BAC Information

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BAC

Clone NameB6Ng01-314K11
Chromosome4 (Build37)
Map Location 19,531,636 - 19,532,782
singlet/doubletsinglet
Overlap gene2410005O16Rik
Upstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306
Downstream geneWwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800, E130310K16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K11.bB6Ng01-314K11.g
ACCGA105521GA105522
length1,1481,138
definitionB6Ng01-314K11.b B6Ng01-314K11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtaccccatttttaagtgggttatttgtttt
gttttgttttgttttgtgtttttggagtctaacttcctgaatcttttata
tgttttggatgtcaggcccctgttagataatagggctagtgaagatcttt
gcccaatttgtaggctgttgttttgtcctattgacagtctttttgcctta
tagaagcttttcagtttcatgaggtcccattcatcaattcttgatcttag
agcctgatccattggtgatctgttcaggaaattttctcctgtaccaatgc
atccaaggctctttcccactttctcttttattggattcagtgtatctggt
tttatgctgagatccttgttccacttggactagagctttgtgtgaggtga
ttatagatcagtttgcaatcttctacacgaagcgtgccagttagatcagc
accatttgttgaagatgctttcttttttccactgtatgttttttgtttct
ttgtcaaaaatcaagtgtccatagttatgtgggtttatttgtgggtcttc
aattctagttcattgatcaacctgtctggttttttattaatggtttcttt
aacctgtcttcaacatatgaattctccctagtagctaacattttacaagt
gtgtgctgtgatttgatatcgctatcagaaagttttatatttccccaaag
ggagtattacactactatggaagaattgtcgtaggaagactttataagat
tttttttttctgaaaatataccatgatatggacaccacaaagtgctcctt
acttccaaaaagacagatacagcagtgaactttgttgcttatctttcatt
agaaaaagaatgatatgacatgataaaaagccgagaaaacctatcttatg
ataagaaagaacttcctgagctcctgagcctaaaaagttactgacattgg
tggcttctggagagtcagtttttctttaggggcagccccgcacctagagt
tatattgagaagcacaaatggccttagttaggttattttcttaaaagaag
aaaatgatgactatggcacaggaaggtgctgaatctgggaacgttaagtt
cctgtgtccacagttagaatctcgattgattcttaaagctcatgccta
gaattctgtctcaagaaaaaattaggattattttgaactttattcatgtt
tcttcaaattatttaacatataattgtacatatttttggagcactggcac
tccagtatattcatacaagatgtaaaccaaatcgaagcagtcagctctga
ctcaggcattcatctctgtcttgggaaaggctgaagtctacatacaagtg
ttgagtaagctgtcctagttccctactgtgctggattctgtggttccctt
atccggcctttgtctcttcctcctcttcccagcttctaataacactgtct
actctcaatttcctgggctttgtttgcacttttctttcaaccaagaatat
tctcagcttttcctgttcaaactcccgttcatcctccaagattcgtaact
cttacttcgttgttttcttatgtggcttcttatagcaatgttaagtttat
acttggtaaaccatttagttgtgttcatgttttcctctgtgcctaagtat
aggagacatttagcaaatgaagataaatcatgttaaccatgatttcattc
atgcactaactcaatgaacagatgttattttccctacactgttctaggca
attggaatgtaataatgatgggtggtttaaaaagaaaatagttcttatat
agcccatgttctatcagcatgaagatactttaaagtgagatcttggtata
atgatgtgcacagtccatatgtacattcaatacatcacaattactttagg
gatttttttgagataaaaacatttgaacaaaaaaagaactatattagcct
aatcaatgtttaatcacacaatttttattagaattcagaccaaaatatta
aaactataaaaataaagacacttatttctctggagctgattttgtttgcc
ctttttatgtacagtggatccaaacttctacagcaaaaacttgctgcttt
taggaaagacatacttgaagctaaacaacaaaaagcttgctgcgttctgg
ttggtaaaagccaagggttatcagcacacacagagagataaacaggtaaa
tatctataataagtcgcagataggctttccttcagccataagtaatgaat
tgaacctgaaacatctgaagagaaactgtttgaaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_19531636_19532782
seq2: B6Ng01-314K11.g_66_1203

seq1  GAATTCTGTCTCAAGAAAAAATTAGGATTATTTTGAACTTTATTCATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTCAAGAAAAAATTAGGATTATTTTGAACTTTATTCATGTT  50

seq1  TCTTCAAATTATTTAACATATAATTGTACATATTTTTGGAGCACTGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATTATTTAACATATAATTGTACATATTTTTGGAGCACTGGCAC  100

seq1  TCCAGTATATTCATACAAGATGTAAACCAAATCGAAGCAGTCAGCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTATATTCATACAAGATGTAAACCAAATCGAAGCAGTCAGCTCTGA  150

