BAC Information

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BAC

Clone NameB6Ng01-319P03
Chromosome4 (Build37)
Map Location 15,083,532 - 15,198,256
singlet/doubletdoublet
Overlap geneTmem64
Upstream geneLOC625831, LOC433687, LOC100040030, LOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1
Downstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319P03.bB6Ng01-319P03.g
ACCGA109451GA109452
length1,1491,146
definitionB6Ng01-319P03.b B6Ng01-319P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,197,086 - 15,198,256)(15,083,532 - 15,084,678)
sequence
gaattccattacccatacaaaccacaatcatgtaggcctttgagatcaag
actaccattttattggaagtaactttaaaatgcagtttttaaggaggacc
tcacagagcagctatcacaagaatggtgtaaggtgcagggtgcgatggtc
tgaatggactgatcaaagtctttcttctagaagagggtagtctttaagaa
ctgtctctcctgtactcagtaccaacagtccttctttactggtctagagc
tccttttacctggaaactgagaaaagtgaaacctgaagtttctagtagag
acaggatttcatttgctaaatttaaatagtgtctacttctaagggtgcca
aggattaaataaatgaagacatcaaaaggtgcattgccactcactataga
tggtaaagaaagaactagtcaagggtagatacaatccattctcaggggaa
agaaaacttacctgaggattcacaaagggaaataatcaaatcatatttgt
attgcagagttcacttttcgataaagatgggagaatgttagcctgaagca
aaaagcagggacatttggtaaaggttcctgaatcacagcagaggtagtag
gctagactgaagtgtctgtcaggaggcaatgctcacaggactcgggcttg
attaacacttggtgtgtggacagcatgccaagtaccagaggcattaagtc
tatgctagctgctctactctctcctactgccacaccatcatcatgctgtg
gggtcaggccaggaaaaggtgagatccgctacaaaggacccgtcaaagtc
cagaattaactcactgttctgagcaaccaagctcaaggcaacgcaacttg
gtcatgtatttgaacccagtcatttcttaaagtcttggaacaaatttatt
attgtaaattttttaattttaaattattgtaaattattgtaagttggtca
aaatttatgttcatcgtacatactgcaaatggtaaaagttgaacgctgag
tgtctggggatctcatgtgactctagtttagatccacacaacatgtgact
cagtcatctagttcttcgtcaactgaggtcaagagctatgtgactcccga
tcgacgcacttgctcatggcatgacggtgttagcttggcttcaggctag
gaattccagcacaatgaaagagcctgtcccaagcaagaacatagccgaaa
gtgaataaggaagacttctaaagtcaaactctggtctttacgcacacttc
cagagacatgtacatgcccctacacgaacatttgcaagtacacaaaatga
ataaatataattaatagtattcatacatacatataacataatttgtgcat
tttaattggtcacttagctttttactgtttaaactctgaatactaaattc
tgtttaaatttctccttctgaagtgagacatagcttaaaccacaaggaaa
aaaatgtttcaaaaataaattctcttcaaatatacgttaagtgtatgctt
gcttccaggcaactaacagccatggatgaagaatggccaaagcttgttct
tggcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaatccacatgttag
aaaggcactctttcaatagacaatggtactgcagtaatatggagtgctcc
tggaggattgtggtaagtgtggaaagaagaccatgaaaaactcttctctg
cttcacagcctgttctctgtaagtagcaaaagaagaactcaggaactata
agtaccaaggggttttaaaagcactaactaataatgactattttgctata
aaccaatttatcctggggataaaaattttcatttctgacactatgtgagt
aaattaagctcacattttattggcttatttgacatgcacttctaattttg
gtaaatcagagaattttaagcattaaatctgtaagtttctatgtttagaa
cactctgtcttcttcttactcatctctgggtattgcagtttgagcctgaa
ctgcccccgagtgttgagcccccagcttgtacactcactattctggtggt
catggaacctttaggagaataaagcctgactatcagaaggaggtcatcag
aggcagattttgacttgttaagctgggtcctctgaatctagcctgctttc
cctgttttttttattaccatgtactcatcttctgtccaaacacccaggca
cccatgattgagatgcctctgatgtgtccacagactgccacaacagtctg
aatcaaattagtctcctagtctccacatcaggttgggcagacttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15197086_15198256
seq2: B6Ng01-319P03.b_50_1198 (reverse)

