BAC Information

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BAC

Clone NameB6Ng01-316M15
Chromosome4 (Build37)
Map Location 58,793,010 - 58,930,721
singlet/doubletdoublet
Overlap geneOlfr267, AI314180
Upstream geneAkap2, D630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711
Downstream geneLOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316M15.bB6Ng01-316M15.g
ACCGA107096GA107097
length1,140187
definitionB6Ng01-316M15.b B6Ng01-316M15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,929,584 - 58,930,721)(58,793,010 - 58,793,196)
sequence
gaattccttcagagacagggaggctaggaaagaaagaggtgtggccagag
aggcagagcaagcagcaaccaggactaagactgagagataatgagacatg
ggacatagaccagggcagtattgtcgggttagaaaagctgataatctgtc
cagctctagtgcctacgctattaaaaatatattatgaacatatttatcat
tataaatataagtctcagaactggtgctggcacagaaaagcctacagtta
tgtgtatgtacctgcgcacatgtgcacacaggcagtggttgtaaggtaca
caactatgtagatctgcaaaaagtcccaccattctccagtacagaaatac
ataattgcataaaaaacttctgatagcattactcacaacagtaaaaatga
agaacctaagggcttacaaaagacatctttgcatatgcatatctgtgtgg
gaaggcgtgagtgtgcatttgtgtcagttttcaggctagagttcaatggc
agatgtctttcccaattgtctccaccttatcgtttttgagatagggtctc
tcactgaatctagagttcttggtttggtagattagctggccaggaaaccc
cagggaacctcctgtttctgcctacccaggaatggaaattctatccctat
tctgtgcgtctggctttttatgtaggtgctgaggctggaactctggtctt
catggttgcacaacaagcaattcactgactcagtcatcccccagccctga
aagcacagtgtaaaagccagcctacaaggacaatttaaaaatatagtttg
ttatatatttatcaagcagacgtttaacagaatgaatacttacgtacttt
ctggtcacaatgggtaagaatgcagtttgagcaggtgtggtagcacatgt
actcccagctctggggacactaaagtagataattgtagaggacagcctgg
tctacacagtgagttcagagtcctcccggtttataaaagttgtcctcaga
aataagaagtaaaagcagtatggtagatctggagtttctatccatgtgaa
cgaatgcatgtttcctggctacctgatatcagactggaattcaagtaaga
aaacaaacacattcgagttacttgacacgctagttcagtg
attctctatgttgtaaccagaagaatttctatcaagaaaatgcctgtaaa
cacctgctcaaacaaagtcaatggctgttaggcatacatattctctgatc
ctttggccttcttttggctccacacacaaagattcttgacttctgataga
ggagaggagaggagaggagaggagaggagaggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_58929584_58930721
seq2: B6Ng01-316M15.b_47_1186 (reverse)

seq1  CACTGAACTATGCTGTC-AGT-ACTCTGAATGTGTTTTGTTTTCTTACTT  48
      ||||||||||   |||| ||| |||| ||||||| |||||||||||||||
seq2  CACTGAACTAGCGTGTCAAGTAACTC-GAATGTG-TTTGTTTTCTTACTT  48

seq1  GA--TTCAGTCTGATTAATCAGGTAGCCAGGGAACATGCATTCTGTCACA  96
      ||  | |||||||||  |||||||||||||| |||||||||||  |||||
seq2  GAATTCCAGTCTGAT--ATCAGGTAGCCAGGAAACATGCATTCGTTCACA  96

seq1  TGGATAGAAACT-CAGATCTACCATACTGCTTTTAC-TCTTA-TTCTGAG  143
      |||||||||||| ||||||||||||||||||||||| ||||| |||||||
seq2  TGGATAGAAACTCCAGATCTACCATACTGCTTTTACTTCTTATTTCTGAG  146

seq1  GACAACTTGTATAAACCGGGAGGACTCTGAACTCACTGTGTAGACCAGGC  193
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTTTATAAACCGGGAGGACTCTGAACTCACTGTGTAGACCAGGC  196

seq1  TGTCCTCTACAATTATCTACCTTAGTGTCCCCAGAGCTGGGAGTACATGT  243
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTCCTCTACAATTATCTACTTTAGTGTCCCCAGAGCTGGGAGTACATGT  246

seq1  GCTACCACACCTGCTCAAACCTGCATTCTTACCCATTGTGACCAGAAAGT  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCTACCACACCTGCTCAAA-CTGCATTCTTACCCATTGTGACCAGAAAGT  295

