BAC Information

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BAC

Clone NameB6Ng01-316L22
Chromosome4 (Build37)
Map Location 37,146,086 - 37,270,056
singlet/doubletdoublet
Overlap geneLOC621458
Upstream geneLOC100042132, LOC545600
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316L22.bB6Ng01-316L22.g
ACCGA107064GA107065
length1,0121,114
definitionB6Ng01-316L22.b B6Ng01-316L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,146,086 - 37,146,901)(37,268,957 - 37,270,056)
sequence
gaattctggactgtataaatgaaagtgagcaacagaatgcactcatgatt
ttcatccaatgatcataaaaatccaaattatgtcacagtttgcttagaac
ataccgaagggattttgaaggtcagtaactcagtctagaaatgacactag
gaagtaatactaatatccaactctatagaatttagtagatgaattcaagt
atttacataactgtgatcattgtcaaattcaggaaaacctttatttcatt
accacattgattattgttaaagtttgggtatctttctcttttttttttaa
atcttttactgtttgcttgtttgttttaaacttcagattttattctcctc
ccagtccaccgtccgactgttctatatcccatacctcctcctcacatccc
agtcgccttaggatgccccaaactcccagcctccaacctaccagatctct
aagcatcctggtgcttccagtctcttgagggtttaggtgcatcttctctc
actaaacccagaccccacctggaagtcctctgctatatatgtgttggggg
cctcatatcagctggtgtatgcagcctggtttttgttccagtgactgata
gatctcaggggtccaggttaattgagacctacaggtcctcctacagggtc
gctctcctcctcatcttcttccagctttcttctatttcaagcacaggggt
tagcagtttctgtccattggttgcctgcaaatatctgcatctgactcttt
cagatgcttgttcggtcttttgaagggcagtcattctaggtccctttttg
tgagcattccatagcctcagtaatagtgtcaagtcttgggcctccccttg
aactggatcccaccttgggactgcctgtggaccttctcttcctcagtccc
ctttctatttccatccctgtagttctttcaaacaggaacaattatgggtc
agagtgtgactgtgggatggcaaccccatccctcacttcatgctgttttt
tctgcttgaagt

gaattcacatctagcctgactaactgaatacacctaaattggaaaaatta
aaataaaaataaaatgatttaaaaatattatagaaagaaattaggtagac
tagttttctagaaagtagaagatcctagattcagccctgataccaaggca
gaaatgaaaggaaaaaagaaaaattggttaaaaagacagggggaaataaa
aaaggaagggagggagaagcaaggaagagaagtaattcctactaggcata
attcacagaaacacttgtaatggacttcttagaagaagaaagctaagcat
caaaagcaatgttggcaatactctataccatgtgaaattttaaattatcg
ctgtttaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacgtgtgtgca
tgtgagtgcacatgtgttcgtgtatatgacaaaaaacaaactgtcaaatt
caattatttcttttgctcaatacaaacatccatcctcatgtcctacacaa
tgatcaaaactaatacagagtagaaattgccagctgtctagagcacacta
cccaaatgtgattgaaagtagaaaaggattcagcagcctagatttagagt
accattttcccttgttacatgtaccttacattgtcttagttattgattac
cacaaacaggtgaatgcttgtatcttcacagatacttgccatattgatgg
tttttaatgatgtcacagatgttagaactattacttgttttcctcatctg
gtaacttcaatagtactttctagaatagaaatagaatttctggaatagct
accagaatgcaagaaggacttccagttggatgtagacgaaccatcagagt
cctgtgtcatatgtgcaagattccttgagcaacagttacttacttttttt
tttttaattaggtattttcttcatttacatttcaaatgctatcccaaagg
tcccccatagccccctttcactcccctacccaccatctccaattctaggc
ctggcattccctggtactggaggcatattaaagttgcaagatcaaggcct
tttcttcccattatggctgactagcatctcttgctacatattgccagcta
gagataccagctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37146086_37146901
seq2: B6Ng01-316L22.b_49_864

seq1  GAATTCTGGACTGTATAAATGAAAGTGAGCAACAGAATGCACTCATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACTGTATAAATGAAAGTGAGCAACAGAATGCACTCATGATT  50

seq1  TTCATCCAATGATCATAAAAATCCAAATTATGTCACAGTTTGCTTAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCAATGATCATAAAAATCCAAATTATGTCACAGTTTGCTTAGAAC  100