seq1  CTAGCCTGA--GCAAGCT-ACACGGTCATGGGCATGAGCAAGTTGCCTGT  47
      |||||||||   |||||| |||| ||||| | |||||||||| |||  ||
seq2  CTAGCCTGAAGCCAAGCTAACACCGTCAT-GCCATGAGCAAG-TGC--GT  46

seq1  CGTATTCTGTGAGTTCACATACCCTCCTTTGACTTCAGTTTTAAAGGAAA  97
      || ||   | ||| |||||||  |||  ||||| ||||||    | ||| 
seq2  CG-AT--CGGGAG-TCACATA-GCTC--TTGACCTCAGTT---GACGAA-  85

seq1  GGAACTAGATGACTGAGTTCACCATGTTGTGTGATTCTAAACTAGAGTTC  147
       |||||||||||||||| ||| |||||||||||  |||||||||||| ||
seq2  -GAACTAGATGACTGAG-TCA-CATGTTGTGTGGATCTAAACTAGAG-TC  131

seq1  ACATTGAGATCCCCAGACACTCAGCCTTTCAACTTTTACCATTTTGCAGT  197
      ||| |||||||||||||||||||| | |||||||||||||| ||||||| 
seq2  ACA-TGAGATCCCCAGACACTCAG-CGTTCAACTTTTACCA-TTTGCAG-  177

seq1  TATGTACGATGAACATAAATTTTGACCAACTTTACAATAATTTACAATAA  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATGTACGATGAACATAAATTTTGACCAAC-TTACAATAATTTACAATAA  226

seq1  TTTAAAATTTAAAAAATTTACAATAATAAATTTGTTCCAAGACTTTAAGA  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAA-TTAAAAAATTTACAATAATAAATTTGTTCCAAGACTTTAAGA  275

seq1  AATGACTGGGTTCAAATACATGACCAAGTTGCGTTGCCTTGAGCTTGGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGGGTTCAAATACATGACCAAGTTGCGTTGCCTTGAGCTTGGTT  325

seq1  GCTCAGAACAGTGAGTTAATTCTGGACTTTGACGGGTCCTTTGTAGCGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAACAGTGAGTTAATTCTGGACTTTGACGGGTCCTTTGTAGCGGA  375

seq1  TCTCACCTTTTCCTGGCCTGACCCCACAGCATGATGATGGTGTGGCAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTTTTCCTGGCCTGACCCCACAGCATGATGATGGTGTGGCAGTA  425

seq1  GGAGAGAGTAGAGCAGCTAGCATAGACTTAATGCCTCTGGTACTTGGCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGTAGAGCAGCTAGCATAGACTTAATGCCTCTGGTACTTGGCAT  475

seq1  GCTGTCCACACACCAAGTGTTAATCAAGCCCGAGTCCTGTGAGCATTGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCACACACCAAGTGTTAATCAAGCCCGAGTCCTGTGAGCATTGCC  525

seq1  TCCTGACAGACACTTCAGTCTAGCCTACTACCTCTGCTGTGATTCAGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAGACACTTCAGTCTAGCCTACTACCTCTGCTGTGATTCAGGAA  575

seq1  CCTTTACCAAATGTCCCTGCTTTTTGCTTCAGGCTAACATTCTCCCATCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCAAATGTCCCTGCTTTTTGCTTCAGGCTAACATTCTCCCATCT  625

seq1  TTATCGAAAAGTGAACTCTGCAATACAAATATGATTTGATTATTTCCCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGAAAAGTGAACTCTGCAATACAAATATGATTTGATTATTTCCCTT  675

