BAC Information

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BAC

Clone NameB6Ng01-311J01
Chromosome4 (Build37)
Map Location 10,663,682 - 10,664,213
singlet/doubletsinglet
Overlap genenone
Upstream geneGdf6, 4930448K20Rik, LOC666840
Downstream gene1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311J01.bB6Ng01-311J01.g
ACCGA103252GA103253
length9441,131
definitionB6Ng01-311J01.b B6Ng01-311J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcttggaggattttacctttgatgagtatgaagtgtccctcct
tgtcttttttgacaactttgggttggaagtcgattttatccgatattaga
atggctactccagcctgtttcttctgaccatttgcttggaaaattatttt
ccagcctttcactctgaggtagtgtctgtctttttccctgagatgggttt
cctgtaagccgcagaatgttgggtcctgtttgtgtagccagtgtgttagt
ctatgtctttttattggggaattgagtccattgatattaagagatattaa
ggaaaggtaattgttgcttcctgttatttttgttgttaaagttggcattc
tgttcttgtggctgtcttcttttaggtttgttgagggattatcttcttgt
tttttctagggcgtggttcccgtccttgtattggtttttttctgttatta
tactttgaagggctggattcgtggtgagataatgggtgaatttagttttg
tcgtggaatactttggtttctccatctatggtaataaaaaacaagagatg
ctgactaccagctgctggtcacatcaccccagtcatccactccacatatt
ttagaaaatgacatcacaacatctccaaccttcagctcctagctgcaaac
tcttctcttcaaatatttcttgaagtttgtgctcatcttactccagacca
acttcctgagagcccctcatcgtgtgatttgggagtaattccaattctgg
ctgggagtgggctaggttgggagccaaacactagtgcaaactgagcgtcc
agacaataaatcagccacaggtttccgcacacatcgtcaggagggttaga
gctcagctgctctgaacataagaatcgtttatattagtctgtagttgcca
taacatctcacacagggtccttgcttttctcctgggttttacac
gaattcctgacctttccaaaacttttttaatgaaggggtgtttgattttg
tcaaatgctttctcaacatctaaggagatgatcatgtggtttttgtcttt
gagtttctttatatagtggattacattgatggatttccatatattaaacc
attcctccatccctgggatgaagcctagttggtcatgatagatgatcgtt
ttgatgtgtttttggattcggtttgcgaggattttattgagtatttttgc
atcgatattcataagggaaattgatctgaaggtctctttctttgttggat
ctttgtgtagtttaggtatcagagtaattgtgacttcatagaatgaattg
ggtagggtacgttctgtttctattttgtggaacagtttgagaagagctgg
aattaggtcttctttaaatttctgatagaactcttcactaaaaccatctg
gacctgggctttttttttttgttgggagactattgatgactgctttcatt
tctttaggggaaatgggactgtttaagtcattaatctgatcctgatttaa
ctttgataactgatatctgtctcggaagttgtccacttcatccaggtttt
ctagttgtgctgagtatagccttttgtagtaggatctgatgatttcctca
ggttctcttgttatgtctcctttgtcatttttgattttgttaattagaat
actgaccctgtgccctctagttagtctggccaagggtttatctatcttgt
tgattttctcaaagaaccagctcttggtttggttgattctttgaatagtt
ctttttgtttccacttgggttaattttcagccctgagtttgattattttc
ctgccatctactccctcttggatgaatttgcttcctttagttctagagct
tctaggtgtgctgtcagtctgctagtgtatgctctctctagtttctttat
gggaggcactcaggggtatgagttttcctcttaggaattgccttcatgtg
tcccggtaaattcggctatgtgttgctccatttttcagtaaccttctaaa
aagtacttgatcccttcgttagtccaactcttgacccaaagattcaatga
agaagagtgttttcacggttccagctgacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10663682_10664213
seq2: B6Ng01-311J01.b_48_579 (reverse)

seq1  ATTACCATAGATGGAGAAACCAAAGTATTCCACGACAAAACTAAATTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCATAGATGGAGAAACCAAAGTATTCCACGACAAAACTAAATTCAC  50

seq1  CCATTATCTCTCCACGAATCCAGCCCTTCAAAGGATAATAACAGAAAAAA  100
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CCATTATCTCACCACGAATCCAGCCCTTCAAAGTATAATAACAGAAAAAA  100

seq1  ACCAATACAAGGACGGGAACCACGCCCTAGAAAAAACAAGAAGATAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACAAGGACGGGAACCACGCCCTAGAAAAAACAAGAAGATAATCC  150

seq1  CTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAA  200

seq1  CAACAAAAATAACAGGAAGCAACAATTACCTTTCCTTAATATCTCTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAATAACAGGAAGCAACAATTACCTTTCCTTAATATCTCTTAAT  250

seq1  ATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCT  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACACACTGGCT  300

seq1  ACACAAACAGGAACCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGG  350
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  ACACAAACAGGACCCAACATTCTGCGGCTTACAGGAAACCCATCTCAGGG  350

seq1  AAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAACAATTTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAATAATTTTCCAA  400

seq1  GCAAATGGTCTGAAGAAACAGGCTGGAGTAGCCATTCTAATATCGGATAA  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGTCAGAAGAAACAGGCTGGAGTAGCCATTCTAATATCGGATAA  450

seq1  AATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGACACTTCA  500
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATCGACTTCCAACCCAAAGTTGTCAAAAAAGACAAGGAGGGACACTTCA  500

seq1  TACTCATCAAAGGTAAAATCCTCCAAGAGGAA  532
      ||||||||||||||||||||||||||||||||
seq2  TACTCATCAAAGGTAAAATCCTCCAAGAGGAA  532