BAC Information

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BAC

Clone NameB6Ng01-310G21
Chromosome4 (Build37)
Map Location 149,702,056 - 149,817,894
singlet/doubletdoublet
Overlap geneRere
Upstream geneLOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091
Downstream geneSlc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310G21.bB6Ng01-310G21.g
ACCGA102409GA102410
length1,1681,097
definitionB6Ng01-310G21.b B6Ng01-310G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,702,056 - 149,703,234)(149,816,790 - 149,817,894)
sequence
gaattccagatgggattccaagctaattctgccagcattttcatgtgggg
tatgactcccagttcctcattcctgcaaggcaggcattttacttgggttt
attttgatcattcatcattcattcattcattcattcattcattcgaggca
gggtttctttgtgtagtcctagcggtctttggactcatagagatgcacct
gtctctgcctcccaagtactgggatcaaaggtgtgcgccaccacagccca
gctttccttcctctcttatttatctattcctgttttgtctttgttgcatt
ttccactaatggaaaggaatattcttgtttgagtttgtgtcaacagaggt
gcctggctcatttcatttatctgctcttggtctttttcttgttatacttt
tccatccttgtcttttgaagggtaatgcttatttctgtgttacattagta
aactctgaagtatggagttgattttaataattttctcacataaaggaatt
ttactttaatgtgtcagaaagaggtaataattgacattacaatactagta
ttaatttttaagggaaaacataacatttcactgactcaatactttttgcc
tttttttttaatagattttttttatttcgtattttcctcaattacatttc
caatgctagctcaaaagtcccccatgccctccccactttttgccttttct
tgaaaggactattttttcttcataccagaagagggcatagaatcccatta
cagatggttgtgagccaccatgtagttgctgggaattgagctcaagacct
ggaagagcagtcagtgctcgtaacagctgacctatctctccagccccgat
ttttgcttttttgatcctctttgctaagtatctttttgatagcatcttga
catttaggtaaaaggataacatttgctaactgacagaattagaaggctct
gagtgcttgcctgacataaggcaaccttggcttcaaaactgagaacatct
gggtggagaggtgcacacctttattcctagcactcaggagctgaggcagt
cagatctcctgttgagtttgaagccagcctgtctacagtgggttccagga
caggccaggctcactaagacctacagggaacaccacaaactgaagatcag
ggtggtaatgcatgcctt
gaattcttcaccatcaccatcatcatcatcaccaccatcatcaccatcat
caccatcaccaccatcaccatcatcacagctgctgctgcagtttcacaag
tgaacaaactgaggctcaaggaaatgaagtctgtgattacagaacaaagc
acttccagcaagactgagtcgatactacagtatcaagagtgaaaggtatg
atttaactgctatgggggaatcatttctaatgaaaaccacaagtaacccc
caccccatggctcccaccagagagcactaagatgcagcagctgagcagag
gacaaggcacggatggcaagcaggactgaagaaggattctggggaggatc
gaccccacagaggaagaggggcccagaacccagcacagcaaggtaagaaa
ggagaagatgaggtcaaagaatcaggctcttttctgcatctcagagctgc
aaactgagctttaccgtccataaacctgcaagaaaacagacaactcttcc
accactggccagaatcccatttcctttgtttttgtttgttgttgttgttt
gttttgtttcctttgagacagggtttctctgtgtagccctggctgttcta
gaactacctttgtagaccaggctggtctgagatctgcctgcttttgcctc
tgggaatgctgggattaaaggcgtgtatcaccaccaccaccctggccaga
gaatccatttctatgaagcacagctctaaaaatgattccagaaatcctac
tgaactcattaaacaaaaaacttaagaagagtttttgtcacctatacagc
tttgtaaccatcaatcaacagaaagctgtcccgagaaatctccctcatga
cttccacaggccttctttaaacacagtctctaaacagtcaagtaaaattt
atttccattgctttgaaaaggggaaagcaacaaattgccagcttacatta
aacaggtaacaaaataaaggattaaagtagactgatccatatgctacaac
aaaaagtcaatctaagaaatcaacatgagtacaatatttactctttcagc
tgagcagctgtaacaccactgaaaagaactagtgctagagacaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149702056_149703234
seq2: B6Ng01-310G21.b_46_1213

seq1  GAATTCCAGATGGGATTCCAAGCTAATTCTGCCAGCATTTTCATGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGGGATTCCAAGCTAATTCTGCCAGCATTTTCATGTGGGG  50

seq1  TATGACTCCCAGTTCCTCATTCCTGCAAGGCAGGCATTTTACTTGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTCCCAGTTCCTCATTCCTGCAAGGCAGGCATTTTACTTGGGTTT  100

seq1  ATTTTGATCATTCATCATTCATTCATTCATTCATTCATTCATTCGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATCATTCATCATTCATTCATTCATTCATTCATTCATTCGAGGCA  150