seq1  TGTGAATCCTCAGGTAAGTTTTCTTTCCCCTGAGAATGGATTGTATCTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATCCTCAGGTAAGTTTTCTTTCCCCTGAGAATGGATTGTATCTAC  725

seq1  CCTTGACTAGTTCTTTCTTTACCATCTATAGTGAGTGGCAATGCACCTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACTAGTTCTTTCTTTACCATCTATAGTGAGTGGCAATGCACCTTT  775

seq1  TGATGTCTTCATTTATTTAATCCTTGGCACCCTTAGAAGTAGACACTATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTTCATTTATTTAATCCTTGGCACCCTTAGAAGTAGACACTATT  825

seq1  TAAATTTAGCAAATGAAATCCTGTCTCTACTAGAAACTTCAGGTTTCACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAGCAAATGAAATCCTGTCTCTACTAGAAACTTCAGGTTTCACT  875

seq1  TTTCTCAGTTTCCAGGTAAAAGGAGCTCTAGACCAGTAAAGAAGGACTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTTTCCAGGTAAAAGGAGCTCTAGACCAGTAAAGAAGGACTGT  925

seq1  TGGTACTGAGTACAGGAGAGACAGTTCTTAAAGACTACCCTCTTCTAGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTGAGTACAGGAGAGACAGTTCTTAAAGACTACCCTCTTCTAGAA  975

seq1  GAAAGACTTTGATCAGTCCATTCAGACCATCGCACCCTGCACCTTACACC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACTTTGATCAGTCCATTCAGACCATCGCACCCTGCACCTTACACC  1025

seq1  ATTCTTGTGATAGCTGCTCTGTGAGGTCCTCCTTAAAAACTGCATTTTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTGATAGCTGCTCTGTGAGGTCCTCCTTAAAAACTGCATTTTAA  1075

seq1  AGTTACTTCCAATAAAATGGTAGTCTTGATCTCAAAGGCCTACATGATTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTCCAATAAAATGGTAGTCTTGATCTCAAAGGCCTACATGATTG  1125

seq1  TGGTTTGTATGGGTAATGGAATTC  1171
      ||||||||||||||||||||||||
seq2  TGGTTTGTATGGGTAATGGAATTC  1149

seq1: chr4_15083532_15084678
seq2: B6Ng01-319P03.g_71_1216

seq1  GAATTCCAGCACAATGAAAGAGCCTGTCCCAAGCAAGAACATAGCCGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACAATGAAAGAGCCTGTCCCAAGCAAGAACATAGCCGAAA  50

seq1  GTGAATAAGGAAGACTTCTAAAGTCAAACTCTGGTCTTTACGCACACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAGGAAGACTTCTAAAGTCAAACTCTGGTCTTTACGCACACTTC  100

seq1  CAGAGACATGTACATGCCCCTACACGAACATTTGCAAGTACACAAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACATGTACATGCCCCTACACGAACATTTGCAAGTACACAAAATGA  150

seq1  ATAAATATAATTAATAGTATTCATACATACATATAACATAATTTGTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATAATTAATAGTATTCATACATACATATAACATAATTTGTGCAT  200

seq1  TTTAATTGGTCACTTAGCTTTTTACTGTTTAAACTCTGAATACTAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGTCACTTAGCTTTTTACTGTTTAAACTCTGAATACTAAATTC  250

seq1  TGTTTAAATTTCTCCTTCTGAAGTGAGACATAGCTTAAACCACAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAATTTCTCCTTCTGAAGTGAGACATAGCTTAAACCACAAGGAAA  300

seq1  AAAATGTTTCAAAAATAAATTCTCTTCAAATATACGTTAAGTGTATGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTCAAAAATAAATTCTCTTCAAATATACGTTAAGTGTATGCTT  350

