BAC Information

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BAC

Clone NameB6Ng01-313F14
Chromosome4 (Build37)
Map Location 150,600,192 - 150,786,000
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313F14.bB6Ng01-313F14.g
ACCGA104590GA104591
length1,210465
definitionB6Ng01-313F14.b B6Ng01-313F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,784,789 - 150,786,000)(150,600,192 - 150,600,661)
sequence
gaattctcccacttgtttatggtctgggcaatttgcctcccgctaccgtg
tgactcagaactatttccaatacccggagcctgcagctccccagagtcaa
cagctggtgtgggtgggtctcatttgcctggaatcttccaccaaagccct
ccacctccgtctcctccctggctgccttaagcagcagtgccctgctccaa
aatggaacaggagcctggttctcagaccaggcagagggaggccctaggat
gtccccatcctgctggcttcgaacacttctttattattttctcattttgc
ttttatgcctcctttggatcagggcagaccctggttttattgtgggggct
ctacagggggtaaataacagaaaataatggacatgaatttaatcctgggg
tcttaggaggaaccccgtggtgccatgtggtgaagggttcccagacgcct
ccgcgccgctcactttacagagaacttaagatcattgggacttggactga
ctgttgttcttgtatctccagtcatcataatgtggaatgaagaaaaaaaa
aaaaagtctgttatgcatttactttagaatgaggcagccactgtgtgatt
tccatttgagtttgcattctcttttaaagactctcttcacaataaagcta
gagactgcacgccccgtgactcccaggctcccttctggaagcagcttcac
cagagactcacatgactaaagctggcttccatcctccaggcctggaggga
gccacatggtctctccttcctttcttcttcctttgctcctagtccaccct
gctctggctgctcaaccccacagaacccttcgacattgaatgcatcagca
aatcagtacctctaactacaataatagtttatagcatcggacccgaagca
gcgaaagattgtgaacgattagccgacagtaagaggagacaagtggactg
gggttctgtcatcggtggggtgacatgttcatgctctcttggtcaagtga
ttcccaagcaactttatttgactagacgcgtgcactcaaagtaaatatta
ttccattatgcataactttaattatcatgacagccagtcataaagtcctc
tgctagaaaatcgcttttaattgccgtatctaagatggaataccggccca
cattggattcaagcggcattacccacttattcttttatgccgagcacatg
tgtttaaatg
tcctccaggaggggaacctgagcactgcccttcatctccccagtgctgga
ttgaggaggaaacactcatagaatgtaggtgtagccacagagttgcctca
ttgaaggcacgatgatcttaggggcaggctctgggcccctccctcccaag
gctgtgagtgttcacctgtcatggagggccttggtcaatggaatcacctt
gctcagtgcctgcgtcctcctccccccccccccaaaataaactgatctgc
ggcctgaacaggtccactgagctccaaactttgccccctgtgaaaatctg
aagcatgcagctgggctggctgccccctccgctccctgatcctttaatct
gagactattaaaacttcattccacttctattggtaaaccatccatcactc
tcaccaagcagcgcagggctgtgggagcccagcgggagggcggcaggcag
agggaggggtaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150784789_150786000
seq2: B6Ng01-313F14.b_46_1255 (reverse)

seq1  CATTTA---ACATGGGCTC-GCAT-AAAGAAT-AGTGGGTAATTGCCGCT  44
      ||||||   ||||| |||| |||| ||||||| ||||||||| |||||||
seq2  CATTTAAACACATGTGCTCGGCATAAAAGAATAAGTGGGTAA-TGCCGCT  49

seq1  TGAATCCAATGTGTG-CTGTATCTCATCTATGATACGCAATTTAAAAGCG  93
      ||||||||||||| | | ||||  |||||  ||||||  | |||||||||
seq2  TGAATCCAATGTGGGCCGGTATTCCATCTTAGATACGGCAATTAAAAGCG  99

seq1  ATATTCTAGCAAGAGGACTTTATGACTTGCTGTCATGATAAATAAAAGTT  143
      || ||||||| |||||||||||||||| ||||||||||||| ||||   |
seq2  ATTTTCTAGC-AGAGGACTTTATGACTGGCTGTCATGATAATTAAA--GT  146

seq1  TATGGCATAATGGAATTAATATTTACTTTGAGTGCAACGCGGTCTAGTCA  193
      ||| ||||||||||| ||||||||||||||||||| |||| |||||||||
seq2  TAT-GCATAATGGAA-TAATATTTACTTTGAGTGC-ACGC-GTCTAGTCA  192

seq1  AATAAAGTTGCTTGGGAATCACTTTGGACCAAGAGAGCATGAACATGTCA  243
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  AATAAAGTTGCTTGGGAATCACTT--GACCAAGAGAGCATGAACATGTCA  240

seq1  -CCCACCGATGACAGAACCCCAGTCCACTTGTCTCCTCTTACTGTCGGCT  292
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCGATGACAGAACCCCAGTCCACTTGTCTCCTCTTACTGTCGGCT  290

