BAC Information

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BAC

Clone NameB6Ng01-319C18
Chromosome4 (Build37)
Map Location 7,948,095 - 7,949,259
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319C18.bB6Ng01-319C18.g
ACCGA108871GA108872
length1,1691,166
definitionB6Ng01-319C18.b B6Ng01-319C18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgcatagattccatggcagtgttcatgtatagataccatgc
tactttcagggcataataagaatgaactactctgatgtgacaaagagctg
ccatagtctcaaaatgcagcacttggacatcagactctcagaacatccct
tgaagttcttctggttagctcccatttcctagcttggtgctaacatgtaa
gcaatgtgtcttgagatatatcttactaattttccatggcaacgactcac
tcacaaacaagaatatagcaactaaatataggccagcaatgactaaggta
attgtcttttgttttctaagtgacaaagctccactttgactcctatgtac
aatatgaatgagagtcttaaatgctataaagccctgaaagttaactgagc
atgctatctttacatggtatagagtatgcatacactttgtggtggttgca
aaaggtggatgaaagttctgactccaggtaagtattttaatcttaattat
tttcttaatttaaataatatattgatgggtgttttacctacatgtgtagc
acagtgcctaccaaggccagagactgtctcagaattcctgtgaaactaaa
attatagatgcttgtaaattaccatgtgtgctgggcactggggctagatc
ctctggaagagaaccaagtgttcataaccactgatctacctctctggcca
catgttaagtacttttaataattctatgcatgtgtggttgcataaggtgc
agattatgtgatgatccaaagagagcagtggctagaatgaacacctcctt
ccttgaacattcatcactttttctggagactaccctaagttccatctttg
ctatgtgaggtatacattattgttagtatggtcacagtctgtgtaattgg
gtcagcactagtccttatagctaattctaactttgtattcattgacttaa
aaaatttaatgtgcattctaaagttctttatatcatgtatattaaatata
tataaatatgtatatatacatgtatatctatattatacatacagaatata
catatatattatatttcaattttaaaatatgccttgtaatagaatggatt
cagcagctaatatgctgctcaggcaaaggtctttggatccagttctcaga
actacacaaacccctcaaa

gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaatcatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatttgagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatgaaaatgctattc
cagacaaatttgcaaattgatccttccaattcgttgaagaattgagttgg
aattttgatggggattgcattgaatctgtagattgcttttggcaagatag
ccatttttacaatgttgatcctgccaatccatgagcatgggagatctttc
catcttctgagatcttctttaatttctttcttcagagatttgaagttttt
atcatacagatctttcacctccttagttagagtcacgccaagatatttta
tattatttgtgactattgagaagggtgttgtttccctaatttctttctca
gcctgtttattctttgtatagagaaaggccattgacttgtttgagtttat
tttatatccagctacttcaccgaagctgtttatcaggtttaggagttctc
tggtagattttttagggtcacttatatatactatcatatcatctgcaaaa
agtgatattttgacttcctcttttccaatttgtatccctttgatctcctt
tttgttgtcggaattgctctggctaatacttcaagtacctatgttgaaaa
ggtagggaagaaagtggggcagccttgtctagtccctgaattttagtggg
gatggctttccagcttcttctccaatttacttggatgttggctactgggt
tggctgaagattgctttatacaggttaggtatggggccctgcatttctgg
atccttccagacttttatacagtgaataggggtgtgtgaatctgtgtcaa
atggcctttcctcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7948095_7949259
seq2: B6Ng01-319C18.b_46_1214 (reverse)

seq1  TTTGAGGGG-TTGTGTAGTCCCTGAGAACTGGAACC-AAGACCTCTGCAA  48
      ||||||||| |||||||||  |||||||||||| || ||||||| |||  
seq2  TTTGAGGGGTTTGTGTAGT-TCTGAGAACTGGATCCAAAGACCTTTGCCT  49

seq1  GAGCAGCAATTATTAACTGCTG-ATCCA-TCTA-TCCAGGCCATATTTTA  95
      ||||||||  ||||| |||||| ||||| |||| | || | |||||||||
seq2  GAGCAGCA--TATTAGCTGCTGAATCCATTCTATTACAAGGCATATTTTA  97

seq1  AAATT-AAATAT-ATATATATGTATA-TCTGTATGTAT-ATATAGATATA  141
      ||||| |||||| ||||||||||||| ||||||||||| |||||||||||
seq2  AAATTGAAATATAATATATATGTATATTCTGTATGTATAATATAGATATA  147

