BAC Information

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BAC

Clone NameB6Ng01-312N13
Chromosome4 (Build37)
Map Location 63,976,131 - 64,092,801
singlet/doubletdoublet
Overlap genenone
Upstream geneCol27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312N13.bB6Ng01-312N13.g
ACCGA104215GA104216
length1,0101,152
definitionB6Ng01-312N13.b B6Ng01-312N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,092,196 - 64,092,801)(63,976,131 - 63,977,199)
sequence
gaattccagcacatactgtccatcagattctcgatgctcctgttttcata
agacagtgccaattcagtcactgagatacaatcccaatgcctgggaaaaa
tggtaacatgaggtcaattctattatcttactactgctagtgtaaaactg
actgtgaacatgatagagtttgagtggcttatgacaatacaagcactgat
cgtactgttctgggtatcagaagactgaagtggaaacacaagcctaaagt
caaggtgtgtgctgagctgtgatccttttggagagtctacatcctttcca
tgtttaacttctgagggatgttcttattccttggcccaagtgtcttttca
ttttcaaggccaacagcagagctcttcagagattttcagatttctgtgac
ttgtctctgctattcctcatttccttcactctctgggaaaccctctcaca
aaggctcccgtggttatcttggggcatgccatatgatctgcagtgatctc
ctccaccagaatttttgaccttaatcccatctgcaaagtcccttctgccc
agtaaggtagcacactcacagctgatggggatgagatcctacacacacgt
gaaaacattactctgctacctacactccacaccttggcgccactcttgtt
ctgtcatgattttccacccatgacatttacattcccagggggcaaaaagg
acttatccaaacatcatattaagatattagaccaattttactctggtttc
catctgtaatggactctgatcctgaaaggcatcggagatcctttcctgaa
atctgtttaaggaacaaatgaacctcaatctggaggtgttaggacatgcc
tgtaactccaggtcttggtagggagaggtaagaaaataagaagtacaaag
acaagatagatatggtgatacacacgtttaacagaagtactggaaacata
taagcaggaggatctgtaagttcaatgccagcctggtctacagacatgtt
ctaggatacc
gaattcttttttttttaatccactgagtcctctttgttactagttactag
ttactttgttaccagtattcacatgtgtatagcatgacacactgaagcat
gggtaagccttccaggggacatacctctgacaaaaactgactgccactcc
cagtagccatcatcccaaaagcttctcagatggggtgggacttcatgact
tccttcactatctactctcagactttgactagatttatcttgtgcaggtc
ttttgcattcagacacagcttctgtaagttcacatgtgcaaaacagcctt
ctcaagtctagaatacactctcatctattttgcctgactcaagcaatcat
tctaaccccccttcaatgataattcctggaagatagggttttggtataga
tatattatttagggttgagtgtgcttcagatctatcaacatattgatctg
ccgtaggtccctgcattaagtaacatatattgcaaaaagaagcttctttg
atgagagttgcaagaaatgctattatataaggaaaaaatagatttttatg
gggttgtttaatactcactttcctaggacccttctgtcctgtgaaggtgg
ctttaaatgcaatcataaaacagttggtgccattattgtacaagtggtct
gatctttccaagccagcttttgtcatagtttacagattcacagctggtta
aaactgttgatgacatttctcttctagtagtcactgttaattgtctttgg
tatttgattttggtgatggaaaactcacaaacatgcatctcttaacagtg
aaacaagaataacagtctataattcccttcaggctgtgggaggaagtgaa
gtagagttttataagacacttaataaagcacctgcacgatgcctgctttt
actgagcagagacagcaagaactgggagatttcgggttgggaatctttac
tgctgtattcctgttgcctcatgtaggaaatggtgaacagccaccttaaa
tggcccaccagaccattcccataaagcctcctcatcttccattccatttg
gttggcctccatgtaacattgtttcttagtggagagccaaaggacaatgt
ccccatttattttcccttagacttaatgtatcccttcctaggccaaaatc
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64092196_64092801
seq2: B6Ng01-312N13.b_48_653 (reverse)

