BAC Information

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BAC

Clone NameB6Ng01-320H07
Chromosome4 (Build37)
Map Location 87,397,126 - 87,398,264
singlet/doubletsinglet
Overlap genenone
Upstream geneDennd4c, Rps6, Asah3l, Slc24a2
Downstream geneMllt3, BC057079, Ptplad2, Ifnb1, OTTMUSG00000007655, Ifna14, Ifna9, Mrpl48-ps, Ifna12, C87499, Ifna13, LOC546834, OTTMUSG00000011275, Ifna2, Ifnab, LOC546835, Klhl9, LOC100040477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320H07.bB6Ng01-320H07.g
ACCGA109817GA109818
length1,1401,162
definitionB6Ng01-320H07.b B6Ng01-320H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgtgtcacattaaggtatatttagtccttcatctgccttgc
acatgaaggactttacaggagatagaaaggaacactcccaagtaattaaa
gtaagatgatgaaaatttcttagactgttatgattaatcttcattgtcaa
tctaacaagacttggaatcacctaggagatagacatgtctctcaaggagt
ttgcagagaggcaaaaggagggatagagatgtctcccaaggagtttgcag
agaggcaaaaggagggaacacataccaccccacaggtggcagatcctgat
cgaatcaaatgagaaaaaggaaaacccagcaaagcaacagcatttatccc
tctaccttttgactgtggacatagcatggccagctacatcatcttcctaa
gcccgtgctgtctctcccatgttaacaataccctcacactgtgccctgaa
atgaacctttctctaagttgctcttgtcaaatattttgtcagcaatgaaa
gatataactaatacagaaatgtagcaaaagtataatttcaaaaaagggaa
acaaaggagagatcaatatctcagtgtgggaattcttttcagtttaagat
ttttgtagctccagtttggatgtagggattggttgtcccctccccctgcg
tgttaaactctctattacttggctctcctggaggatggagaaacatttaa
gataagggccttgagggaggttgtaggtatagccaccttctgggggctta
gattctgttagggcaaaggattggctccaatcaaagaaagacaatttgcg
acatggaggcaactgctgttttcagaatcacagggcagacagttaaaatt
ctctccgtcatctaattcatttctattccatttcatctcacaaagaattg
aaaggcacccaaaaattgtcaaggaaatttcatatcttaaatgaccatat
ttccaaacaccataccacacacacagataagattagcaattttcccctgt
ctggttgagatacaaacatggctccttctgtctgttctcagctctcaggg
tatttgcatcccttagtacaaaagcatgggtcttctgcacacagtgcctg
gagctgggtgaaaacgaacctaaaatgtaccaagtatctg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgtgc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggat
caaaacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggccctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcatagggctcc
ccaatggaggagctagagaaagtagcccaagagcttaaagggtctacacc
tataggtggaacaacatatgaactacagtacccgagctctgactctagcc
tgcatatttatcaaagatgccctagtcgccatccacttgtaaagaaagcc
cattggacctgcactttaattggccccaattacaaggggcaaccctcagg
cccaaaaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_87397126_87398264
seq2: B6Ng01-320H07.b_44_1183 (reverse)

seq1  CAGATAC-TGGTACATTTTTGGTGTCGGTTTTTCA-CCAGCTCAAGGCAC  48
      ||||||| ||||||||||| ||| |||  |||||| ||||||| ||||||
seq2  CAGATACTTGGTACATTTTAGGT-TCG--TTTTCACCCAGCTCCAGGCAC  47

seq1  TGTGTGCAGAAGACCCATGC-TTTGTACTAAGGGATGGCAAAATACCCTG  97
      |||||||||||||||||||| ||||||||||||||||   ||||||||||
seq2  TGTGTGCAGAAGACCCATGCTTTTGTACTAAGGGATG--CAAATACCCTG  95

seq1  AGAGCTGAGAACAGACAGAAGGAGCCATGTTTGTATCTCAACCAGACAGG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAGAACAGACAGAAGGAGCCATGTTTGTATCTCAACCAGACAGG  145

seq1  GGAAAATTGCTAATCTTATCTGTGTGTGTGGTATGGTGTTTGG-AATATG  196
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAAAATTGCTAATCTTATCTGTGTGTGTGGTATGGTGTTTGGAAATATG  195