seq1  CATGTATATATACATATTTATATATATTTAATATACATGATTATTAAAGA  191
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  CATGTATATATACATATTTATATATATTTAATATACATGAT--ATAAAGA  195

seq1  ACTTTAGAATGCACATTAAATTTTTTAAGTCAATGAATACAAAGTTAGAA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGAATGCACATTAAATTTTTTAAGTCAATGAATACAAAGTTAGAA  245

seq1  TTAGCTATAAGGACTAGTGCTGACCCAATTACACAGACTGTGACCATACT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTATAAGGACTAGTGCTGACCCAATTACACAGACTGTGACCATACT  295

seq1  AACAATAATGTATACCTCACATAGCAAAGATGGAACTTAGGGTAGTCTCC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATGTATACCTCACATAGCAAAGATGGAACTTAGGGTAGTCTCC  345

seq1  AGAAAAAGTGATGAATGTTCAAGGAAGGAGGTGTTCATTCTAGCCACTGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTGATGAATGTTCAAGGAAGGAGGTGTTCATTCTAGCCACTGC  395

seq1  TCTCTTTGGATCATCACATAATCTGCACCTTATGCAACCACACATGCATA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGGATCATCACATAATCTGCACCTTATGCAACCACACATGCATA  445

seq1  GAATTATTAAAAGTACTTAACATGTGGCCAGAGAGGTAGATCAGTGGTTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTAAAAGTACTTAACATGTGGCCAGAGAGGTAGATCAGTGGTTA  495

seq1  TGAACACTTGGTTCTCTTCCAGAGGATCTAGCCCCAGTGCCCAGCACACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTTGGTTCTCTTCCAGAGGATCTAGCCCCAGTGCCCAGCACACA  545

seq1  TGGTAATTTACAAGCATCTATAATTTTAGTTTCACAGGAATTCTGAGACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTTACAAGCATCTATAATTTTAGTTTCACAGGAATTCTGAGACA  595

seq1  GTCTCTGGCCTTGGTAGGCACTGTGCTACACATGTAGGTAAAACACCCAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGCCTTGGTAGGCACTGTGCTACACATGTAGGTAAAACACCCAT  645

seq1  CAATATATTATTTAAATTAAGAAAATAATTAAGATTAAAATACTTACCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATTATTTAAATTAAGAAAATAATTAAGATTAAAATACTTACCTG  695

seq1  GAGTCAGAACTTTCATCCACCTTTTGCAACCACCACAAAGTGTATGCATA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAACTTTCATCCACCTTTTGCAACCACCACAAAGTGTATGCATA  745

seq1  CTCTATACCATGTAAAGATAGCATGCTCAGTTAACTTTCAGGGCTTTATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACCATGTAAAGATAGCATGCTCAGTTAACTTTCAGGGCTTTATA  795

seq1  GCATTTAAGACTCTCATTCATATTGTACATAGGAGTCAAAGTGGAGCTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAGACTCTCATTCATATTGTACATAGGAGTCAAAGTGGAGCTTT  845

seq1  GTCACTTAGAAAACAAAAGACAATTACCTTAGTCATTGCTGGCCTATATT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTAGAAAACAAAAGACAATTACCTTAGTCATTGCTGGCCTATATT  895

seq1  TAGTTGCTATATTCTTGTTTGTGAGTGAGTCGTTGCCATGGAAAATTAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTATATTCTTGTTTGTGAGTGAGTCGTTGCCATGGAAAATTAGT  945

seq1  AAGATATATCTCAAGACACATTGCTTACATGTTAGCACCAAGCTAGGAAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATCTCAAGACACATTGCTTACATGTTAGCACCAAGCTAGGAAA  995

seq1  TGGGAGCTAACCAGAAGAACTTCAAGGGATGTTCTGAGAGTCTGATGTCC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTAACCAGAAGAACTTCAAGGGATGTTCTGAGAGTCTGATGTCC  1045

seq1  AAGTGCTGCATTTTGAGACTATGGCAGCTCTTTGTCACATCAGAGTAGTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGCATTTTGAGACTATGGCAGCTCTTTGTCACATCAGAGTAGTT  1095

seq1  CATTCTTATTATGCCCTGAAAGTAGCATGGTATCTATACATGAACACTGC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTATTATGCCCTGAAAGTAGCATGGTATCTATACATGAACACTGC  1145

seq1  CATGGAATCTATGCAGTTGAATTC  1165
      ||||||||||||||||||||||||
seq2  CATGGAATCTATGCAGTTGAATTC  1169


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