BAC Information

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BAC

Clone NameB6Ng01-320I11
Chromosome4 (Build37)
Map Location 78,296,280 - 78,297,423
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320I11.bB6Ng01-320I11.g
ACCGA109873GA109874
length1,1531,159
definitionB6Ng01-320I11.b B6Ng01-320I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagagcattctccaatcgtttcatagcaacttcatttatttgtt
tttccattttttattaggcgttcccctgtactggggcatataaagttttc
ttgaaatgatgtaaatgtttcatacatgtaacacaagtaggggacatgag
taagtgattattaaagcacaacctgagcagaaaagctgggacagggtcct
atgagcctacatctgcagtcaggagggggagctgctcctcagtcctctgt
gtaccttccctgccagaggagagcttgcctctggggagtgctttgaccca
gggactcaggtgagattgccattatttctctgatgaccctctaagacagg
tccactcaggagtgcacaggctgtggaagcagcagagcagctgggacagg
gtccaactggcctacttacacagccaggaggtgcggcttttccatagccc
tctgtgcactggtcttgccaagagagagctggtctcccagtagtgctgac
acaggcttacagactcataggagcaacaagctccactcaaagacagcaaa
aacatctaacaccagagattaccagatagggaaaggcaaatgcaagaatc
ttaccaaaagaaaccaaaactactcggcatcacctgcactcagtactttc
accgctgagagtcctggatacccaaacacactggaaaagcaagattcaga
tttaaaatcatatctcatgatgctggtagaggattttaagaaggacataa
taatcaaaataccaaatgcactaaagaaagatagaatatttaaagcagca
agggaaaaagttcaagtaacatataaaggcagacctatcagaattacaca
agacttcttgccagagactatgaaagccagaagatcctgggtagatgcca
tacagaccctaagagaacaaaatgccagcccaggctactatacccaccaa
tcctcttaatttccatagacagagaaaccaaggtatttcatgaaatacaa
atttacacatatctcacattcagctttcaaagggatatgaaacccacaca
gaggagccacactagaatagcagaaaatatctttttacaccaaaggatta
ggctcacgactagtaatcctatctcaattaacgagcacatcacgttcctt
tga
gaattccacctttctgtttagactacatccccagtgaatgctcattgctt
tccaaaatcattttgtttttaatctgattttcaggcttaagattgtactg
aaatacttaattaaatttttcaagtcaactttacaagctggatagattta
aaattctttttaatctcaaagccatcagtactgcttgttccaagttgagc
tctaaaattcctggagacctcttcaggttgctgagtgagatcgtgaggag
ctctacctcctctacctagacacaaaaacatggacatcgcctaggcaaga
gtgtggatacagagaaagggaattcacatatactttttgttgaaacttat
gttagtgtggtcattgtagaaacagcataggtagcttttgaaaactgaaa
ctggaagttccatgagacccaactccatcattcatttgcagagaatgaaa
gcaatgaattgtgtagaagaatgacatactaaaatcaatattaaggatag
gaggcagtaggattttcaaggagtccaataatgtaaaacaggataaaatt
agtgggaggaattaattatagtgcattgtacaacatatagttaatatgtt
gggtaatgatatagaatatacttcaaaataactctaaaaagacttctaag
cttctaaacatgtaaaaatgatcaacgttcaaggagaaaaataactaata
taatgatttgattattatgtacagtgtataacaagtgaattattatatta
taccctaaaatatgtatgcacagaatgcatgtcaaatatatatattcatt
taaaatattatttatgtccgttttttttaatttattatggggaatattac
cataattttagagatttttttggaatcatactaaaggaggtttgaatatt
tttgagctagtaacaatttctttttactttctttgctcagatacaaatgt
gtatcatagaactatgccagctggggggaaggggggtggggactcctcta
tgatatactccatttacattggatgatatttcagttctctggtatcatgt
agtcaggttcacaatgggggttttcatcatttggaacactggtaggtctt
gggagccctatattggatgtcacttaaaataaagggtgtaggcttgaagt
ggtgtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78296280_78297423
seq2: B6Ng01-320I11.g_66_1224

seq1  GAATTCCACCTTTCTGTTTAGACTACATCCCCAGTGAATGCTCATTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTTCTGTTTAGACTACATCCCCAGTGAATGCTCATTGCTT  50

seq1  TCCAAAATCATTTTGTTTTTAATCTGATTTTCAGGCTTAAGATTGTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATCATTTTGTTTTTAATCTGATTTTCAGGCTTAAGATTGTACTG  100

seq1  AAATACTTAATTAAATTTTTCAAGTCAACTTTACAAGCTGGATAGATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTAATTAAATTTTTCAAGTCAACTTTACAAGCTGGATAGATTTA  150

