53 45 53 34 49 35 39 29 34 32 32 34 31 34 32 47 32 51 27 47 45 45 32 34 31 31 31 40 30 31 31 29 46 18 31 31 31 30 30 25 46 45 31 25 40 36 40 30 44 31 35 32 42 32 31 20 30 47 25 31 34 43 46 27 31 31 30 31 38 35 29 31 31 42 27 31 29 32 41 42 33 46 24 31 25 42 29 38 43 36 32 38 42 27 31 24 16 47 32 30 31 30 31 31 27 32 31 34 31 32 41 32 30 26 30 25 31 31 31 36 32 24 47 13 31 28 24 24 23 32 32 27 37 31 48 31 33 29 31 48 48 33 17 31 31 27 36 25 24 41 28 38 17 38 17 23 13 23 33 20 26 16 17 15 21 17 18 24 31 22 21 34 34 27 24 43 24 14 20 26 21 16 18 21 22 17 29 24 14 25 31 34 32 32 19 8 24 18 8 11 26 32 17 16 24 29 23 32 31 18 17 17 27 17 31 8 23 22 33 22 14 19 13 18 7 12 13 21 5 11 21 16 19 28 19 24 40 34 30 9 13 7 11 17 8 14 6 27 6 11 21 16 11 5 10 17 21 6 8 19 5 8 14 47 47 27 20 22 7 9 19 47 11 23 13 20 15 23 21 26 19 10 19 9 5 5 14 11 12 20 20 18 14 4 8 8 11 12 7 10 11 9 13 21 9 5 7 18 10 16 7 6 5 12 14 8 24 11 14 19 7 5 4 5 2 5 29 6 3 4 6 11 16 9 3 2 5 11 9 11 13 5 4 17 4 7 8 6 6 4 4 6 7 12 17 5 6 7 6 7 16 7 3 4 8 9 4 6 6 20 10 8 18 25 17 4 10 5 6 11 12 2 5	Open. Hide. 62 38 43 42 62 62 62 56 56 51 38 21 16 21 22 21 21 21 27 37 46 59 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 56 59 34 43 33 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 59 59 62 42 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 42 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 52 58 58 58 58 58 58 58 58 58 58 58 49 49 54 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 52 58 58 58 58 58 58 58 58 54 52 58 54 58 58 58 58 58 58 58 54 58 54 54 58 58 58 51 47 58 58 58 58 58 58 58 54 51 58 48 58 45 46 58 58 58 58 58 58 58 54 48 58 58 58 54 53 49 58 50 58 58 58 49 48 52 53 52 58 58 38 35 58 58 49 53 53 47 58 58 58 58 58 58 50 41 41 58 51 40 51 49 58 49 58 51 58 58 58 46 49 50 58 53 53 39 31 39 49 26 43 58 58 52 58 54 35 50 41 51 51 50 54 42 51 52 51 51 49 39 44 52 53 40 54 46 54 39 33 10 22 40 54 50 51 52 54 54 44 38 53 35 28 19 42 51 52 51 31 24 54 49 32 51 33 30 45 54 53 54 42 45 37 42 53 38 42 45 53 51 37 32 53 41 49 33 32 31 53 31 53 47 49 40 34 47 47 45 52 35 53 53 35 34 31 23 51 34 29 18 31 23 36 31 38 32 40 30 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_121724989_121726132
seq2: B6Ng01-309E15.b_44_1197 (reverse)

seq1  GCAAGC--ATTCTGA-GTGCTGAACTAT-AAACA--TGTGCCATCAAACC  44
      ||||||   |||||| |||||| ||||| |||||   |||| |||||| |
seq2  GCAAGCCATTTCTGAGGTGCTG-ACTATAAAACAGTGGTGCAATCAAATC  49

seq1  TAG-CACCCACACATTTAAAGAATAC--GCTTAATAGTTTGATTTCTA-C  90
      ||| |||||||||| |||||||||||   |||||||| |||| ||||| |
seq2  TAGCCACCCACACA-TTAAAGAATACCGCCTTAATAG-TTGAATTCTACC  97

