BAC Information

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BAC

Clone NameB6Ng01-311I17
Chromosome4 (Build37)
Map Location 114,450,314 - 114,450,884
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC242627, LOC100040625, A630098G03Rik, LOC666048
Downstream geneFoxd2, LOC100040736, Foxe3, Cmpk, Stil, Tal1, Pdzk1ip1, Cyp4x1, Cyp4a21-ps, LOC384042, LOC230639, Cyp4a12, LOC546842, Cyp4a12b, LOC435802, LOC666393, LOC230641, Cyp4a14, Cyp4a10, LOC666168, LOC631037, LOC100040843, Cyp4b1, LOC546843, 4732418C07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311I17.bB6Ng01-311I17.g
ACCGA103236GA103237
length1,161565
definitionB6Ng01-311I17.b B6Ng01-311I17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatactcaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgagagctagagaagtagccaagagctaaagggatctgcaccctatagt
gacacatatgagctacagtaccccggagctctgactctagctgcataatt
atcaaagatgctagtcgcatcactgaaaagagagtcaatgacttgcaact
taatgccagtacaggaatgcagtcaatggtgagaatggcagcaatggtgt
gtctatctcga
agcttcctggtagacttttggttaacattcctttggtgagggggtgcaga
agatctggttttttttcagcaggaggaaggcctccccctgctcagctggg
gcctatttacaccatctctcggaatttaccgtctgaaaaatgggacgata
atgcttcacgccctgggggtgttagtgtctgagaagtgctaagttcagct
gttggctcagagctgggactcattaaatggtagctgctattattactatt
gattatattaacagcagccacaagcaggcgcagagcacggcaggaaggcc
tcggcctgttgtcttcattgtttcttgatgaggaaatttcgtgggagtcg
gctgttccagaattaagattccttctctctgctagtccatgtgctgtgtt
tgtctccttgtagcagcccctctgccagcctcagcagcctgcctttacca
gcccagctacaccgttcagccctgctgctggaggcagacatctgccagga
aagccgaccaccttcccagattttctgtttgcagatgcatgggcagggga
tgggggttgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_114450314_114450884
seq2: B6Ng01-311I17.g_67_637 (reverse)

seq1  CACCCCCAACCCCCATCCCCTGCCCATGCATCTGCAAACAGAAAATCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAACCCCCATCCCCTGCCCATGCATCTGCAAACAGAAAATCTGG  50

seq1  GAAGGTGGTCGGCTTTCCTGGCAGATGTCTGCCTCCAGCAGCAGGGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGTCGGCTTTCCTGGCAGATGTCTGCCTCCAGCAGCAGGGCTGA  100

seq1  ACGGTGTAGCTGGGCTGGTAAAGGCAGGCTGCTGAGGCTGGCAGAGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGTAGCTGGGCTGGTAAAGGCAGGCTGCTGAGGCTGGCAGAGGGGC  150

seq1  TGCTACAAGGAGACAAACACAGCACATGGACTAGCAGAGAGAAGGAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAAGGAGACAAACACAGCACATGGACTAGCAGAGAGAAGGAATCT  200

seq1  TAATTCTGGAACAGCCGACTCCCACGAAATTTCCTCATCAAGAAACAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGGAACAGCCGACTCCCACGAAATTTCCTCATCAAGAAACAATG  250

seq1  AAGACAACAGGCCGAGGCCTTCCTGCCGTGCTCTGCGCCTGCTTGTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACAGGCCGAGGCCTTCCTGCCGTGCTCTGCGCCTGCTTGTGGCT  300

seq1  GCTGTTAATATAATCAATAGTAATAATAGCAGCTACCATTTAATGAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAATATAATCAATAGTAATAATAGCAGCTACCATTTAATGAGTCC  350

seq1  CAGCTCTGAGCCAACAGCTGAACTTAGCACTTCTCAGACACTAACACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGAGCCAACAGCTGAACTTAGCACTTCTCAGACACTAACACCCC  400

seq1  CAGGGCGTGAAGCATTATCGTCCCATTTTTCAGACGGTAAATTCCGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCGTGAAGCATTATCGTCCCATTTTTCAGACGGTAAATTCCGAGAG  450

seq1  ATGGTGTAAATAGGCCCCAGCTGAGCAGGGGGAGGCCTTCCTCCTGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTAAATAGGCCCCAGCTGAGCAGGGGGAGGCCTTCCTCCTGCTGA  500

seq1  AAAAAAACCAGATCTTCTGCACCCCCTCACCAAAGGAATGTTAACCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCAGATCTTCTGCACCCCCTCACCAAAGGAATGTTAACCAAAA  550

seq1  GTCTACCAGGAAGCTGAATTC  571
      |||||||||||||||||||||
seq2  GTCTACCAGGAAGCTGAATTC  571