BAC Information

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BAC

Clone NameB6Ng01-318L14
Chromosome4 (Build37)
Map Location 70,825,666 - 70,965,357
singlet/doubletdoublet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318L14.bB6Ng01-318L14.g
ACCGA108538GA108539
length872295
definitionB6Ng01-318L14.b B6Ng01-318L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,825,666 - 70,826,538)(70,965,063 - 70,965,357)
sequence
gaattcagggtagatagttttcttttatattcacatggtcatgacttaca
tgcctgtgtaaggtaaacaaggccaaccatactgtaaggaggttagcctt
tcatcgggttaaacattgaataaaagaaatgctttcgttgttaagtggaa
aaaagccatcctgagaagcagtaatttggaagctttttgttataaaaata
cttatttagaatgagtcacattgtctttaaaaaaaaaactactttagctg
tcattcaaggttgaaaagaaacttacagtgccaatttgtttactttaata
atatctaaacagttagaagcagaccagggctgacattggttatatgctcg
taagggttgttttatgttgtataaaatcagaattttatttttataatata
cctataatcttcttgtaagctactttgatatttttattcatgctattgaa
taagctgatatcaatattccagttaaaaatgaagtgctaaacctgaagta
aatagtgtattatgtagcataaactacaggagacaaatataattgtccaa
tgtaaaaatatgtatattacctctggaaaatctgtagcattacctttgga
aaaagtatttgatgtgcaaacatatacaattttatgttaatatatcatgt
taaggcatcgattttatgtctaattactataaattttaacctttccaact
ggttgactttattaaaggtaggatcttgttatgtttctcataatatagct
gttttgaacccacttttctgacttcatcaatctgcctaactgtgactgga
tgtatacactgccactccatataacatcctctttttaacatgtgatgaaa
ttatttaagtatgttgaatgtt
tcttctgtctgaactacaatggtggctcactgttacatatcttgggttaa
ctgttgaagggagaaaatatccaggaaaatccctttggtgttgtagcaaa
tctgaggcagcactaaggaggtaataaagactgacttgccaaaactaagc
agccttctgaatattgagctgctccaagcactctgtgaggaaagctgaag
taattgttctccacgggcgtgcaagcggcatccatgaaataagatatata
ttctttacatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70825666_70826538
seq2: B6Ng01-318L14.b_44_915

seq1  GAATTCAAATTAAATAGTTTTCTTTTATATTCACATGGTCATGACTTACA  50
      |||||||   || |||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTAGATAGTTTTCTTTTATATTCACATGGTCATGACTTACA  50

seq1  TGCCTGTGTAAAGTAAACAAGGCCAACCATACTGTAAGGAGGTTAGCCTT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGTAAGGTAAACAAGGCCAACCATACTGTAAGGAGGTTAGCCTT  100

seq1  TCATCTGGTTAAACATTGAATAAAAGAAATGCTTTCGTTGTTAAGTGGAA  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGGGTTAAACATTGAATAAAAGAAATGCTTTCGTTGTTAAGTGGAA  150

seq1  AAAAGCCATCCTGAGAAGCAGTAATTTGGAAGCTTTTTGTTATAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCATCCTGAGAAGCAGTAATTTGGAAGCTTTTTGTTATAAAAATA  200

seq1  CTTATTTAGAATGAGTCACATTGTCTTTAAAAAAAAAACTACTTTAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTAGAATGAGTCACATTGTCTTTAAAAAAAAAACTACTTTAGCTG  250

seq1  TCATTCAAGGTTGAAAAGAAACTTACAGTGCCAATTTGTTTACTTTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAGGTTGAAAAGAAACTTACAGTGCCAATTTGTTTACTTTAATA  300

seq1  ATATCTAAACAGTTAGAAGCAGACCAGGGCTGACATTGGTTATATGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATATCTAAACAGTTAGAAGCAGACCAGGGCTGACATTGGTTATATGCTCG  350