seq1  ACGTAAGTATTCATTCTGTTAAACGTCTGCTTGATAAATATATAACAAAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAGTATTCATTCTGTTAAACGTCTGCTTGATAAATATATAACAAAC  345

seq1  TATATTTTTAAATTGTCCTTGTAGGCTGGCTTTTACACTGTGCTTTCAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTAAATTGTCCTTGTAGGCTGGCTTTTACACTGTGCTTTCAGG  395

seq1  GCTGGGGGATGACTGAGTCAGTGAATTGCTTGTTGTGCAACCATGAAGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGGATGACTGAGTCAGTGAATTGCTTGTTGTGCAACCATGAAGAC  445

seq1  CAGAGTTCCAGCCTCAGCACCTACATAAAAAGCCAGACGCACAGAATAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCCAGCCTCAGCACCTACATAAAAAGCCAGACGCACAGAATAGG  495

seq1  GATAGAATTTCCATTCCTGGGTAGGCAGAAACAGGAGGTTCCCTGGGGTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATTTCCATTCCTGGGTAGGCAGAAACAGGAGGTTCCCTGGGGTT  545

seq1  TCCTGGCCAGCTAATCTACCAAACCAAGAACTCTAGATTCAGTGAGAGAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCAGCTAATCTACCAAACCAAGAACTCTAGATTCAGTGAGAGAC  595

seq1  CCTATCTCAAAAACGATAAGGTGGAGACAATTGGGAAAGACATCTGCCAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTCAAAAACGATAAGGTGGAGACAATTGGGAAAGACATCTGCCAT  645

seq1  TGAACTCTAGCCTGAAAACTGACACAAATGCACACTCACGCCTTCCCACA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTAGCCTGAAAACTGACACAAATGCACACTCACGCCTTCCCACA  695

seq1  CAGATATGCATATGCAAAGATGTCTTTTGTAAGCCCTTAGGTTCTTCATT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGCATATGCAAAGATGTCTTTTGTAAGCCCTTAGGTTCTTCATT  745

seq1  TTTACTGTTGTGAGTAATGCTATCAGAAGTTTTTTATGCAATTATGTATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTTGTGAGTAATGCTATCAGAAGTTTTTTATGCAATTATGTATT  795

seq1  TCTGTACTGGAGAATGGTGGGACTTTTTGCAGATCTACATAGTTGTGTAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACTGGAGAATGGTGGGACTTTTTGCAGATCTACATAGTTGTGTAC  845

seq1  CTTACAACCACTGCCTGTGTGCACATGTGCGCAGGTACATACACATAACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAACCACTGCCTGTGTGCACATGTGCGCAGGTACATACACATAACT  895

seq1  GTAGGCTTTTCTGTGCCAGCACCAGTTCTGAGACTTATATTTATAATGAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTTTTCTGTGCCAGCACCAGTTCTGAGACTTATATTTATAATGAT  945

seq1  AAATATGTTCATAATATATTTTTAATAGCGTAGGCACTAGAGCTGGACAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTCATAATATATTTTTAATAGCGTAGGCACTAGAGCTGGACAG  995

seq1  ATTATCAGCTTTTCTAACCCGACAATACTGCCCTGGTCTATGTCCCATGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAGCTTTTCTAACCCGACAATACTGCCCTGGTCTATGTCCCATGT  1045

seq1  CTCATTATCTCTCAGTCTTAGTCCTGGTTGCTGCTTGCTCTGCCTCTCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATCTCTCAGTCTTAGTCCTGGTTGCTGCTTGCTCTGCCTCTCTG  1095

seq1  GCCACACCTCTTTCTTTCCTAGCCTCCCTGTCTCTGAAGGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCTCTTTCTTTCCTAGCCTCCCTGTCTCTGAAGGAATTC  1140

seq1: chr4_58793010_58793196
seq2: B6Ng01-316M15.g_75_261

seq1  ATTCTCTATGTTGTAACCAGAAGAATTTCTATCAAGAAAATGCCTGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTATGTTGTAACCAGAAGAATTTCTATCAAGAAAATGCCTGTAAA  50

seq1  CACCTGCTCAAACAAAGTCAATGGCTGTTAGGCATACATATTCTCTGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTCAAACAAAGTCAATGGCTGTTAGGCATACATATTCTCTGATC  100

seq1  CTTTGGCCTTCTTTTGGCTCCACACACAAAGATTCTTGACTTCTGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCCTTCTTTTGGCTCCACACACAAAGATTCTTGACTTCTGATAGA  150

seq1  GGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGG  187
      |||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGG  187