BAC Information

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BAC

Clone NameB6Ng01-310F10
Chromosome4 (Build37)
Map Location 15,063,049 - 15,213,192
singlet/doubletdoublet
Overlap geneEfcbp1, Tmem64
Upstream geneLOC625831, LOC433687, LOC100040030, LOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551
Downstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310F10.bB6Ng01-310F10.g
ACCGA102341GA102342
length3061,169
definitionB6Ng01-310F10.b B6Ng01-310F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,063,049 - 15,063,354)(15,212,005 - 15,213,192)
sequence
acagcaggtatgaaaatatacacaaggtctgcacaagattggacctgttt
tcaccctgtagtggaactgggaacggtaggctccacccttctttgagaat
gaataagaagttattgattcatgagggaaagaagttttcttcacatgtgg
tcatgtgatcaaactaaatgaaactcgttaggtcacgaaaagtaaaaaga
agaaaaggcatgaaagaagaataggagcaaattggaaagaaatagagaaa
ggattagtaaggcaggagagatagtgtgtgtgtgtgtgtatgtgtgtatg
tacgtg
gaattccacagtttccccaaggggacactgtatgggcattggggaaagcc
actgtgggacactagcagctgggtacagtgcttcaagggtgagtatggct
gactctgaaaatatccattcacttctgaatataaactgaaaatgaacatt
ccaacaatgagacttgataacatgattttttcaccaagagtacagatttc
aattattcacaaatcagatgatcaaataaaaatgacatgagagcacagta
aatataaacatggttttaaaaagaggtaatgcaaacttgtcaaagtggca
atcttagaaaaaatagaacaaaactttaaccagattgaaaactaggtgga
ctctaaatgaatataaagcaactttagactgtagttaaccaatgtaagga
caccatgtttcatttctatgaatatgcatttcttgaatacatatggctgg
aggcaatatgtgtccagagcactgcttgagaacttctgctgttgtaagcc
cagggtacaggattagagacagtgaacatgatacagctctgctgcacaga
ttacagtgaatataaatataacccagccaccagccaccagatgcacctat
caaataacatggcaataatgaagtgctgtttcctggtaccttgggaatac
taaagaaagaaaaagcattgctacattagtactttagaaattgtcaatcc
atactattataaaagttgatgatttattatataaaattatgattggcaga
atacagaaaagtatttcttttgtctttacatatgtaatacaattaccagg
gaaagtgttaacatttggaagaagttattacaaattaccaaaaggtattc
atttggtgaagtcattcaagttacaaatgctaagtaaatataatgcactt
caaaatacatgaattgtaaagcaagcatgaaaataatgatctcaataaag
attccctttaacgaaaaatagcaatgagaaacacagaaaaatgttgcagg
tgtactaaaaagataaatcaatatttcttttattgggatgtaaactactg
aacctactaaccagaacagtaagactcagtatgtataagttgtttttcta
acgataaccaaggtctgagcaagcatgacatgtagacagtgcctcgtcag
taactctgtacttctactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15063049_15063354
seq2: B6Ng01-310F10.b_54_359

seq1  ACAGCAGGTATGAAAATATACACAAGGTCTGCACAAGATTGGACCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGTATGAAAATATACACAAGGTCTGCACAAGATTGGACCTGTTT  50

seq1  TCACCCTGTAGTGGAACTGGGAACGGTAGGCTCCACCCTTCTTTGAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGTAGTGGAACTGGGAACGGTAGGCTCCACCCTTCTTTGAGAAT  100

seq1  GAATAAGAAGTTATTGATTCATGAGGGAAAGAAGTTTTCTTCACATGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGAAGTTATTGATTCATGAGGGAAAGAAGTTTTCTTCACATGTGG  150

seq1  TCATGTGATCAAACTAAATGAAACTCGTTAGGTCACGAAAAGTAAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGATCAAACTAAATGAAACTCGTTAGGTCACGAAAAGTAAAAAGA  200

seq1  AGAAAAGGCATGAAAGAAGAATAGGAGCAAATTGGAAAGAAATAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGCATGAAAGAAGAATAGGAGCAAATTGGAAAGAAATAGAGAAA  250

seq1  GGATTAGTAAGGCAGGAGAGATAGTGTGTGTGTGTGTGTATGTGTGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGTAAGGCAGGAGAGATAGTGTGTGTGTGTGTGTATGTGTGTATG  300

seq1  TACGTG  306
      ||||||
seq2  TACGTG  306

seq1: chr4_15212005_15213192
seq2: B6Ng01-310F10.g_69_1237 (reverse)

seq1  CAGTAGAAGACCAGAGTAACTGGGACGAAAGGCACCTGGTCTACAGTGCA  50
      |||||||||  |||||| |||  ||||  ||||||   |||||||   ||
seq2  CAGTAGAAGTACAGAGTTACT--GACG--AGGCAC--TGTCTACATGTCA  44

seq1  TGCCTGGCCTCCAGACCTTTGTTATCGGTAGAAAAACAAC-TATACATAC  99
      ||| ||  || |||||||| ||||||| |||||||||||| |||||||||
seq2  TGCTTG--CT-CAGACCTTGGTTATCGTTAGAAAAACAACTTATACATAC  91

