BAC Information

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BAC

Clone NameB6Ng01-320G24
Chromosome4 (Build37)
Map Location 139,264,147 - 139,461,830
singlet/doubletdoublet
Overlap genePax7
Upstream geneUbxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1, C79267, Aldh4a1, Tas1r2
Downstream geneGm1667, Klhdc7a, Igsf21, LOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320G24.bB6Ng01-320G24.g
ACCGA109803GA109804
length8691,103
definitionB6Ng01-320G24.b B6Ng01-320G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,461,307 - 139,461,830)(139,264,147 - 139,265,252)
sequence
gaattccagtcagtcctctaaacgagcagggagcactctcagtcactgga
ccatctctctcgctcgcccttcggtgataactttcatctgaaaagagtca
caaaccattgtttgtgtacttggctgcgccaaggcaaacgattctacacc
ctcgtccctgcaggaggcccctcatccctcggacagtgccttcctcttcc
gcttcccttacatagacacttacactcacacctctccctggccagccatc
cccagagccaattagagaggccaggtggccctgggggaacccttggggat
gacggagggaggcatcgatcagctgaagtagcagatgtcaagtagaacag
aagagtccgctccaccgctctctttctcagagggcagcggggacaaggtg
gtagagatgaagctgtatttactgtgatggtaattgaaaggcagccgtgg
ccaccccacgctgtccccgctgatacctaattgctggaccaaaatctgct
ggagaaggggacgggggggggaggctcttgcaactgcttctttataagtg
ctttgagctcaaaataatccttaggtttaactggcataatttggggttca
ggaagtatattctctcaccttttgtggtttttttttttttttttaaatat
agctctggatcaggagactcttaacagtaggtattgccagatttggcctt
cttatattttgtggatgcttaaagcatttagaaaatcctttctttttggt
aaaaccttcttattgaagtctctaatcttattgtagtatcaaaatatgat
cctatactttaatatgtggtgattgaggcttttctttacttttatattcc
atttctgatcctgaaattt
gaattcactctgtcgaccaggctggccttgaactcacaaagatctgcctg
cttctgcctagggctctggatccactcattggtggaaagtgaggtatagc
ctgagccaggtgacatcagctctcacttccctgcgtgtaaatgaggatga
tagactgagagagcaacacatgccaaaggcctggggcacaaaccagccct
aggtgcgaggtgggtgggtataggataagatagagctgcgatctgtgtgg
actgcaatggctactgtgactgagttactgctgccccctcaatactctgc
tcccagtccagcctgggcactgcctgtcactctaaaccccatctttcctg
agggcaccaccactgtcctctcccgctctgctctgatgcctaacctggct
ttatcaccaggagctgatgaacgaaaacatcaggcttccccaacactgcc
ccgggaccttgtctctctcccagatgtggcctcccatttttcctcccaca
gctcccagatcactcatgacttcctcacactggaatagaggcaccacagg
ccccagatttctgcttgtcttgttcctagatgagtcctcagtttctagaa
cactcctgatctctgtgaacgctttcatgagtccacatgtcagagaagtg
agacaatactccaggctgcaagccagacccaactcctcctatcagctcta
agcccgcagaagtatctccatccgaaagcattgggtggggtcgggggctg
tggctcatttgagattgtgactgtccgtaggtgtggtccacagcactgca
gagagacgaggtgtgacagttcactcctctcaccccatcactctttactt
agaggcaggtgcattatgccttaaggccagcctacatctgaatagcacat
aacagggcgaccttcagctacataaagatcgtagtatgagaacaaacagg
catacgagcgcgccaccaacgaagagaggtaatgtgcagaatattaatcc
tgatgcttggagacgcaccagatggactctgtgagtcaagtcagcctggt
ctaccatagtgaagtcggagaaacaggcaagaatatcacagtgagatcat
gtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_139461307_139461830
seq2: B6Ng01-320G24.b_43_566 (reverse)

seq1  CCTCCCCCCCCCGTCCCCTTCTCCAGCAGATTTTGGTCCAGCAATTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCCCCGTCCCCTTCTCCAGCAGATTTTGGTCCAGCAATTAGGT  50

