BAC Information

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BAC

Clone NameB6Ng01-316B06
Chromosome4 (Build37)
Map Location 102,680,332 - 102,681,267
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433739, Pde4b, Sgip1, Tctex1d1
Downstream geneInsl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460, LOC622315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316B06.bB6Ng01-316B06.g
ACCGA106563GA106564
length1,162953
definitionB6Ng01-316B06.b B6Ng01-316B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcactatgtaatttgatcactatgtaatttagcaagaat
accctgtcttagggttccctttgctgagaagagaaaccatgaccaaggca
attctaataagagacaacatttaattggggctggcttataggttcagtcc
attatcatcatggtagtgtctacgcaggctagagaaggagctgagagttc
tgcatcttgatctgaaggcactcgggagaagactatcttcaggctactag
gaggaaggtctcaaagcccatccctgggccaaccatattcaaaccaccac
attccactctctgacctccataggcttgtccaaaacatgagtctatgggg
accatacttaggcatagcataatgcaaaatatatttactctaatttgaga
agttctgtagtctataacaatctcaataaatgttaaaaatccagttcaaa
gtctcttctgagattcatgcaatctcttaactgtaatcccttaagaaatc
aaaataaaaaagcagattgcatacctctaacatcattcaggatatacatt
accattccaaaataatcctggtgaggaaagactggaccaaagcaagacag
aaaaccacctgggcaagctccacaaactccacgtctccgtgtctagtgtt
aaagtgctcttcgatctcccaactcctctcatccttgttgattgctgttg
gatctctcattcagcagcaacaaacttggttctcttgggctgtttttgct
ccctgttagcagctttccttggcaggtatcgtacggctctgacatctctt
aacatcttggggtatccaaggcaacttcaactttacagcttcttgttcca
gtgtttgggatccacacatccagttctgccctctagagcactctggttga
ctccactccactgctgctgctgttcttggtgaccatcctatggtatcagc
atctgcagtatactggggtcttccactgcactaggcttcactaaaagcct
ctcattggcccctcatggtgccacactcatctctgcatgaccttcagtct
gggcatcacacacctgagctgcactcacagtgactgtcctgcctctcaag
cctgctctcatgaccttatgcctcaagccagaatacttacgtgaatcttt
acattaccaagt
gaattcatttttttaagtcaggagaattagctagtgtgtgggagtgattt
ttaaaaagtcaacaaatcagacatttataaattaacactcctaaagagtg
agaactctcctccttgggacatcatctgacctgtctttctacgtgctcta
aaaaataatagataaaactcaccatccaacagttatctggttgtcatccc
tagtctcgctgatgcccccatcgtcagcaatcgggttctcatccaccaat
ctggggctgtcacaagcactcaaatgttctcccgggtcaaatgtgtggac
cacttcacccacgtggcacctcggctcttttgaagaccttccttctgagg
ggctgcatacatgtaatgtatgtcgtttaagggaaggggtgatgctttct
tcctcttctcttcaaaataggtttgtcttcaaactttttaccgcttccaa
cccttgagggttatgtgaatttggcaagcacccaatgccttcagcctgtt
tcatgaaaagtcaaagaggccatgattgtgttctcaggaagacggtatat
gtaaaagagctgaaccagggctgaagagatggctcagtgattaagagcac
tgcctactctcccagagaacctgactcctaacactcacatggctgctaac
agttgtctgtcaccacagatctcagagatccaatactctctcctggcatc
cttgggcacctatggtgcacacatgtgtgagcaaaacagcaatatacata
agaatattttcttttaatttctgagacaaaattaagatagttaaaccaag
cagatgtgatagggcacacctgtaagtccaacacttgagaagtggaagca
ggaggattgggagttcaagactagcctcagatacacagaaatcagacaca
acctgggttatatgagctgtatctgtatagtatatatatatatatatata
tat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_102680332_102681267
seq2: B6Ng01-316B06.g_66_997

seq1  GAATTCATTTTTTTAAGTCAGGAGAATTAGCTAGTGTGTGGGAGTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTTTAAGTCAGGAGAATTAGCTAGTGTGTGGGAGTGATTT  50