seq1  TGAGTCCTTACTG-TCTGTTTAGTTAAGTTTCAGTTAGTTTAACCATCCC  148
      ||||| ||||||| |||| |||||  || ||||| |||||||  ||||||
seq2  TGAGT-CTTACTGTTCTGGTTAGT--AGGTTCAG-TAGTTTA--CATCCC  135

seq1  AATAAAAGAAATATTTGATTTATCCTTTTTAGTACAACTTGGCAACATTT  198
      ||||||||||||| ||||||||| |||||||||||| ||  |||||||||
seq2  AATAAAAGAAATA-TTGATTTAT-CTTTTTAGTACACCT--GCAACATTT  181

seq1  TTCTTGTGTTTCTCATTGGCTATTTTTCGTTAAA-GGAATCTTTATTTGA  247
      ||| ||||||||||||| |||||||||||||||| |||||||||| ||||
seq2  TTC-TGTGTTTCTCATT-GCTATTTTTCGTTAAAGGGAATCTTTA-TTGA  228

seq1  GATCATTATTTTCATGCTTGCTTTACAATTCATGTATTTTGAAGTGCATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTATTTTCATGCTTGCTTTACAATTCATGTATTTTGAAGTGCATT  278

seq1  ATATTTACTTAGCATTTGTAACTTGAATGACTTCACCAAATGAATACCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTTAGCATTTGTAACTTGAATGACTTCACCAAATGAATACCTT  328

seq1  TTGGTAATTTGTAATAACTTCTTCCAAATGTTAACACTTTCCCTGGTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAATTTGTAATAACTTCTTCCAAATGTTAACACTTTCCCTGGTAAT  378

seq1  TGTATTACATATGTAAAGACAAAAGAAATACTTTTCTGTATTCTGCCAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACATATGTAAAGACAAAAGAAATACTTTTCTGTATTCTGCCAAT  428

seq1  CATAATTTTATATAATAAATCATCAACTTTTATAATAGTATGGATTGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTTATATAATAAATCATCAACTTTTATAATAGTATGGATTGACA  478

seq1  ATTTCTAAAGTACTAATGTAGCAATGCTTTTTCTTTCTTTAGTATTCCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAAGTACTAATGTAGCAATGCTTTTTCTTTCTTTAGTATTCCCA  528

seq1  AGGTACCAGGAAACAGCACTTCATTATTGCCATGTTATTTGATAGGTGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCAGGAAACAGCACTTCATTATTGCCATGTTATTTGATAGGTGCA  578

seq1  TCTGGTGGCTGGTGGCTGGGTTATATTTATATTCACTGTAATCTGTGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGCTGGTGGCTGGGTTATATTTATATTCACTGTAATCTGTGCAG  628

seq1  CAGAGCTGTATCATGTTCACTGTCTCTAATCCTGTACCCTGGGCTTACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGTATCATGTTCACTGTCTCTAATCCTGTACCCTGGGCTTACAA  678

seq1  CAGCAGAAGTTCTCAAGCAGTGCTCTGGACACATATTGCCTCCAGCCATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAAGTTCTCAAGCAGTGCTCTGGACACATATTGCCTCCAGCCATA  728

seq1  TGTATTCAAGAAATGCATATTCATAGAAATGAAACATGGTGTCCTTACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCAAGAAATGCATATTCATAGAAATGAAACATGGTGTCCTTACAT  778

seq1  TGGTTAACTACAGTCTAAAGTTGCTTTATATTCATTTAGAGTCCACCTAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAACTACAGTCTAAAGTTGCTTTATATTCATTTAGAGTCCACCTAG  828

seq1  TTTTCAATCTGGTTAAAGTTTTGTTCTATTTTTTCTAAGATTGCCACTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATCTGGTTAAAGTTTTGTTCTATTTTTTCTAAGATTGCCACTTT  878

seq1  GACAAGTTTGCATTACCTCTTTTTAAAACCATGTTTATATTTACTGTGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTTTGCATTACCTCTTTTTAAAACCATGTTTATATTTACTGTGCT  928

seq1  CTCATGTCATTTTTATTTGATCATCTGATTTGTGAATAATTGAAATCTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTCATTTTTATTTGATCATCTGATTTGTGAATAATTGAAATCTGT  978

seq1  ACTCTTGGTGAAAAAATCATGTTATCAAGTCTCATTGTTGGAATGTTCAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGGTGAAAAAATCATGTTATCAAGTCTCATTGTTGGAATGTTCAT  1028

seq1  TTTCAGTTTATATTCAGAAGTGAATGGATATTTTCAGAGTCAGCCATACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTATATTCAGAAGTGAATGGATATTTTCAGAGTCAGCCATACT  1078

seq1  CACCCTTGAAGCACTGTACCCAGCTGCTAGTGTCCCACAGTGGCTTTCCC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTGAAGCACTGTACCCAGCTGCTAGTGTCCCACAGTGGCTTTCCC  1128

seq1  CAATGCCCATACAGTGTCCCCTTGGGGAAACTGTGGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCCATACAGTGTCCCCTTGGGGAAACTGTGGAATTC  1169