seq1  AATCGTTCACAATCTTTCGCTGCTTCGGGTCCGATGCTATAAACTATTAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTTCACAATCTTTCGCTGCTTCGGGTCCGATGCTATAAACTATTAT  340

seq1  TGTAGTTAGAGGTACTGATTTGCTGATGCATTCAATGTCGAAGGGTTCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTAGAGGTACTGATTTGCTGATGCATTCAATGTCGAAGGGTTCTG  390

seq1  TGGGGTTGAGCAGCCAGAGCAGGGTGGACTAGGAGCAAAGGAAGAAGAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTGAGCAGCCAGAGCAGGGTGGACTAGGAGCAAAGGAAGAAGAAA  440

seq1  GGAAGGAGAGACCATGTGGCTCCCTCCAGGCCTGGAGGATGGAAGCCAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGAGACCATGTGGCTCCCTCCAGGCCTGGAGGATGGAAGCCAGC  490

seq1  TTTAGTCATGTGAGTCTCTGGTGAAGCTGCTTCCAGAAGGGAGCCTGGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCATGTGAGTCTCTGGTGAAGCTGCTTCCAGAAGGGAGCCTGGGA  540

seq1  GTCACGGGGCGTGCAGTCTCTAGCTTTATTGTGAAGAGAGTCTTTAAAAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGGGGCGTGCAGTCTCTAGCTTTATTGTGAAGAGAGTCTTTAAAAG  590

seq1  AGAATGCAAACTCAAATGGAAATCACACAGTGGCTGCCTCATTCTAAAGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCAAACTCAAATGGAAATCACACAGTGGCTGCCTCATTCTAAAGT  640

seq1  AAATGCATAACAGACTTTTTTTTTTTTTCTTCATTCCACATTATGATGAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATAACAGACTTTTTTTTTTTTTCTTCATTCCACATTATGATGAC  690

seq1  TGGAGATACAAGAACAACAGTCAGTCCAAGTCCCAATGATCTTAAGTTCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATACAAGAACAACAGTCAGTCCAAGTCCCAATGATCTTAAGTTCT  740

seq1  CTGTAAAGTGAGCGGCGCGGAGGCGTCTGGGAACCCTTCACCACATGGCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGTGAGCGGCGCGGAGGCGTCTGGGAACCCTTCACCACATGGCA  790

seq1  CCACGGGGTTCCTCCTAAGACCCCAGGATTAAATTCATGTCCATTATTTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGGGTTCCTCCTAAGACCCCAGGATTAAATTCATGTCCATTATTTT  840

seq1  CTGTTATTTACCCCCTGTAGAGCCCCCACAATAAAACCAGGGTCTGCCCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATTTACCCCCTGTAGAGCCCCCACAATAAAACCAGGGTCTGCCCT  890

seq1  GATCCAAAGGAGGCATAAAAGCAAAATGAGAAAATAATAAAGAAGTGTTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAAGGAGGCATAAAAGCAAAATGAGAAAATAATAAAGAAGTGTTC  940

seq1  GAAGCCAGCAGGATGGGGACATCCTAGGGCCTCCCTCTGCCTGGTCTGAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGCAGGATGGGGACATCCTAGGGCCTCCCTCTGCCTGGTCTGAG  990

seq1  AACCAGGCTCCTGTTCCATTTTGGAGCAGGGCACTGCTGCTTAAGGCAGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGCTCCTGTTCCATTTTGGAGCAGGGCACTGCTGCTTAAGGCAGC  1040

seq1  CAGGGAGGAGACGGAGGTGGAGGGCTTTGGTGGAAGATTCCAGGCAAATG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGAGACGGAGGTGGAGGGCTTTGGTGGAAGATTCCAGGCAAATG  1090

seq1  AGACCCACCCACACCAGCTGTTGACTCTGGGGAGCTGCAGGCTCCGGGTA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACCCACACCAGCTGTTGACTCTGGGGAGCTGCAGGCTCCGGGTA  1140

seq1  TTGGAAATAGTTCTGAGTCACACGGTAGCGGGAGGCAAATTGCCCAGACC  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATAGTTCTGAGTCACACGGTAGCGGGAGGCAAATTGCCCAGACC  1190

seq1  ATAAACAAGTGGGAGAATTC  1212
      ||||||||||||||||||||
seq2  ATAAACAAGTGGGAGAATTC  1210

seq1: chr4_150600192_150600661
seq2: B6Ng01-313F14.g_70_540

seq1  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50

seq1  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100

seq1  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150

seq1  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200

seq1  CACCTTGCTCAGTGCCTGCGTCCTCCT-CCCCCCCCCCCAAAATAAACTG  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACCTTGCTCAGTGCCTGCGTCCTCCTCCCCCCCCCCCCAAAATAAACTG  250

seq1  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  300

seq1  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  350

seq1  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  400

seq1  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  450

seq1  AGGCAGAGGGAGGGGTAGGCA  470
      |||||||||||||||||||||
seq2  AGGCAGAGGGAGGGGTAGGCA  471