seq1  TTAAAAAGTCAACAAATCAGACATTTATAAATTAACACTCCTAAAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGTCAACAAATCAGACATTTATAAATTAACACTCCTAAAGAGTG  100

seq1  AGAACTCTCCTCCTTGGGACATCATCTGACCTGTCTTTCTACGTGCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTCCTCCTTGGGACATCATCTGACCTGTCTTTCTACGTGCTCTA  150

seq1  AAAAATAATAGATAAAACTCACCATCCAACAGTTATCTGGTTGTCATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAGATAAAACTCACCATCCAACAGTTATCTGGTTGTCATCCC  200

seq1  TAGTCTCGCTGATGCCCCCATCGTCAGCAATCGGGTTCTCATCCACCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCGCTGATGCCCCCATCGTCAGCAATCGGGTTCTCATCCACCAAT  250

seq1  CTGGGGCTGTCACAAGCACTCAAATGTTCTCCCGGGTCAAATGTGTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTGTCACAAGCACTCAAATGTTCTCCCGGGTCAAATGTGTGGAC  300

seq1  CACTTCACCCACGTGGCACCTCGGCTCTTTTGAAGACCTTCCTTCTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACCCACGTGGCACCTCGGCTCTTTTGAAGACCTTCCTTCTGAGG  350

seq1  GGCTGCATACATGTAATGTATGTCGTTTAAGGGAAGGGGTGATGCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCATACATGTAATGTATGTCGTTTAAGGGAAGGGGTGATGCTTTCT  400

seq1  TCCTCTTCTCTTCAAAATAGGTTTGTCTTCAAACTTTTTACCGCTTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCTTCAAAATAGGTTTGTCTTCAAACTTTTTACCGCTTCCAA  450

seq1  CCCTTGAGGGTTATGTGAATTTGGCAAGCACCCAATGCCTTCAGCCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAGGGTTATGTGAATTTGGCAAGCACCCAATGCCTTCAGCCTGTT  500

seq1  TCATGAAAAGTCAAAGAGGCCATGATTGTGTTCTCAGGAAGACGGTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAAGTCAAAGAGGCCATGATTGTGTTCTCAGGAAGACGGTATAT  550

seq1  GTAAAAGAGCTGAACCAGGGCTGAAGAGATGGCTCAGTGATTAAGAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGAGCTGAACCAGGGCTGAAGAGATGGCTCAGTGATTAAGAGCAC  600

seq1  TGCCTACTCTCCCAGAGAACCTGACTCCTAACACTCACATGGCTGCTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTCTCCCAGAGAACCTGACTCCTAACACTCACATGGCTGCTAAC  650

seq1  AGTTGTCTGTCACCACAGATCTCAGAGATCCAATACTCTCTCCTGGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCTGTCACCACAGATCTCAGAGATCCAATACTCTCTCCTGGCATC  700

seq1  CTTGGGCACCTATGGTGCACACATGTGTGAGCAAAACAGCAATATACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCACCTATGGTGCACACATGTGTGAGCAAAACAGCAATATACATA  750

seq1  AGAATATTTTCTTTTAATTTCTGAGACAAAATTAAGATAGTTAAACCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTTCTTTTAATTTCTGAGACAAAATTAAGATAGTTAAACCAAG  800

seq1  CAGGATGTGATAGGGCACACCTGTAAGTCCAACACTTGAGAAGTGGAAGC  850
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GATGTGATAGGGCACACCTGTAAGTCCAACACTTGAGAAGTGGAAGC  849

seq1  AGGAGGATTGGGAGTTCAAGACTAGCCTCAGATACACAGAAATCAGACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAGGATTGGGAGTTCAAGACTAGCCTCAGATACACAGAAATCAGACA-  898

seq1  CAACCTGGGTTATATGAGGCTGTATCTGTAATAGTA  936
      ||||||||||||||||| ||||||||||| ||||||
seq2  CAACCTGGGTTATATGA-GCTGTATCTGT-ATAGTA  932