seq1  GTCATTTAAGATATG-AATTTCCTTGACAATTTTTGGGTGCC-TTCAATT  244
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  GTCATTTAAGATATGAAATTTCCTTGACAATTTTTGGGTGCCTTTCAATT  245

seq1  CTTTGTGAGATGAAATGGAATAGAAATGAATTAGATGACGGAGAGAATTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGAGATGAAATGGAATAGAAATGAATTAGATGACGGAGAGAATTT  295

seq1  TAACTGTCTGCCCTGTGATTCTGAAAACAGCAGTTGCCTCCATGTCGCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTCTGCCCTGTGATTCTGAAAACAGCAGTTGCCTCCATGTCGCAA  345

seq1  ATTGTCTTTCTTTGATTGGAGCCAATCCTTTGCCCTAACAGAATCTAAGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTTCTTTGATTGGAGCCAATCCTTTGCCCTAACAGAATCTAAGC  395

seq1  CCCCAGAAGGTGGCTATACCTACAACCTCCCTCAAGGCCCTTATCTTAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAAGGTGGCTATACCTACAACCTCCCTCAAGGCCCTTATCTTAAA  445

seq1  TGTTTCTCCATCCTCCAGGAGAGCCAAGTAATAGAGAGTTTAACACGCAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCCATCCTCCAGGAGAGCCAAGTAATAGAGAGTTTAACACGCAG  495

seq1  GGGGAGGGGACAACCAATCCCTACATCCAAACTGGAGCTACAAAAATCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGACAACCAATCCCTACATCCAAACTGGAGCTACAAAAATCTT  545

seq1  AAACTGAAAAGAATTCCCACACTGAGATATTGATCTCTCCTTTGTTTCCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAAGAATTCCCACACTGAGATATTGATCTCTCCTTTGTTTCCC  595

seq1  TTTTTTGAAATTATACTTTTGCTACATTTCTGTATTAGTTATATCTTTCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAAATTATACTTTTGCTACATTTCTGTATTAGTTATATCTTTCA  645

seq1  TTGCTGACAAAATATTTGACAAGAGCAACTTAGAGAAAGGTTCATTTCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGACAAAATATTTGACAAGAGCAACTTAGAGAAAGGTTCATTTCAG  695

seq1  GGCACAGTGTGAGGGTATTGTTAACATGGGAGAGACAGCACGGGCTTAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTGTGAGGGTATTGTTAACATGGGAGAGACAGCACGGGCTTAGG  745

seq1  AAGATGATGTAGCTGGCCATGCTATGTCCACAGTCAAAAGGTAGAGGGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATGTAGCTGGCCATGCTATGTCCACAGTCAAAAGGTAGAGGGAT  795

seq1  AAATGCTGTTGCTTTGCTGGGTTTTCCTTTTTCTCATTTGATTCGATCAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGTTGCTTTGCTGGGTTTTCCTTTTTCTCATTTGATTCGATCAG  845

seq1  GATCTGCCACCTGTGGGGTGGTATGTGTTCCCTCCTTTTGCCTCTCTGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCACCTGTGGGGTGGTATGTGTTCCCTCCTTTTGCCTCTCTGCA  895

seq1  AACTCCTTGGGAGACATCTCTATCCCTCCTTTTGCCTCTCTGCAAACTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTGGGAGACATCTCTATCCCTCCTTTTGCCTCTCTGCAAACTCC  945

seq1  TTGAGAGACATGTCTATCTCCTAGGTGATTCCAAGTCTTGTTAGATTGAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGACATGTCTATCTCCTAGGTGATTCCAAGTCTTGTTAGATTGAC  995

seq1  AATGAAGATTAATCATAACAGTCTAAGAAATTTTCATCATCTTACTTTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGATTAATCATAACAGTCTAAGAAATTTTCATCATCTTACTTTAA  1045

seq1  TTACTTGGGAGTGTTCCTTTCTATCTCCTGTAAAGTCCTTCATGTGCAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGGGAGTGTTCCTTTCTATCTCCTGTAAAGTCCTTCATGTGCAAG  1095

seq1  GCAGATGAAGGACTAAATATACCTTAATGTGACACAGAGGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGAAGGACTAAATATACCTTAATGTGACACAGAGGAATTC  1140