seq1  GGGTTTCTTTGTGTAGTCCTAGCGGTCTTTGGACTCATAGAGATGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTTTGTGTAGTCCTAGCGGTCTTTGGACTCATAGAGATGCACCT  200

seq1  GTCTCTGCCTCCCAAGTACTGGGATCAAAGGTGTGCGCCACCACAGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCCTCCCAAGTACTGGGATCAAAGGTGTGCGCCACCACAGCCCA  250

seq1  GCTTTCCTTCCTCTCTTATTTATCTATTCCTGTTTTGTCTTTGTTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTTCCTCTCTTATTTATCTATTCCTGTTTTGTCTTTGTTGCATT  300

seq1  TTCCACTAATGGAAAGGAATATTCTTGTTTGAGTTTGTGTCAACAGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTAATGGAAAGGAATATTCTTGTTTGAGTTTGTGTCAACAGAGGT  350

seq1  GCCTGGCTCATTTCATTTATCTGCTCTTGGTCTTTTTCTTGTTATACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCTCATTTCATTTATCTGCTCTTGGTCTTTTTCTTGTTATACTTT  400

seq1  TCCATCCTTGTCTTTTGAAGGGTAATGCTTATTTCTGTGTTACATTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTTGTCTTTTGAAGGGTAATGCTTATTTCTGTGTTACATTAGTA  450

seq1  AACTCTGAAGTATGGAGTTGATTTTAATAATTTTCTCACATAAAGGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAAGTATGGAGTTGATTTTAATAATTTTCTCACATAAAGGAATT  500

seq1  TTACTTTAATGTGTCAGAAAGAGGTAATAATTGACATTACAATACTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTAATGTGTCAGAAAGAGGTAATAATTGACATTACAATACTAGTA  550

seq1  TTAATTTTTAAGGGAAAACATAACATTTCACTGACTCAATACTTTTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTAAGGGAAAACATAACATTTCACTGACTCAATACTTTTTGCC  600

seq1  TTTTTTTTTAATAGATTTTTTTTATTTCGTATTTTCCTCAATTACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAATAGATTTTTTTTATTTCGTATTTTCCTCAATTACATTTC  650

seq1  CAATGCTAGCTCAAAAGTCCCCCATGCCCTCCCCACTTTTTGCCTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTAGCTCAAAAGTCCCCCATGCCCTCCCCACTTTTTGCCTTTTCT  700

seq1  TGAAAGGACTATTTTTTCTTCATACCAGAAGAGGGCATAGAATCCCATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGACTATTTTTTCTTCATACCAGAAGAGGGCATAGAATCCCATTA  750

seq1  CAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATTGAGCTCAAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATTGAGCTCAAGACCT  800

seq1  GGAAGAGCAGTCAGTGCTCGTAACAGCTGACCTATCTCTCCAGCCCCGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCAGTGCTCGTAACAGCTGACCTATCTCTCCAGCCCCGAT  850

seq1  TTTTGCTTTTTTGATCCTCTTTGCTAAGTATCTTTTTGATAGCATCTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTTTTGATCCTCTTTGCTAAGTATCTTTTTGATAGCATCTTGA  900

seq1  CATTTAGGTAAAAGGATAACATTTGCTAACTGACAGAATTAGAAGGCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGTAAAAGGATAACATTTGCTAACTGACAGAATTAGAAGGCTCT  950

seq1  GAGTGCTTGCCTGACATAAGGGCAACCTTGGCTTCAAAACTGAGAACATC  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGTGCTTGCCTGACATAA-GGCAACCTTGGCTTCAAAACTGAGAACATC  999

seq1  TGGGTGGAGAGGTGCACACCTTTAATCCTAGCACTCAGGAGCTGAGGCAG  1050
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGGTGGAGAGGTGCACACCTTTATTCCTAGCACTCAGGAGCTGAGGCAG  1049

seq1  TCAGATCT-CTG-TGAGTTTGAGGCCAGCCTGGTCTACAAGTGGGTTCCA  1098
      |||||||| ||| ||||||||| |||||||| |||||| |||||||||||
seq2  TCAGATCTCCTGTTGAGTTTGAAGCCAGCCT-GTCTAC-AGTGGGTTCCA  1097

seq1  GGACAGCCAGGGCTACACAAAGAAACATAGAGAGAAACAACAACAAACCT  1148
      |||||| |  |||| ||| |||  || || || |||   || ||||| ||
seq2  GGACAGGCCAGGCT-CACTAAG--ACCTACAGGGAA--CACCACAAA-CT  1141

seq1  GAAAGGAGCCAGGTGTGGTAATGCATGCCTT  1179
      |||  ||  |||| |||||||||||||||||
seq2  GAA--GA-TCAGG-GTGGTAATGCATGCCTT  1168

seq1: chr4_149816790_149817894
seq2: B6Ng01-310G21.g_66_1162 (reverse)