seq1  ATACCGAAGGGATTTTGAAGGTCAGTAACTCAGTCTAGAAATGACACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGAAGGGATTTTGAAGGTCAGTAACTCAGTCTAGAAATGACACTAG  150

seq1  GAAGTAATACTAATATCCAACTCTATAGAATTTAGTAGATGAATTCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATACTAATATCCAACTCTATAGAATTTAGTAGATGAATTCAAGT  200

seq1  ATTTACATAACTGTGATCATTGTCAAATTCAGGAAAACCTTTATTTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATAACTGTGATCATTGTCAAATTCAGGAAAACCTTTATTTCATT  250

seq1  ACCACATTGATTATTGTTAAAGTTTGGGTATCTTTCTCTTTTTTTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTGATTATTGTTAAAGTTTGGGTATCTTTCTCTTTTTTTTTTAA  300

seq1  ATCTTTTACTGTTTGCTTGTTTGTTTTAAACTTCAGATTTTATTCTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTACTGTTTGCTTGTTTGTTTTAAACTTCAGATTTTATTCTCCTC  350

seq1  CCAGTCCACCGTCCGACTGTTCTATATCCCATACCTCCTCCTCACATCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCACCGTCCGACTGTTCTATATCCCATACCTCCTCCTCACATCCC  400

seq1  AGTCGCCTTAGGATGCCCCAAACTCCCAGCCTCCAACCTACCAGATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGCCTTAGGATGCCCCAAACTCCCAGCCTCCAACCTACCAGATCTCT  450

seq1  AAGCATCCTGGTGCTTCCAGTCTCTTGAGGGTTTAGGTGCATCTTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCTGGTGCTTCCAGTCTCTTGAGGGTTTAGGTGCATCTTCTCTC  500

seq1  ACTAAACCCAGACCCCACCTGGAAGTCCTCTGCTATATATGTGTTGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCCAGACCCCACCTGGAAGTCCTCTGCTATATATGTGTTGGGGG  550

seq1  CCTCATATCAGCTGGTGTATGCAGCCTGGTTTTTGTTCCAGTGACTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATATCAGCTGGTGTATGCAGCCTGGTTTTTGTTCCAGTGACTGATA  600

seq1  GATCTCAGGGGTCCAGGTTAATTGAGACCTACAGGTCCTCCTACAGGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGGGGTCCAGGTTAATTGAGACCTACAGGTCCTCCTACAGGGTC  650

seq1  GCTCTCCTCCTCATCTTCTTCCAGCTTTCTTCTATTTCAAGCACAGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTCCTCATCTTCTTCCAGCTTTCTTCTATTTCAAGCACAGGGGT  700

seq1  TAGCAGTTTCTGTCCATTGGTTGCCTGCAAATATCTGCATCTGACTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTCTGTCCATTGGTTGCCTGCAAATATCTGCATCTGACTCTTT  750

seq1  CAGATGCTTGTTCGGTCTTTTGAAGGGCAGTCATTCTAGGTCCCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTTGTTCGGTCTTTTGAAGGGCAGTCATTCTAGGTCCCTTTTTG  800

seq1  TGAGCATTCCATAGCC  816
      ||||||||||||||||
seq2  TGAGCATTCCATAGCC  816


seq1: chr4_37268957_37270056
seq2: B6Ng01-316L22.g_85_1182 (reverse)

seq1  AGAGCTTGTATCTCTAGCTG--CATATGTAGCAGAAGATGGCCTAGTCAG  48
      |||||| |||||||||||||   ||||||||||  |||||  ||||||||
seq2  AGAGCTGGTATCTCTAGCTGGCAATATGTAGCAAGAGATG--CTAGTCAG  48

seq1  CCATTATTGGGAAGAAAGGCCCCTGGATCTTGCAAACTTTATATGCCT-C  97
      ||| || |||||||||| |  ||| ||||||||||  || |||||||| |
seq2  CCA-TAATGGGAAGAAAAG-GCCTTGATCTTGCAACTTTAATATGCCTCC  96

seq1  AGTACAGGGGAATGCCAGGGCCAAGAATTGGGAGATGGTGGGTAGGGGAG  147
      |||||  |||||||||| |||| |||||| ||||||||||||||||||||
seq2  AGTACCAGGGAATGCCA-GGCCTAGAATT-GGAGATGGTGGGTAGGGGAG  144

