BAC Information

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BAC

Clone NameB6Ng01-319L15
Chromosome4 (Build37)
Map Location 145,714,530 - 145,715,703
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319L15.bB6Ng01-319L15.g
ACCGA109285GA109286
length1,1701,149
definitionB6Ng01-319L15.b B6Ng01-319L15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcacgcaaaagataaaaagcagcagaagaagacttgtcgagta
tgattggtgttgagctctgtggcacatagtggatctgaaaataaccaggc
agaatctcttggtcatgtgacttgggcagaagaacagccttctttaccca
cagaattaggatgtgctgggataaactttcctacctgaagttaaccctga
gcttcactgttcttactgattgttcttgtttttctgagacaagcttttct
tgaattgccctggctatattagaacttgctcagaagaccaggctggcctc
aaactaagaaatccacctgcctctgcctcacagcattggaattaagtcat
ggaccactgctgcctggcattcatagattctaaaatcaagtttctaatca
ttaagatctgtagtcacaaagatcatttttgcctgaaagtaaccccagaa
tacccacactctaacaggtgtgatcatgaggtttgctgttacgtatgtag
ctggctttgatgttctggcatgcaatggagtgctgcactagggcttcaag
atgcccaatggagtccttgactttccgcccataaacttccggtggttcga
gagaggatgattacagaaacatcagtcgcttctttctataaatgtttcat
aatgcaaatagaatgtgaagaattttttttatgtggtttttcgagacagg
gtttctctgtatagccctggctgtcctggaactcactttgtagaccaggc
tggccttgaactcagaaatctgtcttcctctgcgccccccacccccaccc
cgattgctgggattaaaggcgtgcaccaccacatccggcaatgtgaagaa
atactaaaaatatcattcattaattattgaaaagttcagcctctggaaat
ggcgatatctctccttatactgccagcttaaaggagcaattgagaaattg
tgattataaaattggaatcctggaaatggtggtagaataaatcgccataa
agtatttttctctctgaacgtgtaaccattttcagctgtagccttttctg
tacagtggagctgccattctgtgtagacagtggccagctgcccccacact
tcactatgctacctaattttataatcccctgtgtctggaaaaacaggtga
cactcatgtttaattaagag
gaattcatacaggagagagaccttacaaatgcagtgaatgtgaaaaatgc
ttttcccgaaaattccatcttggtattcatcagagaattcatacaggaaa
gaaaccttacaaatagattgtatgtgacaaatacaatactcacaatgtca
gtcttagaaatcatcagttatttcatacagtagagaatctttataaatga
agtaaatgaggcaattctttaccaagatatattatctcaaaattcattag
agaatacttagagaagacaaacttttcaaatatattgtaggtatgaatcc
tttccttttggcctatttcctagactgtaacagtgaatacttacaggcta
gaaacttaactcatgcattgtatgaagaaatatctttgacttcatttcag
gtcagagagaacatctaagaactttttagggtaaagtatttctgttgggg
aaaatggtgtattcttgacaacacttgaggctccacactagagaattagt
atgattatgaaaatcttgtgaaaatattcatgcaatgttcaaatcttagg
taatgtcaactatttatgctgtgagaaactctgaaaatgtgaaatgtaga
aagcttttcatgacacctttttacttgttcatcctcaaacgttaccagat
gaagacaagttgggaagtcagaagatagtattttataacactttaatcga
gaaagagataatccatttcaaaaggaaactatttaaggtctttaatacaa
ccctcaaaataggtaataaaactggtagcattttgtatatttttattgtc
ctgtaactaactccaataaaactgaaagattcaacaaatttgctttggtt
gtttccaatttgcagttgggatactcagatgaatatatgttgcatcttcc
caggaaatgcctcacataaaacatagactgaagtcatgacatttttgcaa
acctgtatcataaagttaatagtggtgatttttactggtggatacattac
ctttgggatgtacgaccctgtcacagtggttgcttacagcataggaaaac
acatatttccattgttctaaaataagaaatcatccatgagtgtaaggtag
tcttggcccaccctaaatattgattccaatgtcaggtatttagcattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145714530_145715703
seq2: B6Ng01-319L15.b_48_1217

seq1  GAATTCTTCACGCAAAAGATAAAAAGCAGCAGAAGAAGACTTGTCGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACGCAAAAGATAAAAAGCAGCAGAAGAAGACTTGTCGAGTA  50

seq1  TGATTGGTGTTGAGCTCTGTGGCACATAGTGGATCTGAAAATAACCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGTGTTGAGCTCTGTGGCACATAGTGGATCTGAAAATAACCAGGC  100

seq1  AGAATCTCTTGGTCATGTGACTTGGGCAGAAGAACAGCCTTCTTTACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCTTGGTCATGTGACTTGGGCAGAAGAACAGCCTTCTTTACCCA  150