seq1  CTCAGGCATTCATCTCTGTCTTGGGAAAGGCTGAAGTCTACATACAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCATTCATCTCTGTCTTGGGAAAGGCTGAAGTCTACATACAAGTG  200

seq1  TTGAGTAAGCTGTCCTAGTTCCCTACTGTGCTGGATTCTGTGGTTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAAGCTGTCCTAGTTCCCTACTGTGCTGGATTCTGTGGTTCCCTT  250

seq1  ATCCGGCCTTTGTCTCTTCCTCCTCTTCCCAGCTTCTAATAACACTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGGCCTTTGTCTCTTCCTCCTCTTCCCAGCTTCTAATAACACTGTCT  300

seq1  ACTCTCAATTTCCTGGGCTTTGTTTGCACTTTTCTTTCAACCAAGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAATTTCCTGGGCTTTGTTTGCACTTTTCTTTCAACCAAGAATAT  350

seq1  TCTCAGCTTTTCCTGTTCAAACTCCCGTTCATCCTCCAAGATTCGTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTTTTCCTGTTCAAACTCCCGTTCATCCTCCAAGATTCGTAACT  400

seq1  CTTACTTCGTTGTTTTCTTATGTGGCTTCTTATAGCAATGTTAAGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCGTTGTTTTCTTATGTGGCTTCTTATAGCAATGTTAAGTTTAT  450

seq1  ACTTGGTAAACCATTTAGTTGTGTTCATGTTTTCCTCTGTGCCTAAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTAAACCATTTAGTTGTGTTCATGTTTTCCTCTGTGCCTAAGTAT  500

seq1  AGGAGACATTTAGCAAATGAAGATAAATCATGTTAACCATGATTTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACATTTAGCAAATGAAGATAAATCATGTTAACCATGATTTCATTC  550

seq1  ATGCACTAACTCAATGAACAGATGTTATTTTCCCTACACTGTTCTAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTAACTCAATGAACAGATGTTATTTTCCCTACACTGTTCTAGGCA  600

seq1  ATTGGAATGTAATAATGATGGGTGGTTTAAAAAGAAAATAGTTCTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATGTAATAATGATGGGTGGTTTAAAAAGAAAATAGTTCTTATAT  650

seq1  AGCCCATGTTCTATCAGCATGAAGATACTTTAAAGTGAGATCTTGGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGTTCTATCAGCATGAAGATACTTTAAAGTGAGATCTTGGTATA  700

seq1  ATGATGTGCACAGTCCATATGTACATTCAATACATCACAATTACTTTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGCACAGTCCATATGTACATTCAATACATCACAATTACTTTAGG  750

seq1  GATTTTTTTGAGATAAAAACATTTGAACAAAAAAAGAACTATATTAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTGAGATAAAAACATTTGAACAAAAAAAGAACTATATTAGCCT  800

seq1  AATCAATGTTTAATCACACAATTTTTATTAGAATTCAGACCAAAATATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGTTTAATCACACAATTTTTATTAGAATTCAGACCAAAATATTA  850

seq1  AAACTATAAAAATAAAGACACTTATTTCTCTGGAGCTGATTTTGTTTGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAAAAATAAAGACACTTATTTCTCTGGAGCTGATTTTGTTTGCC  900

seq1  CTTTTTATGTACAGTGGATCCAAACTTCTACAGCAAAAACTTGCTGCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGTACAGTGGATCCAAACTTCTACAGCAAAAACTTGCTGCTTT  950

seq1  TAGGAAAGACATACTTGAAGCTAAACAACAAAAAGCTTGCTGCGTTCTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAGACATACTTGAAGCTAAACAACAAAAAGCTTGCTGCGTTCTGG  1000

seq1  TTGGTAAAAGCCAAGGGTTATCCAGCACACACAGAAGAAGATAAACAGGT  1050
      ||||||||||||||||||||| |||||||||||||   ||||||||||||
seq2  TTGGTAAAAGCCAAGGGTTAT-CAGCACACACAGA--GAGATAAACAGGT  1047

seq1  AAAATATCTATAATAAAGTAAGGCAGATAGGCTTTCTTTCAGGCATTAGT  1100
       ||||||||||||| ||||   |||||||||||||| ||||| ||| |||
seq2  -AAATATCTATAAT-AAGT--CGCAGATAGGCTTTCCTTCAGCCATAAGT  1093

seq1  AAATGAA-TGAA-CTGAGAACATCCTTAAAAGAGAAACTGTTT-AAATGC  1147
       |||||| |||| |||| ||||||     |||||||||||||| ||||||
seq2  -AATGAATTGAACCTGA-AACATC---TGAAGAGAAACTGTTTGAAATGC  1138