BAC Information

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BAC

Clone NameB6Ng01-320F10
Chromosome4 (Build37)
Map Location 87,118,276 - 87,119,349
singlet/doubletsinglet
Overlap genenone
Upstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
Downstream geneMllt3, BC057079, Ptplad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320F10.bB6Ng01-320F10.g
ACCGA109732GA109733
length1,2071,094
definitionB6Ng01-320F10.b B6Ng01-320F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactggggaataccaaatgctgagaagcacctgaaaaaatgt
tcaacatccttagtcatcaggaaaatgcaaatcaaacaaccctgagattc
cacctcacactagtcagaatggctgagatcaaagactcaggtgacagcag
atgctggcaaggatgtggagaaagaggaacactcctccattgctggtggg
attgcaagctggtacaatcactctggaaatcaggttgacggttcctcaga
aaattggacaccatactacctgaggacccagcaataccactcctgggcat
atacccagaagatgctccaacatgtaataaggacacatgctccactatgt
tcatagtagctttatttataataggcagaagctggaaaggacctagatgt
ccctcaacagaagaatagatacagaaaatgtggtacatttgtacaataga
gtactactcagccattcaaaactataaatttatgaaattcttaagcaaat
tgatggatctggaggattttatccttagtgatgtaacacaatcacaaaag
aacacacatgatatgcactcactgataagtcgatattagctcagaagccc
agaagctcggaatagccatgatacaattcacaaacatgaaactcaagaag
gagaccatagtgtagatacttctattcatcttagaaagggggaacaaaac
acccatggaagtagttacagagacaaagtgtggagtagagactgaagaaa
tgaccatctagagactgactcacctggggatccatctcatttacaatcac
caaacctagaaactgttgtggatgccaagaagtgcttgctgacaggaacc
tgatatagccctgccagtacctgacaaatacagaagtggatgctcacaac
catccattggactgagcatagggtccccaatgaaaggagctagagaaagg
acctaagaagctgaaggggtttgcagtcccataggaggaacacacatgaa
ctaccagtacccccagagctccagggactaaccaccaccaagagcacaca
catggtgggactcgtggctctagctgcattatgtagtagagatgtctagc
aagtcatccatgggaggaaagacctggttctgtgaggtttctatggccat
gtaaggatgctagaacaggaattggaagtggactgggcttggggtgaact
cgagtca
gaattcagtttgcatgcacaccttgggtgtcgagacccttagctctacaa
ctactacggtaattccatcagtctgggagttaagtttacttagctctagg
cagcagctggccttgtagcttctgggtgggtcaaggtatcaggattccct
aacctttaacaacggccagtgttagagaggtccttggcactaaggcgtgg
caacctccggaagttcttccagtgatcggagccttcagttggccttttcc
aactctatacagccttctagcttgtttctgctccttctgccaccccattg
ttctgtctgccctgtcttaaaaggctcatcagcctctccttcagctgcct
gtcatgcacttctgctgcttagtgagaaaagctcttagctactgcaaaac
cggaagaggcagcatagtggagtctcccagccaactcactaaggaagtct
aagtggcctacttgtatagatggtgtttgtactaatcagcacacttcaca
tgcaaatgaaggtttgttgcaccaaacactgccttgcctctttagcccaa
gtcacagcagtctctctgctctgccaccaggaggaacatacccattttga
cctgtatggaaatgattttagggtcatccagagttcatcaaggcttgtaa
cagtcctggcacaatctattaaatgtggtcaaggctgaggcggggcagtc
agctgtggtccttgtttggtttttctcaagatatccactgagcattcaag
atggctggtgttggtataagcctgctctgacagctgctaatcaggaagtt
gaatttaccagcctccaacatgtttgcttattcgcaggaaaataaacaca
ggaaggagtccttataaatgagatctaagccttatttattaacactaaat
gattttggcagggcttttcacaaacactttaacatcttcagtgtcccagg
ggagaggtggtcccttgtatggtctcttctgcttcatcaacagccattct
ctttctgttaactaacaaattgtagcttaagaaataaaggagtctcgccg
agttcctctttctacagaaacacgaatccggttcattggtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_87118276_87119349
seq2: B6Ng01-320F10.g_69_1162 (reverse)

seq1  AGCCACC-ATGAACGGGATTCGTG-TTCTGTA-AAAGAG--ACTC-GCGA  44
      ||||||| |||||| ||||||||| ||||||| ||||||  |||| ||||
seq2  AGCCACCAATGAACCGGATTCGTGTTTCTGTAGAAAGAGGAACTCGGCGA  50

seq1  GAACTCCTTTA-TTCTTTAGCTACAATGTG-TAGTT-ACAGAAAGAG-AT  90
      | ||||||||| ||||| ||||||||| || ||||| |||||||||| ||
seq2  G-ACTCCTTTATTTCTTAAGCTACAATTTGTTAGTTAACAGAAAGAGAAT  99