seq1  CAGAATTAGGATGTGCTGGGATAAACTTTCCTACCTGAAGTTAACCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAGGATGTGCTGGGATAAACTTTCCTACCTGAAGTTAACCCTGA  200

seq1  GCTTCACTGTTCTTACTGATTGTTCTTGTTTTTCTGAGACAAGCTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACTGTTCTTACTGATTGTTCTTGTTTTTCTGAGACAAGCTTTTCT  250

seq1  TGAATTGCCCTGGCTATATTAGAACTTGCTCAGAAGACCAGGCTGGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCCCTGGCTATATTAGAACTTGCTCAGAAGACCAGGCTGGCCTC  300

seq1  AAACTAAGAAATCCACCTGCCTCTGCCTCACAGCATTGGAATTAAGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGAAATCCACCTGCCTCTGCCTCACAGCATTGGAATTAAGTCAT  350

seq1  GGACCACTGCTGCCTGGCATTCATAGATTCTAAAATCAAGTTTCTAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACTGCTGCCTGGCATTCATAGATTCTAAAATCAAGTTTCTAATCA  400

seq1  TTAAGATCTGTAGTCACAAAGATCATTTTTGCCTGAAAGTAACCCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCTGTAGTCACAAAGATCATTTTTGCCTGAAAGTAACCCCAGAA  450

seq1  TACCCACACTCTAACAGGTGTGATCATGAGGTTTGCTGTTACGTATGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACACTCTAACAGGTGTGATCATGAGGTTTGCTGTTACGTATGTAG  500

seq1  CTGGCTTTGATGTTCTGGCATGCAATGGAGTGCTGCACTAGGGCTTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTGATGTTCTGGCATGCAATGGAGTGCTGCACTAGGGCTTCAAG  550

seq1  ATGCCCAATGGAGTCCTTGACTTTCCGCCCATAAACTTCCGGTGGTTCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAATGGAGTCCTTGACTTTCCGCCCATAAACTTCCGGTGGTTCGA  600

seq1  GAGAGGATGATTACAGAAACATCAGTCGCTTCTTTCTATAAATGTTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATGATTACAGAAACATCAGTCGCTTCTTTCTATAAATGTTTCAT  650

seq1  AATGCAAATAGAATGTGAAGAATTTTTTTTATGTGGTTTTTCGAGACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATAGAATGTGAAGAATTTTTTTTATGTGGTTTTTCGAGACAGG  700

seq1  GTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGC  750

seq1  TGGCCTTGAACTCAGAAATCTGTCTTCCTCTGCGCCCCCCACCCCCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGAACTCAGAAATCTGTCTTCCTCTGCGCCCCCCACCCCCACCC  800

seq1  CGATTGCTGGGATTAAAGGCGTGCACCACCACATCCGGCAATGTGAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGCTGGGATTAAAGGCGTGCACCACCACATCCGGCAATGTGAAGAA  850

seq1  ATACTAAAAATATCATTCATTAATTATTGAAAAGTTCAGCCTCTGGAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAAATATCATTCATTAATTATTGAAAAGTTCAGCCTCTGGAAAT  900

seq1  GGCGATATCTCTCCTTATACTGCCAGCTTAAAGGAGCAATTGAGAAATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGATATCTCTCCTTATACTGCCAGCTTAAAGGAGCAATTGAGAAATTG  950

seq1  TGAATTATAAAATTGGAATCCTGG-AATGGTGGTAGAATAAATCGCCATA  999
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TG-ATTATAAAATTGGAATCCTGGAAATGGTGGTAGAATAAATCGCCATA  999

seq1  AAGTTATTTTCTCCTCTGAAACGTGTTAACCATTTTCAGCTGTAG-CTTT  1048
      ||||  |||||| ||||| |||||| ||||||||||||||||||| ||||
seq2  AAGTATTTTTCT-CTCTG-AACGTG-TAACCATTTTCAGCTGTAGCCTTT  1046

seq1  TCTGTTACAGTGAGCCTGCCCATTCTGTGTTAGGACAGTG--CAGCTG-C  1095
      |||| |||||||   ||| |||||||||||   |||||||  |||||| |
seq2  TCTG-TACAGTGGAGCTG-CCATTCTGTGT--AGACAGTGGCCAGCTGCC  1092

seq1  CCCACACTTCACTATGCTTACTATTTTTATA--TCCCTGTGGTTCTGGAA  1143
      ||||||||||||||||||  ||| |||||||   |||||||  |||||||
seq2  CCCACACTTCACTATGCTACCTAATTTTATAATCCCCTGTG--TCTGGAA  1140

seq1  AAAACAAGGTGACA-TCATGTTAAATTAAGAG  1174
      |||   |||||||| ||||||| |||||||||
seq2  AAA--CAGGTGACACTCATGTTTAATTAAGAG  1170