seq1  GCTTCCAGGCAACTAACAGCCATGGATGAAGAATGGCCAAAGCTTGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGGCAACTAACAGCCATGGATGAAGAATGGCCAAAGCTTGTTCT  400

seq1  TGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCCACATGTTA  450
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCCACATGTTA  449

seq1  GAGAGGCACTCTTTCAATAGACAATGGTACTGCAGTAATATGGAGTGCTC  500
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCACTCTTTCAATAGACAATGGTACTGCAGTAATATGGAGTGCTC  499

seq1  CTGGAGGATTGTGGTAAGTGTGGAAAGAAGACCATGAAAAACTCTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGATTGTGGTAAGTGTGGAAAGAAGACCATGAAAAACTCTTCTCT  549

seq1  GCTTCACAGCCTGTTCTCTGTAAGTAGCAAAAGAAGAACTCAGGAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACAGCCTGTTCTCTGTAAGTAGCAAAAGAAGAACTCAGGAACTAT  599

seq1  AAGTACCAAGGGGTTTTAAAAGCACTAACTAATAATGACTATTTTGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCAAGGGGTTTTAAAAGCACTAACTAATAATGACTATTTTGCTAT  649

seq1  AAACCAATTTATCCTGGGGATAAAAATTTTCATTTCTGACACTATGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATTTATCCTGGGGATAAAAATTTTCATTTCTGACACTATGTGAG  699

seq1  TAAATTAAGCTCACATTTTATTGGCTTATTTGACATGCACTTCTAA-TTT  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAAATTAAGCTCACATTTTATTGGCTTATTTGACATGCACTTCTAATTTT  749

seq1  GGTAAATCAGAGAATTTTAAGCATTAAATCTGTAAGTTTCTATGTTTAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCAGAGAATTTTAAGCATTAAATCTGTAAGTTTCTATGTTTAGA  799

seq1  ACACTCTGTCTTCTTCTTACTCATCTCTGGGTATTGCAGTTTGAGCCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGTCTTCTTCTTACTCATCTCTGGGTATTGCAGTTTGAGCCTGA  849

seq1  ACTGCCCCCGAGTGTTGAGCCCCCAGCTTGTACACTCACTATTCTGGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCCCGAGTGTTGAGCCCCCAGCTTGTACACTCACTATTCTGGTGG  899

seq1  TCATGGAACCTTTAGGAG-ATAAAGCCTGACTATCAGAAGAAGGTCATCA  948
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  TCATGGAACCTTTAGGAGAATAAAGCCTGACTATCAGAAGGAGGTCATCA  949

seq1  GAAGCAGATTTTGAC-TGTTAAGCTGG--TCTCTGATTCTAGCCTGC-TT  994
      || |||||||||||| |||||||||||   |||||| |||||||||| ||
seq2  GAGGCAGATTTTGACTTGTTAAGCTGGGTCCTCTGAATCTAGCCTGCTTT  999

seq1  CCCTG--TTTTTTATTACCATGTACTCATCTTCTGT-CAAACACCCAGGC  1041
      |||||  ||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCTGTTTTTTTTATTACCATGTACTCATCTTCTGTCCAAACACCCAGGC  1049

seq1  CACCATGAATTGAGATG-CTCTGATGTGT-CACAGAACTGCCAC-ACAGT  1088
        ||||| ||||||||| ||||||||||| ||||| |||||||| |||||
seq2  ACCCATG-ATTGAGATGCCTCTGATGTGTCCACAG-ACTGCCACAACAGT  1097

seq1  CTGAAATCAAAATAAGTCTTCTTTATGTTTTTTCAACAATACAGTGTGGG  1138
      ||| |||| |||| ||||| |      |  | || |||   |||  ||||
seq2  CTG-AATC-AAATTAGTCTCC------TAGTCTCCACA--TCAGGTTGGG  1137

seq1  CAGACTTCC  1147
      |||||||||
seq2  CAGACTTCC  1146