BAC Information

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BAC

Clone NameB6Ng01-313G18
Chromosome4 (Build37)
Map Location 146,134,461 - 146,135,585
singlet/doubletsinglet
Overlap geneOTTMUSG00000010694
Upstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
Downstream geneLOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313G18.bB6Ng01-313G18.g
ACCGA104640GA104641
length1,1311,189
definitionB6Ng01-313G18.b B6Ng01-313G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgaacatggtgatactattgctgaagaaagttgtcatgac
catgattgtgaggagccgcccttgcagtcaccattacaagatagtgctga
cattcggtgttctaactggtaaacaagtagtctgcgcatgtgctggggta
tttttccattccttgtgccctgcctgtcccatggcgtcatctgggctgat
ggtgagcagccaatcagggcaaggcacgtctccaaccgctcttcgtggtc
tataaaaggaccgattttccggtgctctgggtctcctcctccccagaagc
tgatcatctatctctcgagatgcattaaagctttgctgcagaaggatccg
agtttgtcctgtgtgtgtgttcttgccggcaagattcagagacacaggga
cacatgatatcagcaaatattcagtgctttttatgtatttctttgacctt
atatttctctcatgtcagatatttctcttggcatttaacaggtatatgaa
tgatctctttcaacgccctggcctcagaagtatggattgacaatgagaaa
aagcagattatcaagtaccatggaatgtcagaaaatgaatgagaattgac
gagggaaatattgatttcctaggaacaataaacactaggccagggaataa
tcaagtgcagaaacccagaccctcagtgttccttctaacactttctcagg
aataatcaaatgctgcaccaaattcacaaatttcttctgaaaaatcccac
aaaaaaaatgcccagaaaacagtgcagaacacagaaagtaagggaatatg
gtacagccatcacacaaagctgaccttacctgggtccaaaagcaaatgac
cacaaaaacatgcacacagaaaataataaaagtatgggtgctacagggca
acttttaaaaagtttctctctaatagatgcagaaagtaaactcaacttga
tttcatgacagagattcaaaactgttttagcaagtacaaaccaaacaact
cagacataaactatgtatcatcagtgggagaaagctccactgatagatat
atatcaatattatcttatgaaagcctagggcaaaatattccacagtggat
caactatgaaagctcctgaagaatgttggaa
gaattccattaatccacctacttatttctttctataccagtaccatacaa
atttttattactatttctctgccatacatctttaagttacagaaattgat
agctccagattttttttttgttgttcaagaatattttatctatcctgtgg
tttttgttttgtttactgttccatacaacgttgagaatatttctttcaag
atctgtgaagatttgtgctaaatttttgataagaattgtactgagtgtct
agattgctttttggtaagatggacatattcattatgttaatcctattgat
acatgaacaagggagatcttttcatgttctgatatcttcctgtttctttc
ttaagatactttaagttcttctcctacaggttttcacttgcttgtttaga
ggtaactgaaggtattttattttgtttgtggctaaagtggagggttctgt
ttccataacttctttttcaacccttttaatcaattgtgtgtagcagggct
aaggctttctttaagtcaattgtgtatgcagacactttgctaaaatgttt
atcaactgtaattttttggtagaattttttgtctcacttatatacattat
cataatatctgaatttcttcttttccaaattgtattcccttgatctctta
agctgctttattgcttgagctaatacttccagtactatatcaaagagatg
aggggatagtggacagctttttcttgttcctgattttaatggaaatgctt
aaaatttctctctatttaatttgattttgggtgatagattgctgaacatt
gcctatattttgtttaggtataccccttgcattctgtccctccaaacgta
tcctaaaggggggttgaattttccaaatacctttttggcatttggtgaga
tatttatgtgggcttatcttcactttttttcctatggtgcattattgtga
tgcctatcctggttgtcaacttgactaaacctggatgctctaccatccaa
taaatacagaaatacctgtgatcagatctgcggcttagaaacagccttac
atgtgaactagatgagacacttttattcagaatctgagccatgaaggcat
gaatgtttaggcttagtagttgttatggcttattcaggcacttagcaagc
agaactctgtagaattcaggcaggaccgtgaacacgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146134461_146135585
seq2: B6Ng01-313G18.b_45_1175 (reverse)

seq1  TTCC-ACATTCTTCA-GAGCTTTCATAG-TGATCCACTGTG--ATATTTT  45
      |||| |||||||||| |||||||||||| ||||||||||||  |||||||
seq2  TTCCAACATTCTTCAGGAGCTTTCATAGTTGATCCACTGTGGAATATTTT  50

seq1  GCCCTAGGCCTTTCAT-AGAT-ATATTGATATATATCTATCAGT-GAGCT  92
      |||||||| ||||||| |||| |||||||||||||||||||||| |||||
seq2  GCCCTAGG-CTTTCATAAGATAATATTGATATATATCTATCAGTGGAGCT  99

