BAC Information

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BAC

Clone NameB6Ng01-320C17
Chromosome4 (Build37)
Map Location 68,487,011 - 68,488,155
singlet/doubletsinglet
Overlap geneDbc1
Upstream geneLOC433715, Tcp1-ps1
Downstream geneLOC622491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320C17.bB6Ng01-320C17.g
ACCGA109612GA109613
length1,1941,144
definitionB6Ng01-320C17.b B6Ng01-320C17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatctttcatctgtcaaaatggctgagatcattagctcatatgac
agctcttgccagccaagatgtaaatcaaggagaacagttctccaacactg
gtgggaggacaacattgtactctaaacattgtgtcttttgtttgccaggt
gtcattgccaccttggaggcttacagctaaataagctccccctttctagc
tctttagaaactctggaaggctggttcaattcagtttttctggctcaaac
tcctctccaagctgcctgattcaaactggcttctttcagcttctcactga
attgctctgcttgatctcaaatcaactaggatgagttgatctaatcttct
ggctgcttcttattctctgtatcaaactgcctgtgctgacatgctctgaa
ctgtataaatgcacagcaaactaaactccactacattgccctcactgcag
tgactccaactgacagaatctctctccctcaacttctctaaatagcttcc
ctttcctttgtgttcatgtgttaactgcacatgtcctatctctgtttcat
tatttcaaatcttttttcattgttactttgtccaccccctcaatcagata
tcactgtttatgtatactaagagcatgtctgtattccagccagaaggatt
aaagatgtgtcgcatgtctccattccagccgaacacattacacaggaggg
ctttgggtgcaatcagaacagccttgtggctggattaaaattcctcaaca
ttgtaaagctgctttggaatcaatacaatgtttccctgaaaattggaaaa
ttttctacctcaagatcctgcattaccactttgggcatattccaaaagga
tattccttcctactacagggtcacttacttaactatgtttgtagtgactt
tattcatattagccagaaactgagaatttgctagcaaatttcatgcaact
agaaaaaaaataccaagtgatttaaaccagacctaaaagacgatatgcta
tatatttacttataagtggtattagctttagaaaaatgatatcatttata
atgccacagaccaagagagaggtaaagaggagggttttagaagatacatg
acttcctgggaagagaatgtattttctagagacttgttgtagttgaaaca
ggactgcagatcgcattgccagcaagacctgggatgacgagctg
gaattctttttgcctagtaaaagcacccatatactcattgccatttatag
aggcgttttgtaatcaactggccatttctgaagactccctgtgccaggca
cttctggaaccatcttagatgtagaattacttttttagggtatgctataa
gcaaaccagccttcctaacttacacccctctcacttaatttccactctag
gtcacagaaacacgcactgggcctctgggctgtaacagctatgacaatct
ggactctgtgagttctgtccttctgcaaagcacggagagcaaactgcacc
ttcaaggtaggaaactgacgcaaaatgcgtcaggactagatgttcgtagg
ggttaataattgtaccagacaggaccagtaagaatgaggcacaaggagaa
tagggaagagggaaaaaacagaataaaataaaataaaacttagaaataat
gaaatcaggcaggtgtgaattgatccataagaattttaacatgaacagag
cattaaaatatggttattaattagttctctgaaaaaaaatgaaaatatga
gctctatctgattactttgataaaaatgtctgaactgcattatttttaga
tgcctgatgccccagacatactatatattaaagtttcatatcttatcatc
ttattaatttgatttctagtgtgttttggaaagtgatgtctaaatctcaa
gcaaacaaataatattctctgtaatttcttccttattttggctcatcatc
tgtggtttttttaataaaaagatgaatgcgtattttatagagttaagaac
tagaaatgctcagtgctggttggtatctagaaagatacatttggacatga
cctttaatagcgtaaccattatgggggattaattttttaatttttgtaaa
tgtttcagtttgctttgtcaatttaatgagtaaatttacactttttaaat
ttatatcacagagaggaaaggagatatatatatatatatatctcctgatg
tggtaataaacaatatatgctttctgtaacttttttgagatatagtacca
tacatcacaccccttcctttcctttatatatttttgaacactataaatgg
atctcagtcttaaatgtgaatgtaggtgcttttattctctcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68487011_68488155
seq2: B6Ng01-320C17.g_66_1209 (reverse)

seq1  TGTGAGA----TAAAGCACCTACATTTCACATATAGAAATTGAGATCATT  46
      |||||||     |||||||||||| ||||||| || | | |||||||  |
seq2  TGTGAGAGAATAAAAGCACCTACA-TTCACATTTA-AGACTGAGATCCAT  48

seq1  TTATAGTGTTTAAAAATATATAAAGGAAAGGAAAGGGGTTGTGATGTAAT  96
      |||||||||| ||||||||||||||||||||||  ||| |||||||| ||
seq2  TTATAGTGTTCAAAAATATATAAAGGAAAGGAA--GGGGTGTGATGT-AT  95