seq1  ATCAGCGGGGACAGCGTGGGGTGGCCACGGCTGCCTTTCAATTACCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCGGGGACAGCGTGGGGTGGCCACGGCTGCCTTTCAATTACCATCA  100

seq1  CAGTAAATACAGCTTCATCTCTACCACCTTGTCCCCGCTGCCCTCTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATACAGCTTCATCTCTACCACCTTGTCCCCGCTGCCCTCTGAGA  150

seq1  AAGAGAGCGGTGGAGCGGACTCTTCTGTTCTACTTGACATCTGCTACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCGGTGGAGCGGACTCTTCTGTTCTACTTGACATCTGCTACTTC  200

seq1  AGCTGATCGATGCCTCCCTCCGTCATCCCCAAGGGTTCCCCCAGGGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATCGATGCCTCCCTCCGTCATCCCCAAGGGTTCCCCCAGGGCCAC  250

seq1  CTGGCCTCTCTAATTGGCTCTGGGGATGGCTGGCCAGGGAGAGGTGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTCTAATTGGCTCTGGGGATGGCTGGCCAGGGAGAGGTGTGAG  300

seq1  TGTAAGTGTCTATGTAAGGGAAGCGGAAGAGGAAGGCACTGTCCGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGTCTATGTAAGGGAAGCGGAAGAGGAAGGCACTGTCCGAGGGA  350

seq1  TGAGGGGCCTCCTGCAGGGACGAGGGTGTAGAATCGTTTGCCTTGGCGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCCTCCTGCAGGGACGAGGGTGTAGAATCGTTTGCCTTGGCGCA  400

seq1  GCCAAGTACACAAACAATGGTTTGTGACTCTTTTCAGATGAAAGTTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTACACAAACAATGGTTTGTGACTCTTTTCAGATGAAAGTTATCA  450

seq1  CCGAAGGGCGAGCGAGAGAGATGGTCCAGTGACTGAGAGTGCTCCCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGGGCGAGCGAGAGAGATGGTCCAGTGACTGAGAGTGCTCCCTGCT  500

seq1  CGTTTAGAGGACTGACTGGAATTC  524
      ||||||||||||||||||||||||
seq2  CGTTTAGAGGACTGACTGGAATTC  524

seq1: chr4_139264147_139265252
seq2: B6Ng01-320G24.g_64_1166

seq1  GAATTCACTCTGTCGACCAGGCTGGCCTTGAACTCACAAAGATCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTCGACCAGGCTGGCCTTGAACTCACAAAGATCTGCCTG  50

seq1  CTTCTGCCTAGGGCTCTGGATCCACTCATTGGTGGAAAGTGAGGTATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCCTAGGGCTCTGGATCCACTCATTGGTGGAAAGTGAGGTATAGC  100

seq1  CTGAGCCAGGTGACATCAGCTCTCACTTCCCTGCGTGTAAATGAGGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCAGGTGACATCAGCTCTCACTTCCCTGCGTGTAAATGAGGATGA  150

seq1  TAGACTGAGAGAGCAACACATGCCAAAGGCCTGGGGCACAAACCAGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGAGAGAGCAACACATGCCAAAGGCCTGGGGCACAAACCAGCCCT  200

seq1  AGGTGCGAGGTGGGTGGGTATAGGATAAGATAGAGCTGCGATCTGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCGAGGTGGGTGGGTATAGGATAAGATAGAGCTGCGATCTGTGTGG  250

seq1  ACTGCAATGGCTACTGTGACTGAGTTACTGCTGCCCCCTCAATACTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAATGGCTACTGTGACTGAGTTACTGCTGCCCCCTCAATACTCTGC  300

seq1  TCCCAGTCCAGCCTGGGCACTGCCTGTCACTCTAAACCCCAGCTTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCCAGTCCAGCCTGGGCACTGCCTGTCACTCTAAACCCCATCTTTCCTG  350

seq1  AGGGCACCACCACTGTCCTCTCCCGCTCTGCTCTGATGCCTAGCCTGGCT  400
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGGCACCACCACTGTCCTCTCCCGCTCTGCTCTGATGCCTAACCTGGCT  400