seq1  TGAAAGGGGGCTATGGGGGACTTTTGGGATAGCATTTGAAATGTAAATGA  197
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAAAGGGGGCTATGGGGGACCTTTGGGATAGCATTTGAAATGTAAATGA  194

seq1  AGAAAATACCTAATT-AAAAAAAAAAAGTAAGTAACTGTTGCTCAAGGAA  246
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAAAATACCTAATTAAAAAAAAAAAAGTAAGTAACTGTTGCTCAAGGAA  244

seq1  TCTTGCACATATGACACAGGACTCTGATGGTTCGTCTACATCCAACTGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCACATATGACACAGGACTCTGATGGTTCGTCTACATCCAACTGGA  294

seq1  AGTCCTTCTTGCATTCTGGTAGCTATTCCAGAAATTCTATTTCTATTCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCTTGCATTCTGGTAGCTATTCCAGAAATTCTATTTCTATTCTA  344

seq1  GAAAGTACTATTGAAGTTACCAGATGAGGAAAACAAGTAATAGTTCTAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTACTATTGAAGTTACCAGATGAGGAAAACAAGTAATAGTTCTAAC  394

seq1  ATCTGTGACATCATTAAAAACCATCAATATGGCAAGTATCTGTGAAGATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGACATCATTAAAAACCATCAATATGGCAAGTATCTGTGAAGATA  444

seq1  CAAGCATTCACCTGTTTGTGGTAATCAATAACTAAGACAATGTAAGGTAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTCACCTGTTTGTGGTAATCAATAACTAAGACAATGTAAGGTAC  494

seq1  ATGTAACAAGGGAAAATGGTACTCTAAATCTAGGCTGCTGAATCCTTTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACAAGGGAAAATGGTACTCTAAATCTAGGCTGCTGAATCCTTTTC  544

seq1  TACTTTCAATCACATTTGGGTAGTGTGCTCTAGACAGCTGGCAATTTCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAATCACATTTGGGTAGTGTGCTCTAGACAGCTGGCAATTTCTA  594

seq1  CTCTGTATTAGTTTTGATCATTGTGTAGGACATGAGGATGGATGTTTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATTAGTTTTGATCATTGTGTAGGACATGAGGATGGATGTTTGTA  644

seq1  TTGAGCAAAAGAAATAATTGAATTTGACAGTTTGTTTTTTGTCATATACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAAAAGAAATAATTGAATTTGACAGTTTGTTTTTTGTCATATACA  694

seq1  CGAACACATGTGCACTCACATGCACACACGTGCACACACACACACACACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACACATGTGCACTCACATGCACACACGTGCACACACACACACACACA  744

seq1  CACACACACACTTTAAACAGCGATAATTTAAAATTTCACATGGTATAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACTTTAAACAGCGATAATTTAAAATTTCACATGGTATAGAG  794

seq1  TATTGCCAACATTGCTTTTGATGCTTAGCTTTCTTCTTCTAAGAAGTCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCAACATTGCTTTTGATGCTTAGCTTTCTTCTTCTAAGAAGTCCA  844

seq1  TTACAAGTGTTTCTGTGAATTATGCCTAGTAGGAATTACTTCTCTTCCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTGTTTCTGTGAATTATGCCTAGTAGGAATTACTTCTCTTCCTT  894

seq1  GCTTCTCCCTCCCTTCCTTTTTTATTTCCCCCTGTCTTTTTAACCAATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCCCTCCCTTCCTTTTTTATTTCCCCCTGTCTTTTTAACCAATTT  944

seq1  TTCTTTTTTCCTTTCATTTCTGCCTTGGTATCAGGGCTGAATCTAGGATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTCCTTTCATTTCTGCCTTGGTATCAGGGCTGAATCTAGGATC  994

seq1  TTCTACTTTCTAGAAAACTAGTCTACCTAATTTCTTTCTATAATATTTTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTCTAGAAAACTAGTCTACCTAATTTCTTTCTATAATATTTTT  1044

seq1  AAATCATTTTATTTTTATTTTAATTTTTCCAATTTAGGTGTATTCAGTTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTTATTTTTATTTTAATTTTTCCAATTTAGGTGTATTCAGTTA  1094

seq1  GTCA  1100
      ||||
seq2  GTCA  1098


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