seq1  TGTACTATAATCTC-AAAAAGTTACAGAAAGCATATATTGTTTATTACAA  145
       ||||||| ||||| ||||||||||||||||||||||||||||||||| |
seq2  GGTACTAT-ATCTCAAAAAAGTTACAGAAAGCATATATTGTTTATTACCA  144

seq1  CATCAGGAGATATATATATATATATATCTCCTTTCCTCTCTGTGATATAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGAGATATATATATATATATATCTCCTTTCCTCTCTGTGATATAA  194

seq1  A-TTAAAAAGTGTAAATTTACTCATTTAAATTTGACAAAGCAAACTGAAA  244
      | ||||||||||||||||||||||||  || |||||||||||||||||||
seq2  ATTTAAAAAGTGTAAATTTACTCATT--AAATTGACAAAGCAAACTGAAA  242

seq1  CATTTACAAAAATTAAAAAATTAAT-CCCCATAATGGTTACGCTATTAAA  293
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTTACAAAAATTAAAAAATTAATCCCCCATAATGGTTACGCTATTAAA  292

seq1  GGTCATGTCCAAATGTATCTTTCTAGATACCAACCAGCACTGAGCATTTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGTCCAAATGTATCTTTCTAGATACCAACCAGCACTGAGCATTTC  342

seq1  TAGTTCTTAACTCTATAAAATACGCATTCATCTTTTTATTAAAAAAACCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTAACTCTATAAAATACGCATTCATCTTTTTATTAAAAAAACCA  392

seq1  CAGATGATGAGCCAAAATAAGGAAGAAATTACAGAGAATATTATTTGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGATGAGCCAAAATAAGGAAGAAATTACAGAGAATATTATTTGTTT  442

seq1  GCTTGAGATTTAGACATCACTTTCCAAAACACACTAGAAATCAAATTAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGATTTAGACATCACTTTCCAAAACACACTAGAAATCAAATTAAT  492

seq1  AAGATGATAAGATATGAAACTTTAATATATAGTATGTCTGGGGCATCAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATAAGATATGAAACTTTAATATATAGTATGTCTGGGGCATCAGG  542

seq1  CATCTAAAAATAATGCAGTTCAGACATTTTTATCAAAGTAATCAGATAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAAATAATGCAGTTCAGACATTTTTATCAAAGTAATCAGATAGA  592

seq1  GCTCATATTTTCATTTTTTTTCAGAGAACTAATTAATAACCATATTTTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATTTTCATTTTTTTTCAGAGAACTAATTAATAACCATATTTTAA  642

seq1  TGCTCTGTTCATGTTAAAATTCTTATGGATCAATTCACACCTGCCTGATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTTCATGTTAAAATTCTTATGGATCAATTCACACCTGCCTGATT  692

seq1  TCATTATTTCTAAGTTTTATTTTATTTTATTCTGTTTTTTCCCTCTTCCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTCTAAGTTTTATTTTATTTTATTCTGTTTTTTCCCTCTTCCC  742

seq1  TATTCTCCTTGTGCCTCATTCTTACTGGTCCTGTCTGGTACAATTATTAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCCTTGTGCCTCATTCTTACTGGTCCTGTCTGGTACAATTATTAA  792

seq1  CCCCTACGAACATCTAGTCCTGACGCATTTTGCGTCAGTTTCCTACCTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACGAACATCTAGTCCTGACGCATTTTGCGTCAGTTTCCTACCTTG  842

seq1  AAGGTGCAGTTTGCTCTCCGTGCTTTGCAGAAGGACAGAACTCACAGAGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCAGTTTGCTCTCCGTGCTTTGCAGAAGGACAGAACTCACAGAGT  892

seq1  CCAGATTGTCATAGCTGTTACAGCCCAGAGGCCCAGTGCGTGTTTCTGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTGTCATAGCTGTTACAGCCCAGAGGCCCAGTGCGTGTTTCTGTG  942

seq1  ACCTAGAGTGGAAATTAAGTGAGAGGGGTGTAAGTTAGGAAGGCTGGTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGTGGAAATTAAGTGAGAGGGGTGTAAGTTAGGAAGGCTGGTTT  992

seq1  GCTTATAGCATACCCTAAAAAAGTAATTCTACATCTAAGATGGTTCCAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGCATACCCTAAAAAAGTAATTCTACATCTAAGATGGTTCCAGA  1042

seq1  AGTGCCTGGCACAGGGAGTCTTCAGAAATGGCCAGTTGATTACAAAACGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGCACAGGGAGTCTTCAGAAATGGCCAGTTGATTACAAAACGC  1092

seq1  CTCTATAAATGGCAATGAGTATATGGGTGCTTTTACTAGGCAAAAAGAAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAATGGCAATGAGTATATGGGTGCTTTTACTAGGCAAAAAGAAT  1142

seq1  TC  1145
      ||
seq2  TC  1144