seq1  TTCTCCCACTGATGATACATAGTTTATGTCTTGAGTTGTTTGGTTTGTAC  142
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCTCCCACTGATGATACATAGTTTATGTC-TGAGTTGTTTGGTTTGTAC  148

seq1  TTGCTAAAACAGTTTTGAATCTCTGTCATGAAATCAAGTTGAGTTTACTT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAACAGTTTTGAATCTCTGTCATGAAATCAAGTTGAGTTTACTT  198

seq1  TCTGCATCTATTAGAGAGAAACTTTTTAAAAGTTGCCCTGTAGCACCCAT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCTATTAGAGAGAAACTTTTTAAAAGTTGCCCTGTAGCACCCAT  248

seq1  ACTTTTATTATTTTCTGTGTGCATGTTTTTGTGGTCATTTGCTTTTGGAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATTATTTTCTGTGTGCATGTTTTTGTGGTCATTTGCTTTTGGAC  298

seq1  CCAGGTAAGGTCAGCTTTGTGTGATGGCTGTACCATATTCCCTTACTTTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAAGGTCAGCTTTGTGTGATGGCTGTACCATATTCCCTTACTTTC  348

seq1  TGTGTTCTGCACTGTTTTCTGGGCATTTTTTTTGTGGGATTTTTCAGAAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTGCACTGTTTTCTGGGCATTTTTTTTGTGGGATTTTTCAGAAG  398

seq1  AAATTTGTGAATTTGGTGCAGCATTTGATTATTCCTGAGAAAGTGTTAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTGAATTTGGTGCAGCATTTGATTATTCCTGAGAAAGTGTTAGA  448

seq1  AGGAACACTGAGGGTCTGGGTTTCTGCACTTGATTATTCCCTGGCCTAGT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACACTGAGGGTCTGGGTTTCTGCACTTGATTATTCCCTGGCCTAGT  498

seq1  GTTTATTGTTCCTAGGAAATCAATATTTCCCTCGTCAATTCTCATTCATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGTTCCTAGGAAATCAATATTTCCCTCGTCAATTCTCATTCATT  548

seq1  TTCTGACATTCCATGGTACTTGATAATCTGCTTTTTCTCATTGTCAATCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACATTCCATGGTACTTGATAATCTGCTTTTTCTCATTGTCAATCC  598

seq1  ATACTTCTGAGGCCAGGGCGTTGAAAGAGATCATTCATATACCTGTTAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTGAGGCCAGGGCGTTGAAAGAGATCATTCATATACCTGTTAAA  648

seq1  TGCCAAGAGAAATATCTGACATGAGAGAAATATAAGGTCAAAGAAATACA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGAGAAATATCTGACATGAGAGAAATATAAGGTCAAAGAAATACA  698

seq1  TAAAAAGCACTGAATATTTGCTGATATCATGTGTCCCTGTGTCTCTGAAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCACTGAATATTTGCTGATATCATGTGTCCCTGTGTCTCTGAAT  748

seq1  CTTGCCGGCAAGAACACACACACAGGACAAACTCGGATCCTTCTGCAGCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCGGCAAGAACACACACACAGGACAAACTCGGATCCTTCTGCAGCA  798

seq1  AAGCTTTAATGCATCTCGAGAGATAGATGATCAGCTTCTGGGGAGGAGGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTAATGCATCTCGAGAGATAGATGATCAGCTTCTGGGGAGGAGGA  848

seq1  GACCCAGAGCACCGGAAAATCGGTCCTTTTATAGACCACGAAGAGCGGTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGAGCACCGGAAAATCGGTCCTTTTATAGACCACGAAGAGCGGTT  898

seq1  GGAGACGTGCCTTGCCCTGATTGGCTGCTCACCATCAGCCCAGATGACGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACGTGCCTTGCCCTGATTGGCTGCTCACCATCAGCCCAGATGACGC  948

seq1  CATGGGACAGGCAGGGCACAAGGAATGGAAAAATACCCCAGCACATGCGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACAGGCAGGGCACAAGGAATGGAAAAATACCCCAGCACATGCGC  998

seq1  AGACTACTTGTTTACCAGTTAGAACACCGAATGTCAGCACTATCTTGTAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACTTGTTTACCAGTTAGAACACCGAATGTCAGCACTATCTTGTAA  1048

seq1  TGGTGACTGCAAGGGCGGCTCCTCACAATCATGGTCATGACAACTTTCTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACTGCAAGGGCGGCTCCTCACAATCATGGTCATGACAACTTTCTT  1098

seq1  CAGCAATAGTATCACCATGTTCAGAATGAATTC  1125
      |||||||||||||||||||||||||||||||||
seq2  CAGCAATAGTATCACCATGTTCAGAATGAATTC  1131