BAC Information

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BAC

Clone NameB6Ng01-313L20
Chromosome4 (Build37)
Map Location 147,020,041 - 147,020,569
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618
Downstream geneLOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313L20.bB6Ng01-313L20.g
ACCGA104867GA104868
length4891,199
definitionB6Ng01-313L20.b B6Ng01-313L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgaaagagatggagttccagttgatcttgtcttttccactgggttttatc
aactgagttttctacaaagtggtttcataaaaataagcaaacactgcagg
gcattgacaaaaaaggtgttgctttttacaaactgacaataagtcttcat
tgctaactagcagacttacactagtcactgtgtatgaagaggtcaagctg
gtgcctccaagaatattggctcttatgttccccagtcctcgttatgggaa
gggctttgcaagatacaaaaagtgaaatatatacacagaaccaaccaaaa
agacattgatctaagatttgtccttcctccaaaatatgctaggtcaatga
tgtcatgaatttattggtgaataaccaatcaatatctaatttgacttaaa
tacccaaagcacccttgtgaaaagtttatatgtgtatgtatatatatata
tatatatatatatatatatgtatatatatatatatatat
gaattcatacagtagagaaaatttacaaaaatgcagtgaatgtgataaat
gctttactaataaaggcagactgagaattaatcagataatttatacattt
aaaaaaaaaccttacaagtattttgtatgtgataaatgcagtacccacaa
catcagtctgacaaatcaacaaatatttcaaacagtagagcaacattata
aatgaaatgaatgagataatcctttaacaagaaatatcatcttaaaattc
actggagaattcttccaaaagggaaacttttcaaatacattgatggtttg
aatcctttattttggcctatctcttagaatgtaacagataatttatacag
gcaagaatcttaacaaatataatatatgctgaaatatctttgacttcatt
tcagtgcagaaaaaatatgtaaaatatttttttatgggaaaaaaagttct
cctggggaaatgtggcatatgttttacacgggtaatattcttttcaacag
ttagtgctctaaactagagaattatgaatctgaaaacttttgaaaacctt
catgcaatgttcaaatcttagataatgtcaactattatgctggcagtaac
tctgaatatatgataatgaagaaacattttcattaaacttttacttgttc
accctcaaatattatatgatgaagtcaggtgtgaaagccagaagaatatg
atgttgtgcaacaattcatggagatagaaatgatccattccaaaaggaaa
ctaaataaagagtgtactatcgccttcaaaatgtctaataaaactggcag
cattttgtatattttaattcaaatgaagaaattgacacagattgtacttg
atagtgtatttgacaactgagccaccaagactgcatgttcttaatcctat
aatatgcctacagatgtgaagttgtgctttgagtatccagtattcattat
tcttatcaccgtcaatgtgacaaattgatttattgggtttcacgtttcag
gatagttgactgactatgagtcctttatgctctgtcacatctccttcctc
attgccctgttaaataagctgaaatatttaacaggtgactgctgttttca
ggttgccacttatatagatggattaagtttgcactcatgctgaactattt
cttaaagttattgcctgagttcatggaatattttctctgttaaacctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147020041_147020569
seq2: B6Ng01-313L20.b_49_543

seq1  GAATTCTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCACTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATTCTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCACTGGGT  50

seq1  TTTATCAACTGAGTTGTTCTACAAAGTGGTTTCATAAAAATAAACGAACA  100
      ||||||||||||||| ||||||||||||||||||||||||||| | ||||
seq2  TTTATCAACTGAGTT-TTCTACAAAGTGGTTTCATAAAAATAAGCAAACA  99

seq1  CGGCAGGGCACCGACAACAAAAGGTGTTGCTTTTTACAAACTGACAATAA  150
      | ||||||||  ||||| ||||||||||||||||||||||||||||||||
seq2  CTGCAGGGCATTGACAA-AAAAGGTGTTGCTTTTTACAAACTGACAATAA  148

seq1  GTCTTCATTGCTAACGAGCAGACTTGCACAACTCACTGTGTATAAAGAGG  200
      ||||||||||||||| ||||||||| ||| | ||||||||||| ||||||
seq2  GTCTTCATTGCTAACTAGCAGACTTACACTAGTCACTGTGTATGAAGAGG  198

seq1  TCAAGCTGGTGCCTCCAAGAACATTGGCTCTTACGTTCCACAGTCCTCGT  250
      ||||||||||||||||||||| ||||||||||| ||||| ||||||||||
seq2  TCAAGCTGGTGCCTCCAAGAATATTGGCTCTTATGTTCCCCAGTCCTCGT  248

seq1  TATGGGAAGGGCTTTGCAAGCTACAAAAAGTGAAATACATACACAGAACC  300
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  TATGGGAAGGGCTTTGCAAGATACAAAAAGTGAAATATATACACAGAACC  298

seq1  AACCAAAAAGACATTGATCTAAAATTTGTCCTTCCTCAAAAATATGCTAG  350
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  AACCAAAAAGACATTGATCTAAGATTTGTCCTTCCTCCAAAATATGCTAG  348

seq1  GTCAATGATGTCTTGAATTTATT-GTGAATAACCAATCAATATCTAATTT  399
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  GTCAATGATGTCATGAATTTATTGGTGAATAACCAATCAATATCTAATTT  398

seq1  GACTTAAATACCCAAAGCACCCTTGTGAAAAGTTTTACATATATATGTGT  449
      ||||||||||||||||||||||||||||||||||       |||||||||
seq2  GACTTAAATACCCAAAGCACCCTTGTGAAAAGTT-------TATATGTGT  441

seq1  GTGTATGTGTGTTTGTGCATATATATGTGTGTGCATATATATGTATATAT  499
       ||||| |                          |||||||| |||||||
seq2  ATGTATAT--------------------------ATATATATATATATAT  465

seq1  ATATATATATGTATATATATATATATATAT  529
      ||||||||||||||||||||||||||||||
seq2  ATATATATATGTATATATATATATATATAT  495