BAC Information

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BAC

Clone NameB6Ng01-314F23
Chromosome4 (Build37)
Map Location 14,745,211 - 14,746,329
singlet/doubletsinglet
Overlap geneOtud6b
Upstream geneRunx1t1, LOC625831, LOC433687, LOC100040030, LOC433688, Slc26a7, 1700034K16Rik
Downstream geneLOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64, LOC100040095, LOC633695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314F23.bB6Ng01-314F23.g
ACCGA105326GA105327
length1,1821,118
definitionB6Ng01-314F23.b B6Ng01-314F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagattattttatatta
tttgtgactattggagaagggtgtgttttccctaatttctttctcagcct
gttattcttttgtgtagagaaggccattgacttgttggagtagtttatta
tccagcttacttccaccgaagctgtttatcaaggtttagggagtttctct
ggggtcacttttaggggtcaacttatattaccattccaattcactcgcca
gaggtgaaattctgagcattctcctcccaatc
gaattcactttgtagaccgggctcatcttgtactcacaaagattcacctc
tctgcctcccaagtcctggatttaaaggcattgcacaagtaagtgtaggg
actggaccactgaatcttataagacagaacttggtaatcagctagtcatg
ttgttcatgtttttaactagttcttacaaggacaggtgtggttgcaaatg
ccattaatcccagcacttggaagtctgaggtaggaggttggagagtattg
gctagtctcagctaccatagcaaggcactgcttcaaataagcaaacaaat
tagcagattttctaagaagatatcccttgccccttcctagccgctccttt
ttcttctgtgaaacaagttctcacattgcaggccaggctggactagaaca
ctgcaacccaagctgtccttaggcctgcagatcctgtatctgcttcccag
gtacacttagagacctaggccaccacacctggttatacgaaaggcttctt
tatgtgttagtacagagcgaggtgctgggaacatagcagtcagatgaatg
agatcattgtcctctatgggttgtagttagagttgtacaaatggtgagat
gatcaagatggcaaaaaagtcagactaatgtctccattcttatcgaatgt
gaattaatcctaaaatcattgactttcctatattcttgtcctaggaaaag
aaggctgcattggaaaaggagcgggaagaaaggatagcagaggctgaaat
tgagaacttatctggagccagacatcttgagagtgaaaaacttgctcaaa
tattggcagccagagaattggaaattaaacagattccatctgatggtcac
tgtatgtatggagcacttgaggatcagctgagagaacaagactgtgcgct
gactgtggcttccctgaggagcagactgctgagtacatgcaaacccattc
agacgacttcctgccgtttctaacaaaccccagcacagggagaatatgta
cacgccaggtagtagctttcttcaccacattttgtagtgtttctgctttc
cattaaaattgcttcttgatgtagcaagcagaaccttttcttaatggagg
accaagatcattaacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14745211_14746329
seq2: B6Ng01-314F23.g_65_1182 (reverse)

seq1  AATGTTAATGATCTTTTGTCTTCATTAAG-AAAGGTCTTCCTTGCTACAC  49
      |||||||||||||||    || ||||||| ||||||  | ||||||||| 
seq2  AATGTTAATGATCTTGGTCCTCCATTAAGAAAAGGTTCTGCTTGCTACA-  49

seq1  TCAGGAAGCATTTTAATTGAAAACCAGAAACACTAACAAAATGTGGTGAA  99
      ||| |||||| ||| | || ||| |||||||||| |||||||||||||||
seq2  TCAAGAAGCAATTTTAATGGAAAGCAGAAACACT-ACAAAATGTGGTGAA  98

seq1  GAAAGCTAACTACCTGGCGTGTACATA-TCT-CCTGTGCTGGGGTTTGTT  147
      ||||||| ||||||||||||||||||| ||| ||||||||||||||||||
seq2  GAAAGCT-ACTACCTGGCGTGTACATATTCTCCCTGTGCTGGGGTTTGTT  147

seq1  AGAAACGGCAGGAAGTCGTCTGAATGGGTTTGCATGTACTCAGCAGTCTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACGGCAGGAAGTCGTCTGAATGGGTTTGCATGTACTCAGCAGTCTG  197