seq1  TTATCAGCAGGAGCTGATGAACAAAAACATCAGGCTTCCCCAACACTGCC  450
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATCACCAGGAGCTGATGAACGAAAACATCAGGCTTCCCCAACACTGCC  450

seq1  CCGGGACCTTGTCTCTCTCCCAGATGTGGCCTCCCATTTTTCCTCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGACCTTGTCTCTCTCCCAGATGTGGCCTCCCATTTTTCCTCCCACA  500

seq1  GCTCCCAGATCACTCATGACTTCCTCACACTGGAATAGAGGCACCACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGATCACTCATGACTTCCTCACACTGGAATAGAGGCACCACAGG  550

seq1  CCCCAGATTTCTGCTTGTCTTGTTCCTAGATGAGTCCTCAGTTTCTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGATTTCTGCTTGTCTTGTTCCTAGATGAGTCCTCAGTTTCTAGAA  600

seq1  CACTCCTGATCTCTGTGAACGCTTTCATGAGTCCACATGTCAGAGAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGATCTCTGTGAACGCTTTCATGAGTCCACATGTCAGAGAAGTG  650

seq1  AGACAGTAGTCCAGGCTGCAAGCCAGACCCAGCTCCTCCTATCAGCTCTA  700
      ||||| || |||||||||||||||||||||| ||||||||||||||||||
seq2  AGACAATACTCCAGGCTGCAAGCCAGACCCAACTCCTCCTATCAGCTCTA  700

seq1  AGCCCGCAGAAGTATCTCCATCCGAAAGCATTGGGTGGGGCCTGGGGCTG  750
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  AGCCCGCAGAAGTATCTCCATCCGAAAGCATTGGGTGGGGTCGGGGGCTG  750

seq1  TGGCTCAGTTGATATTGTGCCTGTCC-TAGGTATGGTCCTCAGCACTGCA  799
      ||||||| |||| |||||| |||||| ||||| |||||| ||||||||||
seq2  TGGCTCATTTGAGATTGTGACTGTCCGTAGGTGTGGTCCACAGCACTGCA  800

seq1  AAGAGACCAGGTGTGGCAGTTCACACCTCTCACCCCAGCACTCTAGACTT  849
       |||||| ||||||| |||||||| |||||||||||| ||||||  ||||
seq2  GAGAGACGAGGTGTGACAGTTCACTCCTCTCACCCCATCACTCTTTACTT  850

seq1  AGAGGCAGGTGCATTTTGCGGTCAAGGCCACCCT-CATCTGAATAGCAAA  898
      ||||||||||||||| |||  | ||||||| ||| ||||||||||||| |
seq2  AGAGGCAGGTGCATTATGC-CTTAAGGCCAGCCTACATCTGAATAGCACA  899

seq1  T-TTAAGGCCACCTTGAGCTACAT-AAGATC-TAATTTAAAAACAAACAA  945
      |   | ||| ||||| |||||||| |||||| || | | | |||||||| 
seq2  TAACAGGGCGACCTTCAGCTACATAAAGATCGTAGTATGAGAACAAACAG  949

seq1  ACAAACAAACACACACACACAAACAGAAGAGAGGTTAATGGTGCAGATAT  995
       || || | | | |   ||| ||| ||||||||| |||| |||||||   
seq2  GCATACGAGCGCGC---CACCAAC-GAAGAGAGG-TAAT-GTGCAGAATA  993

seq1  TTAATCCTGATGCTTGGGAGACAGCAGCAGATGGACCTCTGTGAGTTCAA  1045
      ||||||||||||||| |||||| ||| |||||||| ||||||||| ||||
seq2  TTAATCCTGATGCTT-GGAGAC-GCACCAGATGGA-CTCTGTGAG-TCAA  1039

seq1  GGTCAGCCTGGTCTA-CATAGTG-AGTTGGAG-AACAGG-AAGAGATA-C  1090
       |||||||||||||| ||||||| ||| |||| |||||| |||| ||| |
seq2  -GTCAGCCTGGTCTACCATAGTGAAGTCGGAGAAACAGGCAAGA-ATATC  1087

seq1  ACAGTGAGATCCTGTC  1106
      ||||||||||| ||||
seq2  ACAGTGAGATCATGTC  1103