seq1  AAATTCTTTTTAATCTCAAAGCCATCAGTACTGCTTGTTCCAAGTTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTTTTAATCTCAAAGCCATCAGTACTGCTTGTTCCAAGTTGAGC  200

seq1  TCTAAAATTCCTGGAGACCTCTTCAGGTTGCTGAGTGAGATCGTGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATTCCTGGAGACCTCTTCAGGTTGCTGAGTGAGATCGTGAGGAG  250

seq1  CTCTACCTCCTCTACCTAGACACAAAAACATGGACATCGCCTAGGCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTCCTCTACCTAGACACAAAAACATGGACATCGCCTAGGCAAGA  300

seq1  GTGTGGATACAGAGAAAGGGAATTCACATATACTTTTTGTTGAAACTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATACAGAGAAAGGGAATTCACATATACTTTTTGTTGAAACTTAT  350

seq1  GTTAGTGTGGTCATTGTAGAAACAGCATAGGTAGCTTTTGAAAACTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGTGGTCATTGTAGAAACAGCATAGGTAGCTTTTGAAAACTGAAA  400

seq1  CTGGAAGTTCCATGAGACCCAACTCCATCATTCATTTGCAGAGAATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGTTCCATGAGACCCAACTCCATCATTCATTTGCAGAGAATGAAA  450

seq1  GCAATGAATTGTGTAGAAGAATGACATACTAAAATCAATATTAAGGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAATTGTGTAGAAGAATGACATACTAAAATCAATATTAAGGATAG  500

seq1  GAGGCAGTAGGATTTTCAAGGAGTCCAATAATGTAAAACAGGATAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTAGGATTTTCAAGGAGTCCAATAATGTAAAACAGGATAAAATT  550

seq1  AGTGGGAGGAATTAATTATAGTGCATTGTACAACATATAGTTAATATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGGAATTAATTATAGTGCATTGTACAACATATAGTTAATATGTT  600

seq1  GGGTAATGATATAGAATATACTTCAAAATAACTCTAAAAAGACTTCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATGATATAGAATATACTTCAAAATAACTCTAAAAAGACTTCTAAG  650

seq1  CTTCTAAACATGTAAAAATGATCAACGTTCAAGGAGAAAAATAACTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAACATGTAAAAATGATCAACGTTCAAGGAGAAAAATAACTAATA  700

seq1  TAATGATTTGATTATTATGTACAGTGTATAACAAGTGAATTATTATATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATTTGATTATTATGTACAGTGTATAACAAGTGAATTATTATATTA  750

seq1  TACCCTAAAATATGTATGCACAGAATGCATGTCAAATATATATATTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTAAAATATGTATGCACAGAATGCATGTCAAATATATATATTCATT  800

seq1  TAAAATATTATTTATGTCCG-TTTTTTTAATTTATTAT-GGGAATATTAC  848
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TAAAATATTATTTATGTCCGTTTTTTTTAATTTATTATGGGGAATATTAC  850

seq1  CATAATTTTAGAGA-TTTTTTGGAATCATACTAAAGGAGGTTTGAATATT  897
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATAATTTTAGAGATTTTTTTGGAATCATACTAAAGGAGGTTTGAATATT  900

seq1  TTTGAGCTAGTAACAATTTCTTTTTACTTTCTTTGCTCAGATACAAATGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTAGTAACAATTTCTTTTTACTTTCTTTGCTCAGATACAAATGT  950

seq1  GTATCATAGAACTATGCCAGCT-GGGGGAAGGGGG--TGGGACTCCTCTA  994
      |||||||||||||||||||||| ||||||||||||   ||||||||||| 
seq2  GTATCATAGAACTATGCCAGCTGGGGGGAAGGGGGGTGGGGACTCCTCT-  999

seq1  ATGATATACTCCA-TTACATTTGATGATATTTCAGTTTCCTCT-GTATCA  1042
      ||||||||||||| ||||||| |||||||||||||||  |||| ||||||
seq2  ATGATATACTCCATTTACATTGGATGATATTTCAGTT--CTCTGGTATCA  1047

seq1  TGTAGTCA-GTTCAC-ATTGGTGTTTTCATCATTTGAAACACTGTTAGGT  1090
      |||||||| |||||| || || |||||||||||||| ||||||| |||||
seq2  TGTAGTCAGGTTCACAATGGGGGTTTTCATCATTTGGAACACTGGTAGGT  1097

seq1  CTT-GGAG-CCTATATTTGGATGTCACTAAAAATAAA-GGTGTA-GCT--  1134
      ||| |||| |||||| |||||||||||| |||||||| |||||| |||  
seq2  CTTGGGAGCCCTATA-TTGGATGTCACTTAAAATAAAGGGTGTAGGCTTG  1146

seq1  ---TAGTGTGTCT  1144
         | ||||||||
seq2  AAGTGGTGTGTCT  1159