seq1  ACTAAGATAACAGCCCTTGTAAAATACCATTCTTGC-ATTGTACAT-AAA  138
      |||||||||||||||||||||||||||||||||||| || |||||| |||
seq2  ACTAAGATAACAGCCCTTGTAAAATACCATTCTTGCAATGGTACATAAAA  147

seq1  ACTATTGACCACTAATGAAGAAGTAGGTAGTTCCTCAGGATGTCAGAATT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGACCACTAATGAAGAAGTAGGTAGTTCCTCAGGATGTCAGAATT  197

seq1  CTGTGTCACAAATGAATCATTAGGTGGCCATCTCTCCCAAACACTTTTGA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCACAAATGAATCATTAGGTGGCCATCTCTCCCAAACACTTTTGA  247

seq1  GGGAAGATGGTT-CCAGACATGTGGCAGTTAATATGCAAATAACATACAT  287
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATGGTTCCCAGACATGTGGCAGTTAATATGCAAATAACATACAT  297

seq1  GTGTTTGAATGTGTATGCAGGTGCCAGAAAGTCCAGAAGAGGGTTTCAGA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGAATGTGTATGCAGGTGCCAGAAAGTCCAGAAGAGGGTTTCAGA  347

seq1  GCCTCTGCAGATGGAGAACAGGCATCTGTGAAACAACTGATGTAGGTGTT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCAGATGGAGAACAGGCATCTGTGAAACAACTGATGTAGGTGTT  397

seq1  GGGATTCTAAGGTGAGTTTCTATTAGAACTGTGCACAGTCAATTACTAGC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTAAGGTGAGTTTCTATTAGAACTGTGCACAGTCAATTACTAGC  447

seq1  CAAGTCTCCAGCTCTCCAAAACAATTTTTATTACATTCATTTATTTATTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTCCAGCTCTCCAAAACAATTTTTATTACATTCATTTATTTATTG  497

seq1  TATCTTGTAATACATATGCCATGGTGTTCTTTTGAAGGTCAGAGGACAAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGTAATACATATGCCATGGTGTTCTTTTGAAGGTCAGAGGACAAT  547

seq1  TTAGGAGAGTCAGTTCTGTCTTTCATCTATAAGGGACTCTGTAACTGACC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAGTCAGTTCTGTCTTTCATCTATAAGGGACTCTGTAACTGACC  597

seq1  TCAGGATGTCAGTCTTGACATCTGACTTTACCTGCTGTACACTCACTACA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGTCAGTCTTGACATCTGACTTTACCTGCTGTACACTCACTACA  647

seq1  CACAGGGGATGTTCTTAAATGCATTTCTTGGATACTTGTGGAGGACAACT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGATGTTCTTAAATGCATTTCTTGGATACTTGTGGAGGACAACT  697

seq1  TCAGAGGCAAACCATATAATCAAGGAGACCAGTGAGAAGGCTTTTGTAAC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCAAACCATATAATCAAGGAGACCAGTGAGAAGGCTTTTGTAAC  747

seq1  AGCTCAGATAGATTGACAAGTAAGACTGCTCTCAGCAGGGTGGTGAGAAT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGATAGATTGACAAGTAAGACTGCTCTCAGCAGGGTGGTGAGAAT  797

seq1  GAGTCATATTTGTTGATGGAATGTCATGCACAGATGACAGGAGTCAAGGA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATATTTGTTGATGGAATGTCATGCACAGATGACAGGAGTCAAGGA  847

seq1  TGACTCTAAAGTTATCAGTAAGCATCAAGCTGAACATTATTGTTATTTAC  887
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGACTCTAAAGTTATCAGTGAGCATCAAGCTGAACATTATTGTTATTTAC  897

seq1  AGAGACAGTGAGCCAGTGGAGAGGGACAGAGCATATTTGTGTCATTCTAC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGTGAGCCAGTGGAGAGGGACAGAGCATATTTGTGTCATTCTAC  947

seq1  TCAGACAGGCAGGTAACTTTGCTGTGAAGGCAAAGGATGCAGCATTCACA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGGCAGGTAACTTTGCTGTGAAGGCAAAGGATGCAGCATTCACA  997

