BAC Information

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BAC

Clone NameB6Ng01-316O13
Chromosome4 (Build37)
Map Location 82,233,886 - 82,372,074
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040144, EG668895, LOC100040164, EG545641, Nfib
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316O13.bB6Ng01-316O13.g
ACCGA107187GA107188
length360845
definitionB6Ng01-316O13.b B6Ng01-316O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,233,886 - 82,234,245)(82,371,230 - 82,372,074)
sequence
tcacagagagaaaggcatgtgcaattttaaaaatattgactgcatgacaa
aatggttttgggaaatatattattggaattaatttcactttttggagtgt
ggatgatagaactttagcatgggcacctggttattaaggctcacattata
tgatttcactgaaaagcagccatctagaatgctggagagtgaaccaggaa
atgattttacaggccaggataataaatctttacaaagcacatttgctttg
cttttaattttgcaatcgacactaacagagaaatcctaaatgtaatttaa
gaagatattccatatatatatatatatatatatatatatatatttgtgtg
tgtgtgtgtg

gaattctggggactctagaaggtataaatgtgagagccgaagggaactgt
ggtggctgccactgctcctctgctgctgccccctccgctgctggtccctc
agctgctggtccctgctgctgccccctcctctgctgccccatccctcctt
ggctactgccccatccccccttggctactgccctctctgctgctggtcct
tgctggttcctattgctatgttttgtcaagtagtcatgagcaaatagatg
aaagatgaaattggagatatcctgaagttggagatttgacctgccccaag
gaactcaacacccctaatcaacaggaagcagtctaaagaggtctacactg
ccccctttcccctctaaccttcattttttcttacctagtgttggagagtt
ggaaaggattgaggtggaataagggtcagaagagtgatagatagtagaac
ccaataaagtaccctgattacttggtttcatttactcattctgttgttta
attaacctcctttgcatcaccgatctcttgcagctgaatgtctggctgat
gagattataaatttggagcagtacaagtgaagaaaggatgaacaacagta
attggaagattgtgacatgtgtatagtgtctacagaggacagaaaaacaa
gcccacactttcttagtccttgttcattcacccattgtgttgcagcttct
cctcctggtgcatgcagcttatttctctacttcttggatgtgggttcagt
agatgacttgagctggatgatttgggttcaaatttattgaataacaaata
aatccacaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82233886_82234245
seq2: B6Ng01-316O13.b_53_412

seq1  TCACAGAGAGAAAGGCATGTGCAATTTTAAAAATATTGACTGCATGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGAGAAAGGCATGTGCAATTTTAAAAATATTGACTGCATGACAA  50

seq1  AATGGTTTTGGGAAATATATTATTGGAATTAATTTCACTTTTTGGAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTTGGGAAATATATTATTGGAATTAATTTCACTTTTTGGAGTGT  100

seq1  GGATGATAGAACTTTAGCATGGGCACCTGGTTATTAAGGCTCACATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATAGAACTTTAGCATGGGCACCTGGTTATTAAGGCTCACATTATA  150

seq1  TGATTTCACTGAAAAGCAGCCATCTAGAATGCTGGAGAGTGAACCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCACTGAAAAGCAGCCATCTAGAATGCTGGAGAGTGAACCAGGAA  200

seq1  ATGATTTTACAGGCCAGGATAATAAATCTTTACAAAGCACATTTGCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTACAGGCCAGGATAATAAATCTTTACAAAGCACATTTGCTTTG  250

seq1  CTTTTAATTTTGCAATCGACACTAACAGAGAAATCCTAAATGTAATTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTTTGCAATCGACACTAACAGAGAAATCCTAAATGTAATTTAA  300

seq1  GAAGATATTCCATATATATATATATATATATATATATATATATTTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATTCCATATATATATATATATATATATATATATATATTTGTGTG  350

seq1  TGTGTGTGTG  360
      ||||||||||
seq2  TGTGTGTGTG  360


seq1: chr4_82371230_82372074
seq2: B6Ng01-316O13.g_68_912 (reverse)

seq1  CACACACACACACACACACACACACACACACACAGCTTGTGGATTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACAGCTTGTGGATTTATTT  50

seq1  GTTATTCAATAAATTTGAACCCAAATCATCCAGCTCAAGTCATCTACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCAATAAATTTGAACCCAAATCATCCAGCTCAAGTCATCTACTGA  100

seq1  ACCCACATCCAAGAAGTAGAGAAATAAGCTGCATGCACCAGGAGGAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATCCAAGAAGTAGAGAAATAAGCTGCATGCACCAGGAGGAGAAG  150

seq1  CTGCAACACAATGGGTGAATGAACAAGGACTAAGAAAGTGTGGGCTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACACAATGGGTGAATGAACAAGGACTAAGAAAGTGTGGGCTTGTT  200

seq1  TTTCTGTCCTCTGTAGACACTATACACATGTCACAATCTTCCAATTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCCTCTGTAGACACTATACACATGTCACAATCTTCCAATTACTG  250

seq1  TTGTTCATCCTTTCTTCACTTGTACTGCTCCAAATTTATAATCTCATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATCCTTTCTTCACTTGTACTGCTCCAAATTTATAATCTCATCAG  300

seq1  CCAGACATTCAGCTGCAAGAGATCGGTGATGCAAAGGAGGTTAATTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATTCAGCTGCAAGAGATCGGTGATGCAAAGGAGGTTAATTAAAC  350

seq1  AACAGAATGAGTAAATGAAACCAAGTAATCAGGGTACTTTATTGGGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGAGTAAATGAAACCAAGTAATCAGGGTACTTTATTGGGTTCT  400

seq1  ACTATCTATCACTCTTCTGACCCTTATTCCACCTCAATCCTTTCCAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTATCACTCTTCTGACCCTTATTCCACCTCAATCCTTTCCAACTC  450

seq1  TCCAACACTAGGTAAGAAAAAATGAAGGTTAGAGGGGAAAGGGGGCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACTAGGTAAGAAAAAATGAAGGTTAGAGGGGAAAGGGGGCAGTG  500

seq1  TAGACCTCTTTAGACTGCTTCCTGTTGATTAGGGGTGTTGAGTTCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTCTTTAGACTGCTTCCTGTTGATTAGGGGTGTTGAGTTCCTTGG  550

seq1  GGCAGGTCAAATCTCCAACTTCAGGATATCTCCAATTTCATCTTTCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTCAAATCTCCAACTTCAGGATATCTCCAATTTCATCTTTCATCT  600

seq1  ATTTGCTCATGACTACTTGACAAAACATAGCAATAGGAACCAGCAAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCATGACTACTTGACAAAACATAGCAATAGGAACCAGCAAGGAC  650

seq1  CAGCAGCAGAGAGGGCAGTAGCCAAGGGGGGATGGGGCAGTAGCCAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCAGAGAGGGCAGTAGCCAAGGGGGGATGGGGCAGTAGCCAAGGA  700

seq1  GGGATGGGGCAGCAGAGGAGGGGGCAGCAGCAGGGACCAGCAGCTGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGGCAGCAGAGGAGGGGGCAGCAGCAGGGACCAGCAGCTGAGGG  750

seq1  ACCAGCAGCGGAGGGGGCAGCAGCAGAGGAGCAGTGGCAGCCACCACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGCGGAGGGGGCAGCAGCAGAGGAGCAGTGGCAGCCACCACAGT  800

seq1  TCCCTTCGGCTCTCACATTTATACCTTCTAGAGTCCCCAGAATTC  845
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCGGCTCTCACATTTATACCTTCTAGAGTCCCCAGAATTC  845


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