seq1  GTTTTCACGTGTGTGTAGGATCTCATCCCCATCAGCTGTGAGTGTGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCACGTGTGTGTAGGATCTCATCCCCATCAGCTGTGAGTGTGCTAC  50

seq1  CTTACTGGGCAGAAGGGACTTTGCAGATGGGATTAAGGTCAAAAATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGGGCAGAAGGGACTTTGCAGATGGGATTAAGGTCAAAAATTCTG  100

seq1  GTGGAGGAGATCACTGCAGATCATATGGCATGCCCCAAGATAACCACGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGAGATCACTGCAGATCATATGGCATGCCCCAAGATAACCACGGG  150

seq1  AGCCTTTGTGAGAGGGTTTCCCAGAGAGTGAAGGAAATGAGGAATAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGTGAGAGGGTTTCCCAGAGAGTGAAGGAAATGAGGAATAGCAG  200

seq1  AGACAAGTCACAGAAATCTGAAAATCTCTGAAGAGCTCTGCTGTTGGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTCACAGAAATCTGAAAATCTCTGAAGAGCTCTGCTGTTGGCCT  250

seq1  TGAAAATGAAAAGACACTTGGGCCAAGGAATAAGAACATCCCTCAGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAAAAGACACTTGGGCCAAGGAATAAGAACATCCCTCAGAAGT  300

seq1  TAAACATGGAAAGGATGTAGACTCTCCAAAAGGATCACAGCTCAGCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGGAAAGGATGTAGACTCTCCAAAAGGATCACAGCTCAGCACAC  350

seq1  ACCTTGACTTTAGGCTTGTGTTTCCACTTCAGTCTTCTGATACCCAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGACTTTAGGCTTGTGTTTCCACTTCAGTCTTCTGATACCCAGAAC  400

seq1  AGTACGATCAGTGCTTGTATTGTCATAAGCCACTCAAACTCTATCATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGATCAGTGCTTGTATTGTCATAAGCCACTCAAACTCTATCATGTT  450

seq1  CACAGTCAGTTTTACACTAGCAGTAGTAAGATAATAGAATTGACCTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAGTTTTACACTAGCAGTAGTAAGATAATAGAATTGACCTCATG  500

seq1  TTACCATTTTTCCCAGGCATTGGGATTGTATCTCAGTGACTGAATTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATTTTTCCCAGGCATTGGGATTGTATCTCAGTGACTGAATTGGCA  550

seq1  CTGTCTTATGAAAACAGGAGCATCGAGAATCTGATGGACAGTATGTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTATGAAAACAGGAGCATCGAGAATCTGATGGACAGTATGTGCTG  600

seq1  GAATTC  606
      ||||||
seq2  GAATTC  606

seq1: chr4_63976131_63977199
seq2: B6Ng01-312N13.g_134_1218

seq1  TTCACATGTGTATAGCATGACACACTGAAGCATGGGTAAGCCTTCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGTGTATAGCATGACACACTGAAGCATGGGTAAGCCTTCCAGGG  50

seq1  GACATACCTCTGACAAAAACTGACTGCCACTCCCAGTAGCCATCATCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACCTCTGACAAAAACTGACTGCCACTCCCAGTAGCCATCATCCCA  100

seq1  AAAGCTTCTCAGATGGGGTGGGACTTCATGACTTCCTTCACTATCTACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTCAGATGGGGTGGGACTTCATGACTTCCTTCACTATCTACTC  150

seq1  TCAGACTTTGACTAGATTTATCTTGTGCAGGTCTTTTGCATTCAGACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTTGACTAGATTTATCTTGTGCAGGTCTTTTGCATTCAGACACA  200

seq1  GCTTCTGTAAGTTCACATGTGCAAAACAGCCTTCTCAAGTCTAGAATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTAAGTTCACATGTGCAAAACAGCCTTCTCAAGTCTAGAATACA  250

seq1  CTCTCATCTATTTTGCCTGACTCAAGCAATCATTCTAACCCCCCTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTATTTTGCCTGACTCAAGCAATCATTCTAACCCCCCTTCAAT  300