seq1  GGCTGTTGATGAAGCAG-AGAGA-CATACAAGGGACCACCTCT-CCCTGG  137
      ||||||||||||||||| ||||| ||||||||||||||||||| ||||||
seq2  GGCTGTTGATGAAGCAGAAGAGACCATACAAGGGACCACCTCTCCCCTGG  149

seq1  GACACTG-AGATGTT-AAGTG-TTGTG-AAAGCCCTGCCAAAATCA-TTA  182
      ||||||| ||||||| ||||| ||||| |||||||||||||||||| |||
seq2  GACACTGAAGATGTTAAAGTGTTTGTGAAAAGCCCTGCCAAAATCATTTA  199

seq1  GTGTTAAT-AATAA-GCTTAGATCTCA-TTATAAGGACTCCTTCCTGTGT  229
      |||||||| ||||| |||||||||||| ||||||||||||||||||||||
seq2  GTGTTAATAAATAAGGCTTAGATCTCATTTATAAGGACTCCTTCCTGTGT  249

seq1  TTATTTTCCTGCGAATAAGCAAACATGTTGGAGGCTGGTAAATTCAACTT  279
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCTGCGAATAAGCAAACATGTTGGAGGCTGGTAAATTCAACTT  299

seq1  CCTGATTAGCAGCTGTCAGAGCAGGCTTATACCAACACCAGCCATCTTGA  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTAGCAGCTGTCAGAGCAGGCTTATACCAACACCAGCCATCTTGA  349

seq1  ATGCTCAGTGGATATCTTGAGAAAAACCAAACAAGGACCACAGCTGACTG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGTGGATATCTTGAGAAAAACCAAACAAGGACCACAGCTGACTG  399

seq1  CCCCGCCTCAGCCTTGACCACATTTAATAGATTGTGCCAGGACTGTTACA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCCTCAGCCTTGACCACATTTAATAGATTGTGCCAGGACTGTTACA  449

seq1  AGCCTTGATGAACTCTGGATGACCCTAAAATCATTTCCATACAGGTCAAA  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGATGAACTCTGGATGACCCTAAAATCATTTCCATACAGGTCAAA  499

seq1  ATGGGTATGTTCCTCCTGGTGGCAGAGCAGAGAGACTGCTGTGACTTGGG  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTATGTTCCTCCTGGTGGCAGAGCAGAGAGACTGCTGTGACTTGGG  549

seq1  CTAAAGAGGCAAGGCAGTGTTTGGTGCAACAAACCTTCATTTGCATGTGA  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAGGCAAGGCAGTGTTTGGTGCAACAAACCTTCATTTGCATGTGA  599

seq1  AGTGTGCTGATTAGTACAAACACCATCTATACAAGTAGGCCACTTAGACT  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTGATTAGTACAAACACCATCTATACAAGTAGGCCACTTAGACT  649

seq1  TCCTTAGTGAGTTGGCTGGGAGACTCCACTATGCTGCCTCTTCCGGTTTT  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTGAGTTGGCTGGGAGACTCCACTATGCTGCCTCTTCCGGTTTT  699

seq1  GCAGTAGCTAAGAGCTTTTCTCACTAAGCAGCAGAAGTGCATGACAGGCA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGCTAAGAGCTTTTCTCACTAAGCAGCAGAAGTGCATGACAGGCA  749

seq1  GCTGAAGGAGAGGCTGATGAGCCTTTTAAGACAGGGCAGACAGAACAATG  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGAGAGGCTGATGAGCCTTTTAAGACAGGGCAGACAGAACAATG  799

seq1  GGGTGGCAGAAGGAGCAGAAACAAGCTAGAAGGCTGTATAGAGTTGGAAA  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCAGAAGGAGCAGAAACAAGCTAGAAGGCTGTATAGAGTTGGAAA  849

seq1  AGGCCAACTGAAGGCTCCGATCACTGGAAGAACTTCCGGAGGTTGCCACG  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAACTGAAGGCTCCGATCACTGGAAGAACTTCCGGAGGTTGCCACG  899

seq1  CCTTAGTGCCAAGGACCTCTCTAACACTGGCCGTTGTTAAAGGTTAGGGA  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTGCCAAGGACCTCTCTAACACTGGCCGTTGTTAAAGGTTAGGGA  949

seq1  ATCCTGATACCTTGACCCACCCAGAAGCTACAAGGCCAGCTGCTGCCTAG  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATACCTTGACCCACCCAGAAGCTACAAGGCCAGCTGCTGCCTAG  999

seq1  AGCTAAGTAAACTTAACTCCCAGACTGATGGAATTACCGTAGTAGTTGTA  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTAAACTTAACTCCCAGACTGATGGAATTACCGTAGTAGTTGTA  1049

seq1  GAGCTAAGGGTCTCGACACCCAAGGTGTGCATGCAAACTGAATTC  1074
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGGGTCTCGACACCCAAGGTGTGCATGCAAACTGAATTC  1094