seq1  CCTCCTCAGGGAAGCCACAGTCAGCGCACAGTCTTGTTCTCTCAGCTGAT  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTCCTCAGGGAAGCCACAGTCAGCGCACAGTCTTGTTCTCTCAGCTGAT  246

seq1  CCTCAAGTGCTCCATACATACAGTGACCATCAGATGGAATCTGTTTAATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGTGCTCCATACATACAGTGACCATCAGATGGAATCTGTTTAATT  296

seq1  TCCAATTCTCTGGCTGCCAATATTTGAGCAAGTTTTTCACTCTCAAGATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCTCTGGCTGCCAATATTTGAGCAAGTTTTTCACTCTCAAGATG  346

seq1  TCTGGCTCCAGATAAGTTCTCAATTTCAGCCTCTGCTATCCTTTCTTCCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTCCAGATAAGTTCTCAATTTCAGCCTCTGCTATCCTTTCTTCCC  396

seq1  GCTCCTTTTCCAATGCAGCCTTCTTTTCCTAGGACAAGAATATAGGAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTTCCAATGCAGCCTTCTTTTCCTAGGACAAGAATATAGGAAAG  446

seq1  TCAATGATTTTAGGATTAATTCACATTCGATAAGAATGGAGACATTAGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGATTTTAGGATTAATTCACATTCGATAAGAATGGAGACATTAGTC  496

seq1  TGACTTTTTTGCCATCTTGATCATCTCACCATTTGTACAACTCTAACTAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTTTGCCATCTTGATCATCTCACCATTTGTACAACTCTAACTAC  546

seq1  AACCCATAGAGGACAATGATCTCATTCATCTGACTGCTATGTTCCCAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATAGAGGACAATGATCTCATTCATCTGACTGCTATGTTCCCAGCA  596

seq1  CCTCGCTCTGTACTAACACATAAAGAAGCCTTTCGTATAACCAGGTGTGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCTCTGTACTAACACATAAAGAAGCCTTTCGTATAACCAGGTGTGG  646

seq1  TGGCCTAGGTCTCTAAGTGTACCTGGGAAGCAGATACAGGATCTGCAGGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAGGTCTCTAAGTGTACCTGGGAAGCAGATACAGGATCTGCAGGC  696

seq1  CTAAGGACAGCTTGGGTTGCAGTGTTCTAGTCCAGCCTGGCCTGCAATGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACAGCTTGGGTTGCAGTGTTCTAGTCCAGCCTGGCCTGCAATGT  746

seq1  GAGAACTTGTTTCACAGAAGAAAAAGGAGCGGCTAGGAAGGGGCAAGGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTGTTTCACAGAAGAAAAAGGAGCGGCTAGGAAGGGGCAAGGGA  796

seq1  TATCTTCTTAGAAAATCTGCTAATTTGTTTGCTTATTTGAAGCAGTGCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTTAGAAAATCTGCTAATTTGTTTGCTTATTTGAAGCAGTGCCT  846

seq1  TGCTATGGTAGCTGAGACTAGCCAATACTCTCCAACCTCCTACCTCAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGGTAGCTGAGACTAGCCAATACTCTCCAACCTCCTACCTCAGAC  896

seq1  TTCCAAGTGCTGGGATTAATGGCATTTGCAACCACACCTGTCCTTGTAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTGCTGGGATTAATGGCATTTGCAACCACACCTGTCCTTGTAAG  946

seq1  AACTAGTTAAAAACATGAACAACATGACTAGCTGATTACCAAGTTCTGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTTAAAAACATGAACAACATGACTAGCTGATTACCAAGTTCTGTC  996

seq1  TTATAAGATTCAGTGGTCCAGTCCCTACACTTACTTGTGCAATGCCTTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGATTCAGTGGTCCAGTCCCTACACTTACTTGTGCAATGCCTTTA  1046

seq1  AATCCAGGACTTGGGAGGCAGAGAGGTGAATCTTTGTGAGTACAAGATGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGGACTTGGGAGGCAGAGAGGTGAATCTTTGTGAGTACAAGATGA  1096

seq1  GCCCGGTCTACAAAGTGAATTC  1119
      ||||||||||||||||||||||
seq2  GCCCGGTCTACAAAGTGAATTC  1118