seq1  GATAATTCCTGGAAGATAGGGTTTTGGTATAGATATATTATTTAGGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCCTGGAAGATAGGGTTTTGGTATAGATATATTATTTAGGGTTG  350

seq1  AGTGTGCTTCAGATCTATCAACATATTGATCTGCCGTAGGTCCCTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTTCAGATCTATCAACATATTGATCTGCCGTAGGTCCCTGCATT  400

seq1  AAGTAACATATATTGCAAAAAGAAGCTTCTTTGATGAGAGTTGCAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACATATATTGCAAAAAGAAGCTTCTTTGATGAGAGTTGCAAGAAA  450

seq1  TGCTATTATATAAGGAAAAAATAGATTTTTATGGGGTTGTTTAATACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTATATAAGGAAAAAATAGATTTTTATGGGGTTGTTTAATACTCA  500

seq1  CTTTCCTAGGACCCTTCTGTCCTGTGAAGGTGGCTTTAAATGCAATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTAGGACCCTTCTGTCCTGTGAAGGTGGCTTTAAATGCAATCATA  550

seq1  AAACAGTTGGTGCCATTATTGTACAAGTGGTCTGATCTTTCCAAGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTGGTGCCATTATTGTACAAGTGGTCTGATCTTTCCAAGCCAGC  600

seq1  TTTTGTCATAGTTTACAGATTCACAGCTGGTTAAAACTGTTGATGACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCATAGTTTACAGATTCACAGCTGGTTAAAACTGTTGATGACATT  650

seq1  TCTCTTCTAGTAGTCACTGTTAATTGTCTTTGGTATTTGATTTTGGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTAGTAGTCACTGTTAATTGTCTTTGGTATTTGATTTTGGTGAT  700

seq1  GGAAAACTCACAAACATGCATCTCTTAACAGTGAAACAAGAATAACAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTCACAAACATGCATCTCTTAACAGTGAAACAAGAATAACAGTC  750

seq1  TATAATT-CCTTCAGGCTGTGGGAGGAAGTGAAGTAGAG-TTTATAAGAC  798
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  TATAATTCCCTTCAGGCTGTGGGAGGAAGTGAAGTAGAGTTTTATAAGAC  800

seq1  ACTTAATAAAGCACCTGCACGATGCCTGCTTTTACTGAGCAGAGACAGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAAGCACCTGCACGATGCCTGCTTTTACTGAGCAGAGACAGCA  850

seq1  AGAACT-GGAGATTTCGGGTT-GGAATCTTTACTGCTGTATT-CTGT--G  893
      |||||| |||||||||||||| |||||||||||||||||||| ||||   
seq2  AGAACTGGGAGATTTCGGGTTGGGAATCTTTACTGCTGTATTCCTGTTGC  900

seq1  CTCATGTAGGAAATGGTGAACAGCCA-CTTAAATGG-GCACCAGAACATT  941
      |||||||||||||||||||||||||| |||||||||  ||||||| ||||
seq2  CTCATGTAGGAAATGGTGAACAGCCACCTTAAATGGCCCACCAGACCATT  950

seq1  -CAATAAAGC--TCTCATCTT-CATTCCATTTGGTTGGCTTCAATGTAAC  987
       | |||||||   |||||||| ||||||||||||||||| || |||||||
seq2  CCCATAAAGCCTCCTCATCTTCCATTCCATTTGGTTGGCCTCCATGTAAC  1000

seq1  AATTGTTTCTTAGTGGAGAG-CAAAGACAAATGTCCCCA-TTATTTTCCC  1035
       ||||||||||||||||||| |||||   |||||||||| ||||||||||
seq2  -ATTGTTTCTTAGTGGAGAGCCAAAGGACAATGTCCCCATTTATTTTCCC  1049

seq1  CTAGACTAAATG-AT-CCTTCTTAGGCAAAAATCTC  1069
       |||||| |||| || ||||| ||||| ||||||||
seq2  TTAGACTTAATGTATCCCTTCCTAGGCCAAAATCTC  1085