seq1  TAAGGGTTGTTTTATGTTGTATAAAATCAGAATTTTATTTTTATAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTTGTTTTATGTTGTATAAAATCAGAATTTTATTTTTATAATATA  400

seq1  CCTATAATCTTCTTGTAAGCTACTTTGATATTTTTATTCATGCTATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAATCTTCTTGTAAGCTACTTTGATATTTTTATTCATGCTATTGAA  450

seq1  TAAGCAGATATCAATATTCCAGTTAAAAATGAAGTGCTAAACCTGAAGTA  500
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGATATCAATATTCCAGTTAAAAATGAAGTGCTAAACCTGAAGTA  500

seq1  AATAGTGTATTATGTAGCATAAACTACAGTAGACAAATATAATTGTCCAA  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATAGTGTATTATGTAGCATAAACTACAGGAGACAAATATAATTGTCCAA  550

seq1  TGTAAAAATATGTATATTACCTCTTGAAAATATGTAACATTACCTTTGGA  600
      |||||||||||||||||||||||| |||||| |||| |||||||||||||
seq2  TGTAAAAATATGTATATTACCTCTGGAAAATCTGTAGCATTACCTTTGGA  600

seq1  AAAAGTATTTTATGTGCAAACATATACAATTTTATGTTAATATATCATGT  650
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATTTGATGTGCAAACATATACAATTTTATGTTAATATATCATGT  650

seq1  TAAGGCATCAATTTTATGTCTAATTACTATAAATTTTAACCTTTCCAACT  700
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATCGATTTTATGTCTAATTACTATAAATTTTAACCTTTCCAACT  700

seq1  GGTTGACTTTATTAAAGGTAGGATCTTGTTATGTTTCTCATAATATAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGACTTTATTAAAGGTAGGATCTTGTTATGTTTCTCATAATATAGCT  750

seq1  GTTTTGAACCCAGTTTTCTGACTTCATCAATCTGCCTAACTGTGACTGGA  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAACCCACTTTTCTGACTTCATCAATCTGCCTAACTGTGACTGGA  800

seq1  TGTATACACTGCCACTCCTTATAACATCTTCTTTTTAAACATGTGATGAA  850
      |||||||||||||||||| ||||||||| ||||||| |||||||||||||
seq2  TGTATACACTGCCACTCCATATAACATCCTCTTTTT-AACATGTGATGAA  849

seq1  ATTATTTAATTATGTTGAATGTT  873
      ||||||||| |||||||||||||
seq2  ATTATTTAAGTATGTTGAATGTT  872

seq1: chr4_70965063_70965357
seq2: B6Ng01-318L14.g_71_365 (reverse)

seq1  CACACACACACACACACACACACACACACACACTCATGTAAAGAATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACTCATGTAAAGAATATAT  50

seq1  ATCTTATTTCATGGATGCTGCTTGCACGCCCGTGGAGAACAATTACTTCA  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCTTATTTCATGGATGCCGCTTGCACGCCCGTGGAGAACAATTACTTCA  100

seq1  GCTTTCCTCACAGAGTGCTTGGAGCAGCTCAATATTCAGAAGGCTGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTCACAGAGTGCTTGGAGCAGCTCAATATTCAGAAGGCTGCTTA  150

seq1  GTTTTGGCAAGTCAGTCTTTATTACCTCCTTAGTGCTGCCTCAGATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGCAAGTCAGTCTTTATTACCTCCTTAGTGCTGCCTCAGATTTGC  200

seq1  TACAACACCAAAGGGATTTTCCTGGATATTTTCTCCCTTCAACAGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACCAAAGGGATTTTCCTGGATATTTTCTCCCTTCAACAGTTAAC  250

seq1  CCAAGATATGTAACAGTGAGCCACCATTGTAGTTTTGACAGAAGA  295
      ||||||||||||||||||||||||||||||||||  |||||||||
seq2  CCAAGATATGTAACAGTGAGCCACCATTGTAGTTCAGACAGAAGA  295