seq1  TCATTGTCTCTAGCACTAGTTCTTTTCAGGTGTGTTACAGCCTGCTCAGC  50
      |||||||||||||||||||||||||||||  ||||||||| |||||||||
seq2  TCATTGTCTCTAGCACTAGTTCTTTTCAGTGGTGTTACAG-CTGCTCAGC  49

seq1  CTGGAAAGAGTTAAATATTGGTACTCATGTTGATTTCTTAGATTGACTTT  100
         ||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  --TGAAAGAG-TAAATATT-GTACTCATGTTGATTTCTTAGATTGACTTT  95

seq1  TTGTTGTTAGCAATATGGATCAGTCTACTTTAATCCTTTATTTTTGTTAC  150
      |||||| |||| |||||||||||||||||||||||||||| |||||||||
seq2  TTGTTG-TAGC-ATATGGATCAGTCTACTTTAATCCTTTA-TTTTGTTAC  142

seq1  CTGTTTAATGTAAGCTGGCAATTTGTTGCTTTCCCCTTTTCAAAGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAATGTAAGCTGGCAATTTGTTGCTTTCCCCTTTTCAAAGCAATG  192

seq1  GAAATAAATTTTACTTGACTGTTTAGAGACTGTGTTTAAAGAAGGCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATTTTACTTGACTGTTTAGAGACTGTGTTTAAAGAAGGCCTGT  242

seq1  GGAAGTCATGAGGGAGATTTCTCGGGACAGCTTTCTGTTGATTGATGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCATGAGGGAGATTTCTCGGGACAGCTTTCTGTTGATTGATGGTT  292

seq1  ACAAAGCTGTATAGGTGACAAAAACTCTTCTTAAGTTTTTTGTTTAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTGTATAGGTGACAAAAACTCTTCTTAAGTTTTTTGTTTAATGA  342

seq1  GTTCAGTAGGATTTCTGGAATCATTTTTAGAGCTGTGCTTCATAGAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTAGGATTTCTGGAATCATTTTTAGAGCTGTGCTTCATAGAAATG  392

seq1  GATTCTCTGGCCAGGGTGGTGGTGGTGATACACGCCTTTAATCCCAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTGGCCAGGGTGGTGGTGGTGATACACGCCTTTAATCCCAGCAT  442

seq1  TCCCAGAGGCAAAAGCAGGCAGATCTCAGACCAGCCTGGTCTACAAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGGCAAAAGCAGGCAGATCTCAGACCAGCCTGGTCTACAAAGGT  492

seq1  AGTTCTAGAACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGAACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAGGAAAC  542

seq1  AAAACAAACAACAACAACAAACAAAAACAAAGGAAATGGGATTCTGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAACAACAACAAACAAAAACAAAGGAAATGGGATTCTGGCCA  592

seq1  GTGGTGGAAGAGTTGTCTGTTTTCTTGCAGGTTTATGGACGGTAAAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGAAGAGTTGTCTGTTTTCTTGCAGGTTTATGGACGGTAAAGCTC  642

seq1  AGTTTGCAGCTCTGAGATGCAGAAAAGAGCCTGATTCTTTGACCTCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCAGCTCTGAGATGCAGAAAAGAGCCTGATTCTTTGACCTCATCT  692

seq1  TCTCCTTTCTTACCTTGCTGTGCTGGGTTCTGGGCCCCTCTTCCTCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTCTTACCTTGCTGTGCTGGGTTCTGGGCCCCTCTTCCTCTGTG  742

seq1  GGGTCGATCCTCCCCAGAATCCTTCTTCAGTCCTGCTTGCCATCCGTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCGATCCTCCCCAGAATCCTTCTTCAGTCCTGCTTGCCATCCGTGCC  792

seq1  TTGTCCTCTGCTCAGCTGCTGCATCTTAGTGCTCTCTGGTGGGAGCCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTGCTCAGCTGCTGCATCTTAGTGCTCTCTGGTGGGAGCCATG  842

seq1  GGGTGGGGGTTACTTGTGGTTTTCATTAGAAATGATTCCCCCATAGCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGGTTACTTGTGGTTTTCATTAGAAATGATTCCCCCATAGCAGT  892

seq1  TAAATCATACCTTTCACTCTTGATACTGTAGTATCGACTCAGTCTTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATACCTTTCACTCTTGATACTGTAGTATCGACTCAGTCTTGCTG  942

seq1  GAAGTGCTTTGTTCTGTAATCACAGACTTCATTTCCTTGAGCCTCAGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTTTGTTCTGTAATCACAGACTTCATTTCCTTGAGCCTCAGTTT  992

seq1  GTTCACTTGTGAAACTGCAGCAGCAGCTGTGATGATGGTGATGGTGGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTGTGAAACTGCAGCAGCAGCTGTGATGATGGTGATGGTGGTGA  1042

seq1  TGGTGATGATGGTGATGATGGTGGTGATGATGATGATGGTGATGGTGAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATGATGGTGATGATGGTGGTGATGATGATGATGGTGATGGTGAAG  1092

seq1  AATTC  1105
      |||||
seq2  AATTC  1097