seq1  TGTAAGCTTACATGTAGGGATGGCAAGCAATAGACCTGTACTTCTGACAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTTACATGTAGGGATGGCAAGCAATAGACCTGTACTTCTGACAG  1047

seq1  TTGAAATATGTGTCTGGAGTTCAATTGGTGACAAGGGAGGTGTACTTAGA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATGTGTCTGGAGTTCAATTGGTGACAAGGGAGGTGTACTTAGA  1097

seq1  TCTCTATAGCATTAATCCTGTTTAATTTAAATTTTATTATGGGAAAATTA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATAGCATTAATCCTGTTTAATTTAAATTTTATTATGGGAAAATTA  1147

seq1  GGAATTC  1144
      |||||||
seq2  GGAATTC  1154

seq1: chr4_121590323_121591076
seq2: B6Ng01-309E15.g_65_818

seq1  GAATTCTAATGGACATATGAAGGTCTCAACCTGTATGAATTACTTTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGGACATATGAAGGTCTCAACCTGTATGAATTACTTTTCTG  50

seq1  TTGTTGTGATTAAAAACACCATAATAAGATGCAACTTGAGTAGAGTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGATTAAAAACACCATAATAAGATGCAACTTGAGTAGAGTTCAT  100

seq1  ATGGGCTTATGTTTCCAAAGTGATAAGAGTTCTTCATGTCAGAAAGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTATGTTTCCAAAGTGATAAGAGTTCTTCATGTCAGAAAGTGAT  150

seq1  ATCACCGGGAGAAGGAAGGTAAGAGAGCAAAGCTTCAACTGCAAACATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCGGGAGAAGGAAGGTAAGAGAGCAAAGCTTCAACTGCAAACATGT  200

seq1  AGCAGGCGAGGAAACTGGAAGTGAGGCAAGGCTGTGAGGCCTTCAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCGAGGAAACTGGAAGTGAGGCAAGGCTGTGAGGCCTTCAAGCCC  250

seq1  ACCCCAGTGATATGCTCTTCCAGCACAACTGGACCCCTGTAATATCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTGATATGCTCTTCCAGCACAACTGGACCCCTGTAATATCACCA  300

seq1  AACTGCATCGTAACAGGGGACCACATTAAAAATATGTGAGCCAAAGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCATCGTAACAGGGGACCACATTAAAAATATGTGAGCCAAAGGGAG  350

seq1  AAATTCTCATTTATACCATGATAAAACTAAATCACTAAGCTTATGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCATTTATACCATGATAAAACTAAATCACTAAGCTTATGAAGAA  400

seq1  AAATCCTGTTCCCAACAATCCCTTCCATTGATTTCTCACTGCTTGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGTTCCCAACAATCCCTTCCATTGATTTCTCACTGCTTGATTTT  450

seq1  TTAGGATGTGGATAACACAATGTTGTATGTCAGATCATCTAAATGTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGTGGATAACACAATGTTGTATGTCAGATCATCTAAATGTGATA  500

seq1  CTCTCACTATGGAGCCGAAGTTGTCATATGGCCACAATCTTGTTCAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTATGGAGCCGAAGTTGTCATATGGCCACAATCTTGTTCAATTT  550

seq1  TCTGATGTACTCCAATTTGTGTAAGCATTCTATTTCATGGCAACACTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGTACTCCAATTTGTGTAAGCATTCTATTTCATGGCAACACTTTC  600

seq1  ATAAAATTGATATTTCTTGTATTCACATAAATTGACATTAATTATTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTGATATTTCTTGTATTCACATAAATTGACATTAATTATTTTGA  650

seq1  AATCCTCTTATATCAATTAAAAGAAATTATCTTTAAGATGTGACAAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTTATATCAATTAAAAGAAATTATCTTTAAGATGTGACAAAGGT  700

seq1  ATTTGGATCTTAATTTAATTTCATCCTTTGCCTGTGGGTGTTTGTAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATCTTAATTTAATTTCATCCTTTGCCTGTGGGTGTTTGTAAATG  750

seq1  TGTG  754
      ||||
seq2  TGTG  754

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Alignment Information